Os06g0604500

From RiceWiki
Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0604500| Description = Mitochondrial substrate carrier family protein| Version = NM_001064553.1 GI:115468837 GeneID:4341470| Length = 6410 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0604500

Description

Mitochondrial substrate carrier family protein

Version

NM_001064553.1 GI:115468837 GeneID:4341470

Length

6410 bp

Definition

Oryza sativa Japonica Group Os06g0604500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24812987..24819396

Sequence Coding Region

24813092..24813569,24815823..24816608,24816700..24816790,24816869..24817061

Expression

GEO Profiles:Os06g0604500

Genome Context

<gbrowseImage1> name=NC_008399:24812987..24819396 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24812987..24819396 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccggcgcggcggtccacgcggtggacccacggggcggcgcctccccgccccccgtcgccaaggcggaggcggcgacggctgcagcggcggcggcgggagggtgcgagccggcgcggaaggcgggggcggtgaccatggagcacgtgctgctggcgctgcacgagacggaggcggagagggaggcgcggatccgggagatgttcgccttcttcgacgtggacgggcgcgggcagctggactacgcgcagatcgaggccgggctcgccgcgctgcagatccccgccgagtgcaagtacgcgcgggagctgctccgcgcctgcgaccgcgaccgcgacggccgcgtcgggtacgacgacttcaggcggtacatggacgacaaggagctcgagctctaccgcatcttccaggccatcgacgtcgagcacaacggctgcatcctccccgaggagctctgggacgcgctcgtcaaggctggtatagagattgatgatgaggagcttgcacggtttgtcgagcatgtggacaaggacaacaatggaattattacttttgaagagtggagggactttcttttgctatatcctaatgaagtaaccattgagaatatttatcatcactgggaaagagtatgtcttgtagatataggtgaacaggctgttataccagaaggcataagtaagtcggtcaatgcaagtaaatatctgattgcaggagggattgcaggtgctgcatctcgtactgcaactgcacctcttgaccgccttaaagtgatcatgcaagtacagactacacgaactacagtcatgcattcaattaaggatatatggagccagggtggcatgttagcattttttagagggaatggattgaatgttgtgaaagttgctccagaaagcgcaataagattttatgcctatgaaatgctgaaagaatatattatgaagagcaaaggagaaaataagagcgaagttggtccttctgaacgtcttgtagctggtggtttggctggtgcagtagcacaaacagcaatttatcccgtagatttagtgaaaacacgactgcagacttattcatgtgtggatggtaaagtacctagtcttggtgcattgtcaagggatatattgatgcacgagggtcctcgagcattctatagaggtctggttccatctttgcttggtattgtcccttatgccggaattgatcttgctgtatatgagacattgaaagacgtatccaagacatatatcctgaaggatagtgatcctggtcctctagtacaactgggctgtgggactgtatcaggagccttgggggcaacatgtgtttaccctttacaggttatcaggacaagactgcaagctcaacgagccaattcagaatctgcatatagaggtatgtctgatgtattctggagaacgctacagcatgagggtgtttctggattctacaaaggaatcctaccaaatcttcttaaagtggtgcctgcagcaagtattacctacctagtgtatgaagcaatgaagaaaaatctctcccttgattga</cdnaseq>

Protein Sequence

<aaseq>MPGAAVHAVDPRGGASPPPVAKAEAATAAAAAAGGCEPARKAGA VTMEHVLLALHETEAEREARIREMFAFFDVDGRGQLDYAQIEAGLAALQIPAECKYAR ELLRACDRDRDGRVGYDDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAG IEIDDEELARFVEHVDKDNNGIITFEEWRDFLLLYPNEVTIENIYHHWERVCLVDIGE QAVIPEGISKSVNASKYLIAGGIAGAASRTATAPLDRLKVIMQVQTTRTTVMHSIKDI WSQGGMLAFFRGNGLNVVKVAPESAIRFYAYEMLKEYIMKSKGENKSEVGPSERLVAG GLAGAVAQTAIYPVDLVKTRLQTYSCVDGKVPSLGALSRDILMHEGPRAFYRGLVPSL LGIVPYAGIDLAVYETLKDVSKTYILKDSDPGPLVQLGCGTVSGALGATCVYPLQVIR TRLQAQRANSESAYRGMSDVFWRTLQHEGVSGFYKGILPNLLKVVPAASITYLVYEAM KKNLSLD</aaseq>

Gene Sequence

<dnaseqindica>106..583#2837..3622#3714..3804#3883..4075#ttcccattccattccccaaaccaacccaacccaccaccaccaccaccggcgccgccgccgccgccgcctccccctcacccccattccttcctcgccgccggcgccatgcccggcgcggcggtccacgcggtggacccacggggcggcgcctccccgccccccgtcgccaaggcggaggcggcgacggctgcagcggcggcggcgggagggtgcgagccggcgcggaaggcgggggcggtgaccatggagcacgtgctgctggcgctgcacgagacggaggcggagagggaggcgcggatccgggagatgttcgccttcttcgacgtggacgggcgcgggcagctggactacgcgcagatcgaggccgggctcgccgcgctgcagatccccgccgagtgcaagtacgcgcgggagctgctccgcgcctgcgaccgcgaccgcgacggccgcgtcgggtacgacgacttcaggcggtacatggacgacaaggagctcgagctctaccgcatcttccaggccatcgacgtcgagcacaacggctgcatcctccccgaggagctctgggacgcgctcgtcaaggctggtatgtatgcgctcgcctcaccttcaccctcaccttccgcagccattgatcgcctccttcccgtgctgtcacacgtcgctccgctgtccgtattctgacgtgttcggcgaaatgtggtttcaaacgcattattactttacttgattgttgctggatgctcgtggtgaatttgtagccatacattggaattgttccttttttttggttttggtttactcgatgggtagatgtgtgttgtaatgtttgaagacgggaagaagtccttatgcggcgaacaatgtactgataccaatggagcttaatggtacttgtagggaacattcaataaggcggtaggcactagatggtcggcatgtccagtacctaggtccaacgcgactagtgaaaccaagcaattagtgagcatatcacataaaagttaagacaatagaacactaaaatatgagcacaagagccctcaaggatagttcggttgactaaagcaccatataatgcctaattggtgcggccaccgggcacctagcgcccaatagtcacctaggtggtacactggtacctagcctagggctgagttttagaacagtgtcatctactgacattgagtagtggaaccttgggagcatctgaaaattttcagttaacatgctactagattttgtccattttcccacaatatttgaggaaggattgagcctaaccacttagtagtggcatgactatgatcctacgggatcacgtttcactagtgcaatgtgaacttggatctctgaaatcattttcctatcagtattgcatattattgcctgctgaatgtaattattctgtagttagattcactggaactagggctgatcaacataagacattgtatttgccatcacatcaaacaggataagccttgtatttgccaccgctcacaggttttcatattaggtgttcatctaccatatataagtgttgaagctcatagaatccaatcctattgatgcgttgcatttgtcctaaatcctctcttgttaagcagttccacatattgagttccatattttattagattcattacaataacctgcttccactgaataagttgaattggttcctcattttttgactgattaatgttggattttatgcttcgttaatcttgtgatatatagttatgagagcaaatatatagcctcaaagacttatcagtttcttgttagatattagattgtcacagagtccaaaaactggaggcagtttaagagtgcaaacgttttagttattttccttattccctgttcaaggcgaactctattagtttcagaagactgaatcccttattgatacagcatatagatccaagactatgttcccatactaagactttcgtagtataggcaaccgaatttgagtgcctcaggtgaagtcgaagcattctcacatgataaaatcacttcaagaaggtggctgaagcagcttccaatcaattgggcccaaacttttggccttgcataattagtgaaagatggccatggtgagtaccatgttcctttttcaaattttagcacggggtatatgaattcgatttagaggtaattgtagctggccaatgcattatctaagtggaattccttaaggtgaatttaggtaggcggtatatttatgatttgttttgaactggtacggagtaacatactagcttgacttgagaactaataatgataaaactggtatatcagctataccttctcatgccaaagcttgacgtggatgatttttgtaatagaatatttctcaaaaggctgagaagaaagattaaatgtggtagggcggtctttgttcaggaagttttttttgcattgaacatttagttaagatggttttaatttcaaccatatcacggagcaattcatattagattacaattcttcattcagagttgaaaacactatcatcttaagttcttaacttcatgtgatcatatttttgtctcaagtatgaccaaaaataattttctttcctatggatgttgagcttgcaggagagcacaatctgactttgcattatttagctataccttattaatttatggtatcttctaccaaaaatataccttctgtcaaatttaaaaaagcatacacattgtttgcttccttggttctgctttgcctgaagtcttaaatatattcatagttgggttatttagagattttattgtttgcacatccataatatatcttacaagcaatgtcagcttgttgtttgcaggtatagagattgatgatgaggagcttgcacggtttgtcgagcatgtggacaaggacaacaatggaattattacttttgaagagtggagggactttcttttgctatatcctaatgaagtaaccattgagaatatttatcatcactgggaaagagtatgtcttgtagatataggtgaacaggctgttataccagaaggcataagtaagtcggtcaatgcaagtaaatatctgattgcaggagggattgcaggtgctgcatctcgtactgcaactgcacctcttgaccgccttaaagtgatcatgcaagtacagactacacgaactacagtcatgcattcaattaaggatatatggagccagggtggcatgttagcattttttagagggaatggattgaatgttgtgaaagttgctccagaaagcgcaataagattttatgcctatgaaatgctgaaagaatatattatgaagagcaaaggagaaaataagagcgaagttggtccttctgaacgtcttgtagctggtggtttggctggtgcagtagcacaaacagcaatttatcccgtagatttagtgaaaacacgactgcagacttattcatgtgtggatggtaaagtacctagtcttggtgcattgtcaagggatatattgatgcacgagggtcctcgagcattctatagaggtctggttccatctttgcttggtattgtcccttatgccggaattgatcttgctgtatatgagacattgaaagacgtatccaagacatatatcctgaaggatagtggtgagcctccattcagaaactgtttctgtttcctacccttttgcttttcaactccgtttcttgattcttgaattttatcatggttgtgtagatcctggtcctctagtacaactgggctgtgggactgtatcaggagccttgggggcaacatgtgtttaccctttacaggttatcaggacaaggtaagaatgcattgtcgacttgtaaagaaaagaagcaaacacacactctttctcaacagtacttttaaatctttgtagactgcaagctcaacgagccaattcagaatctgcatatagaggtatgtctgatgtattctggagaacgctacagcatgagggtgtttctggattctacaaaggaatcctaccaaatcttcttaaagtggtgcctgcagcaagtattacctacctagtgtatgaagcaatgaagaaaaatctctcccttgattgaattacggagctgtttggcaaatcggccatcatttattgacatggctgactgtagagataatgacgatacatgattttactggttaagtagctacttttttgaagtgcaagacggtgccttcaggacagaatttgaagctatggtggcatctctcttaattttcatttcccagaaatgaagcgataaccatcagatcattgagacatctttgctggcgtactggtacaattcctaactgtcatgttatatcacaacagttatacttgacatgcccttctgttctttataacaactcctttttgtacatacacaactactttatgctgctgcacatacttggaagtgaatagtgaacaacatagcttatattagcagccacagcgactagagctgatgatgtttcttaggagttagcttatgtaattatgcttaatcagcaagcttgaaaactgagcattttgtcctttttttcccttgatcctgtgacagagaaacccagtgggtactggaagctaaatgcctaaaatttgctgatcctggtgtacagtttaactgtgctcatatggatagttaatactctataatactttagtcttctagaagtggaacatactgtaagagacagctatcgtatgcataactttttttttgtatcatagctgaatacaccttggtatcatgaatagacttcaaaaaaagtgaaagacttgaaaaggactatgttaatactttagtttattatttagttaagctgcaggatattcagaggtatgagtatggacccagtataagttaaatgtgtgtgcatattaatggccaaagtaagatcgaatttgactgatactagatctggaatcaaatatgttaatggccaaagaacctgaaaggtacagacggaaatccattccatactgtttttgcagctaaatctgcttgctcgtcctcctcctccgatcttgtctattacattaatgcacacaagagagcgtctaaacattaggacatttcaatttcattatatgtgccaatcacggaatcacctgccgtggaagtgactaaatatttttttttcctgttaataatatttgtatgtcctggaatatcaatgggatcagttctgtttggaagcatgatctctatatgactttataaggtgatgaaatgaaatgttgtttgctttgaatgaagaaacattattaacttgtatagaatagttagcttgaaacgttatgagatttgtggtctattttgtctccttgaaaaccgtatgtataagtggtacttctgttctagatgccctggtacttcaaaataataggaataaaaacaacaatttaattatcttttctttgttatgagccttgattccagatttcaggacttgggagcattgccgtggcaaactagtactaagtatgcccagagtttaacgaatcttagtttgtactcattgtcccatacaattcatgcaactgataacaaatatgcttgttgaaatctgtcgaatatacagctggctcttttcatgtgtcaggttctaattgtattattggagccaacttcatagcattactgcaatattgtttgccaatagtttcaattccactccaaatgaactatgttacctactctctctgtccacaaatataaggggattttagctatgcacctgggagcacttgtccatgtatatagtcaaaataccttatatgtggacggagggcctgatccttggtgaattatgatactgttctaattcaagagttagtttatgaacatgataatttgttcagttatttaaacttgtaactcatgttctcacagatctggacaaattctcttctttatgactcatttcctttacttttgacatttcagtaaggcatcgtttgctccgagttagctggtcctcgtgaattcctgaaggcttattttgcccctgtcctggggtgagttttgttagtcaaactgtaaaacacaggaaaacactctttaacttaatttaccattccttgtgctcctgaaattaaagaggagcttgacctttactgacgacgaaattgccctgcagaaagggtgctggttatacatgcctgtattgccccttggctacatgccaaaaaagtcaatgcctactgtatgtaataatctgccagctttaccaatataacttccttatggttaccctgttaaatgaatacgcaaatgacccggtgagcagtgtaaagacggtaaaatgcccctcaaattgtatgtgtacatgtatatatatgtgcttagaagttagaagttgatccctttctggactgcttacatggcagtcttctcttgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0604500, RefSeq:Os06g0604500