Os06g0605100
| Gene Name |
Os06g0605100 |
|---|---|
| Description |
Zinc finger, BED-type predicted domain containing protein |
| Version |
NM_001187963.1 GI:297725056 GeneID:9272070 |
| Length |
5720 bp |
| Definition |
Oryza sativa Japonica Group Os06g0605100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:24845212..24850931 |
| Sequence Coding Region |
24845212..24845537,24845931..24846431,24846570..24846752,24846869..24846998,24847094..24847252 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:24845212..24850931 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:24845212..24850931 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatttggacctgctaccacgtgatacaagtaaagcagtagtcgctgccgcagccacacccaatgttgggcatactgccgtatccgccgccgtgctgggtgctgcccctgcggtcgtcgcattgggtgcagcccctgcggtcgtcgggttgggtgctggctcctctcgcaagtccaatgcaaatgcccttcgcaggcctcctcctttgaaaaggaccacatccaagccgaaaagccatcttgcagctgttggagctccttctgcaccgactactctaaacacgtcatcttttgccggcggccttcgtctattaaaatccatgggattcacatcgaagtcaactgcgggtagtgcgaatagaagccagcaagactcgcaatcacttccacctcacgatgagagtgttaatgattctcagccaatacaaggtgatgatgatgaagatgaggctgaggaggaggatgtggactttggcaccaagaggaagcttacttctatcgtttggaaggatttcaagaaagtaaaaatctgtggtaaagtcaaggctcaatgccttcattgccacaagcggcttggagggaaaagcagtaatggaacaagacatctccatgaccatttgaaaatttgcacattgaaaaagatcaagatggcgggacaaaacaagacacttgcacagtcttctttaaggttcaattcccaggagggaggaaaaatatctgtggagaagtacacatttgatccacaaatagctaggagagagcttgctgccatgattgtactacatgagtatcctttatctattgttgatcatattggatttcaaaggaaggacattatggactattacatggaagaaaataagaaagccctagcctacatggctggaactaagtcaagagtggctattactacagacttgtggacatctgataaccaaaaaagagggtacatggctgtcacagcccatttcattgatgattcttggacacttagaagcattatcatgaggttcatatatgtgcctgctccacacacaactgaagttatatgtgaacaactttatgaagcattggtggaatggaatcttgatgagaagatctcaaccttgactcttgataattgtaccacgaatgacaaggtatcggagatgaagataaaatcgaagcggaatccaagatggagatcgttccagaagcggagcaagaatcggctgaagtccgaatcggctacgatcaggatcggtagagttcgagtcggacaaggttgccgattaagccgattccgacaatgtgattcggatggtatagaggtgataaaatattcaattgcaaaaatccgtgaaagtgttgctttttggacagccacgcctaagagagtagagaaatttgatgaaattgctaagcatgttaaagttaaaatggatcacaagttaggccttgattgcaaaactaggtggagttccacctacaagatgcttagcattgctttaccttatgcacatgcttttgatcgtgcaaaacatgttgagaagctctttgattgtgcccctagtaaagatgaatgtgcttttgctgtagaggtagttaataggctcaagttgttcaatgatatcacagaagtgttctctggaactaattatgtgactgccaatgtccaactcttgaaaatttgtggggctaaagagcaaattaggcactttgtcgacaacagtgtcaacaccaacctcaaccaaggagttcctacttcaacaacactggtgtggactcaggtcggcgaaatcgtctttccggtttacaccacagtgccgatctcagctggtccgccaatggccggaaacgagaatgcagtggctacaacccagggcgactccatgtcgaaggatcctcccgccgaagcggagataggaacgtcgacaacatccgagcccgagaaggatcctagtgcggccaagccttgtctttccgacaggaatcacgagccgacgaggattacttccgaggtgacaaggtcctggtgtcctatccacaaaaccaggaaacacaccctgcaagcctgctgggtctttctcaacgtccatgctgaaattcgtgcctgcaaagagcgtggaattcagcgtacctctccaactcgtgatgtctattgtccaattcacaagacaaagaatcacaacctctcgagctgcaaggtctttctcagcgccatgaagacgccaccttctaaggtccagcagtcacgcatccccatcagggatgaacacaaggaacaaggagcgacgctgatttcagatcgattcgttggggtaatcgacatagatccccacgaaccatcagtcttgcacctgctcgaagactatggatcatcgacaacgagtacgccgcgtgaggtattggctatcgacgatgtcggcacatcagcgcgcaccaatgcggaagcggaaaatcaagcgactacactggcccagcacatcagagccgtcaacgcaatactgagggaaaccccctacgatcccattctgaacgacgatctcgcacgatggacagaacgactacgggaatcagtgaccaacctcagcaacgcgttcaaagaagccgctgctgcagtgcacccagaacagccaccaactggcgatgctaatggtgaagatcctgaacaccgggaattgcctcatcgagccaccccttcacctcgcggcaccggcgatctccgcgatcacctgaatggccgccgagaggcgcgacgcacaagtgacaacgagaaccgttctcaacatcgcatctcttcacgacgtcacgataacgaagatcgaggaggccgttcaagcgaagaccgaggccatgataaccgccacaaccgctgcgatcatgacgatcacgaacggcgggtgctgggcgatactggtcgaggacgtcgccataatgacgacgatgatggagatcggcgccgagacaacaacgggcgacgacaacaaggttctcgagaacccggccgacgtcctcgtaaccgcacgccggaaccgagcgacccatcatag</cdnaseq> |
| Protein Sequence |
<aaseq>MDLDLLPRDTSKAVVAAAATPNVGHTAVSAAVLGAAPAVVALGA APAVVGLGAGSSRKSNANALRRPPPLKRTTSKPKSHLAAVGAPSAPTTLNTSSFAGGL RLLKSMGFTSKSTAGSANRSQQDSQSLPPHDESVNDSQPIQGDDDEDEAEEEDVDFGT KRKLTSIVWKDFKKVKICGKVKAQCLHCHKRLGGKSSNGTRHLHDHLKICTLKKIKMA GQNKTLAQSSLRFNSQEGGKISVEKYTFDPQIARRELAAMIVLHEYPLSIVDHIGFQR KDIMDYYMEENKKALAYMAGTKSRVAITTDLWTSDNQKRGYMAVTAHFIDDSWTLRSI IMRFIYVPAPHTTEVICEQLYEALVEWNLDEKISTLTLDNCTTNDKVSEMKIKSKRNP RWRSFQKRSKNRLKSESATIRIGRVRVGQGCRLSRFRQCDSDGIEVIKYSIAKIRESV AFWTATPKRVEKFDEIAKHVKVKMDHKLGLDCKTRWSSTYKMLSIALPYAHAFDRAKH VEKLFDCAPSKDECAFAVEVVNRLKLFNDITEVFSGTNYVTANVQLLKICGAKEQIRH FVDNSVNTNLNQGVPTSTTLVWTQVGEIVFPVYTTVPISAGPPMAGNENAVATTQGDS MSKDPPAEAEIGTSTTSEPEKDPSAAKPCLSDRNHEPTRITSEVTRSWCPIHKTRKHT LQACWVFLNVHAEIRACKERGIQRTSPTRDVYCPIHKTKNHNLSSCKVFLSAMKTPPS KVQQSRIPIRDEHKEQGATLISDRFVGVIDIDPHEPSVLHLLEDYGSSTTSTPREVLA IDDVGTSARTNAEAENQATTLAQHIRAVNAILRETPYDPILNDDLARWTERLRESVTN LSNAFKEAAAAVHPEQPPTGDANGEDPEHRELPHRATPSPRGTGDLRDHLNGRREARR TSDNENRSQHRISSRRHDNEDRGGRSSEDRGHDNRHNRCDHDDHERRVLGDTGRGRRH NDDDDGDRRRDNNGRRQQGSREPGRRPRNRTPEPSDPS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..326#720..1220#1359..1541#1658..1787#1883..2041#3329..3726#4350..5681#5717..5720#atggatttggacctgctaccacgtgatacaagtaaagcagtagtcgctgccgcagccacacccaatgttgggcatactgccgtatccgccgccgtgctgggtgctgcccctgcggtcgtcgcattgggtgcagcccctgcggtcgtcgggttgggtgctggctcctctcgcaagtccaatgcaaatgcccttcgcaggcctcctcctttgaaaaggaccacatccaagccgaaaagccatcttgcagctgttggagctccttctgcaccgactactctaaacacgtcatcttttgccggcggccttcgtctattaaaatccatggggttcgatttcaagcacgctacccctcttatatgtttcagctcttttatttaacaatttggaatatgtaagttggagtttatgacttatgagattgcattgcacttaggtactgaatgtttcagctcttaggtactaaatgatggatttgttgatgttactgtcatatattttctttgcaaattgaagggatatttctttgcacgttactgttatatattttctatatttatacttatgtacatgcattattgtttggtgatttatagtgctatgcaggtatgcgtcaacatggtctgaactttaaatttgctttcacagctttgtaaagggatttcagtatgttactaggccattgaataaattttgaactgaatttatttctctcttctcagattcacatcgaagtcaactgcgggtagtgcgaatagaagccagcaagactcgcaatcacttccacctcacgatgagagtgttaatgattctcagccaatacaaggtgatgatgatgaagatgaggctgaggaggaggatgtggactttggcaccaagaggaagcttacttctatcgtttggaaggatttcaagaaagtaaaaatctgtggtaaagtcaaggctcaatgccttcattgccacaagcggcttggagggaaaagcagtaatggaacaagacatctccatgaccatttgaaaatttgcacattgaaaaagatcaagatggcgggacaaaacaagacacttgcacagtcttctttaaggttcaattcccaggagggaggaaaaatatctgtggagaagtacacatttgatccacaaatagctaggagagagcttgctgccatgattgtactacatgagtatcctttatctattgttgatcatattggatttcaaaggtttgtgactgcacttcagccattatttaagatggtgactcgaaacactattaggtaataatgatatctattagtttcagttgtctattaaaaatatctgcaattaagaagaaaaaattaacatttatgcatttttaggaaggacattatggactattacatggaagaaaataagaaagccctagcctacatggctggaactaagtcaagagtggctattactacagacttgtggacatctgataaccaaaaaagagggtacatggctgtcacagcccatttcattgatgattcttggacacttagaagcattatcatgaggtacttgatgaacaattaatttcatttcctactgctacatatttaattcagcatgacattagatttcatttttgcatcaatctgaatttaatctaggtttaactttgattgtataggttcatatatgtgcctgctccacacacaactgaagttatatgtgaacaactttatgaagcattggtggaatggaatcttgatgagaagatctcaaccttgactcttgataattgtaccacgaatgacaaggtaatcactgaacttgggaagaagattggcaagtctaagttgatgttggagggaaaattgttgcatattgttaacgaccaaatttggttatttaggtatcggagatgaagataaaatcgaagcggaatccaagatggagatcgttccagaagcggagcaagaatcggctgaagtccgaatcggctacgatcaggatcggtagagttcgagtcggacaaggttgccgattaagccgattccgacaatgtgattcggtacacgttgtcgggttgagttaatgtgcttcatgaggattgccatgcatggattgagtcctgaaaaggtaattgtatctattaattagggtatttcatgtaatttccttagagataagtttgggcaaaagtctgccgcaaagacttatggtatcttagagtttgttagagatgagagtcgtgtccgacatggacatattttgtaatctcgggtataaatagaccccgagccccatgtaatacaacaacacacgttcaatacaatctcggcgcatcgccaccctttacttttgttttttttcgacaagttcttgctttcgggttgagctgcatcagtttcgatcttcaactagatgtaaaacttgttatggcgggttgcgttatcgggattagtgcttccatctttatgatactctaatcttgtttatgtaattcgtcgaattatcatatattatgtataatcttcaacaatatcgttatctaaccttcaatcggctaacatctattattggaaggcaaccaatcaggttaaatatctatgttgacttagattatacagggtatctaccactctatgaaacagccaacagcttgattgtctagatattgtccttcttttcatatttatagctgcatcagttgagtttgaccttataagtcgttattaaaatctcaatttctagcctgcttttggttgccgattagggtagtgtcggggtttcagccgatcttacctgatttaactactctatgtcttatatgcttgattgacatgttaaatccgccctttatgttaagatcttgttgccgatacatgctagatctatctaatcggctatgctatgaacatctataatctcattgttattatatatttcgatctaagtgatttatactgtctcggcatggtgaccgatctatcccaatcacttgatttaagtatatatcaacataagaattatatatggttaatatctacagccgatcaagtagatttagttctttcttacttattcatgattgccgatcgattcaaatatgacatcggctcaaagacaaatgatacgtcatcggcggctggtcgatcggctatcgtttatggatttaaccgctattttcctgtctttatttcttgttgattgcatgatcaaatcaactggcacgctcacgaacctaaaggcaagatttttggacctgcactggagttaagcagatctcccaggcctcgtgtttttcacatcaacacatatgcgttgtgctgcccatattcttaacttaattgtgaaggatggtatagaggtgataaaatattcaattgcaaaaatccgtgaaagtgttgctttttggacagccacgcctaagagagtagagaaatttgatgaaattgctaagcatgttaaagttaaaatggatcacaagttaggccttgattgcaaaactaggtggagttccacctacaagatgcttagcattgctttaccttatgcacatgcttttgatcgtgcaaaacatgttgagaagctctttgattgtgcccctagtaaagatgaatgtgcttttgctgtagaggtagttaataggctcaagttgttcaatgatatcacagaagtgttctctggaactaattatgtgactgccaatgtccaactcttgaaaatttgtggggctaaagagcaaattaggcagtgggctgtgtcagggttacgggtaaggtataccctctacccttcgatatacgtcacgtatcgatatggtatgttcacgcgtatacggacgttttcggcatacgttaaggaaattcatcatggagttcacagatggaaggagtcctactcggtcagaactgggtcgtcattgtgtcgtgttcggtccagtctctccgagtccaactgggagacaggtgacctgcgatataaaagggaccccccaggaggacctaaggcatcgaatctcagagccaactccaccacagcctacgaagccggagcttatcggagccaagtcgccgggagatctagtcggatcaactcgactacgatcttgtcggtatcgtcgagttccactgttccctttgtaatctgtggttttcatcatataatcccatatcaactggattagggctattacctaccaaggggcctgaaccagtataatctctgtttcctgtttgcttgatgtcgtactacgtagatcctcgtaccagcgtaccccaataccctctatatccggtctacgggtattccccgtcgacagtggcgtgccaggtaggtggacttggtgctcaaggttctactactatgacatccagctttgtcgacaacagtgtcaacaccaacctcaaccaaggagttcctacttcaacaacactggtgtggactcaggtcggcgaaatcgtctttccggtttacaccacagtgccgatctcagctggtccgccaatggccggaaacgagaatgcagtggctacaacccagggcgactccatgtcgaaggatcctcccgccgaagcggagataggaacgtcgacaacatccgagcccgagaaggatcctagtgcggccaagccttgtctttccgacaggaatcacgagccgacgaggattacttccgaggtgacaaggtcctggtgtcctatccacaaaaccaggaaacacaccctgcaagcctgctgggtctttctcaacgtccatgctgaaattcgtgcctgcaaagagcgtggaattcagcgtacctctccaactcgtgatgtctattgtccaattcacaagacaaagaatcacaacctctcgagctgcaaggtctttctcagcgccatgaagacgccaccttctaaggtccagcagtcacgcatccccatcagggatgaacacaaggaacaaggagcgacgctgatttcagatcgattcgttggggtaatcgacatagatccccacgaaccatcagtcttgcacctgctcgaagactatggatcatcgacaacgagtacgccgcgtgaggtattggctatcgacgatgtcggcacatcagcgcgcaccaatgcggaagcggaaaatcaagcgactacactggcccagcacatcagagccgtcaacgcaatactgagggaaaccccctacgatcccattctgaacgacgatctcgcacgatggacagaacgactacgggaatcagtgaccaacctcagcaacgcgttcaaagaagccgctgctgcagtgcacccagaacagccaccaactggcgatgctaatggtgaagatcctgaacaccgggaattgcctcatcgagccaccccttcacctcgcggcaccggcgatctccgcgatcacctgaatggccgccgagaggcgcgacgcacaagtgacaacgagaaccgttctcaacatcgcatctcttcacgacgtcacgataacgaagatcgaggaggccgttcaagcgaagaccgaggccatgataaccgccacaaccgctgcgatcatgacgatcacgaacggcgggtgctgggcgatactggtcgaggacgtcgccataatgacgacgatgatggagatcggcgccgagacaacaacgggcgacgacaacaaggttctcgagaacccggccgacgtcctcgtaaccgcacgccggaaccgagcgacccatcgtcatcgtcatcatcttcctcatcttcatcatcagatag</dnaseqindica> 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| External Link(s) |
