Os06g0606000

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0606000| Description = Similar to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SE...")
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Gene Name

Os06g0606000

Description

Similar to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein)

Version

NM_001064559.1 GI:115468849 GeneID:4341477

Length

5827 bp

Definition

Oryza sativa Japonica Group Os06g0606000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24915962..24921788

Sequence Coding Region

24916417..24916512,24916722..24916796,24916900..24916956,24917040..24917156,24917941..24918060
,24918146..24918268,24918622..24918711,24918839..24918964,24919464..24919517
,24919602..24919676,24919770..24919877,24920136..24920207,24920328..24920390
,24921505..24921690

Expression

GEO Profiles:Os06g0606000

Genome Context

<gbrowseImage1> name=NC_008399:24915962..24921788 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24915962..24921788 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggggaggagggaatggcggcggggaggaagaagcgggtggggaggtacgaggttgggcggaccatcgggcaggggacgttcgccaaggtcaagttcgccgtggacgccgacaccggcgccgccgtcgccatgaaggtgctcgacaaggacaccatcctcaaccaccgcatgctccaccagatcaaaagggagatatcaataatgaagattgtaagacaccccaatatagttagactaaacgaggttctagctggaaagacgaagatatacataatcttggagcttatcactggaggcgaattgttcgataaaatagctcgccaagggaagcttcgtgaaaatgaagcaaggaagtacttccagcagcttattgatgccatcaattattgccatagcaaaggagtatatcatagagatttgaagcctgaaaacctgcttcttgactcacgtggaaacttgaaagtttctgattttggacttagcactttggcccagaaaggagtaggccttcttcacacaacttgtggaacaccaaattatgttgctcctgaggtgcttagcaacaatggttatgatggatctgcagcagatgtttggtcatgtggtgttattctctatgttttgatggctggataccttccttttgaggaagatgatcttccaacactgtatgataagattactgcaggtcagttttcatgcccttattggttctctccaggtgctacatcgcttatccacagaatactcgacccaaatccaaaaactcgtatcactattgaacagataagggaagacacatggtttaagaagacttatgtagccattaaacgtggtgaagatgaaaatgttgatctggatgatgtacaggctgtttttgacaatattgaggacaagtacgtttctgagcaagtgactcataatgatggtggccctcttgtgatgaatgccttcgagatgattacattatctcaaggtttggatctttcagcattatttgatagacagcaggagtttgtcaaacgtcaaactcgttttgtctcaaggaaaccagcaaagactatagtagctacaattgaagttgttgctgagactatgggtcttaaggtccactctcagaattacaagttgcgtcttgaaggtgtatcttcaaacagaatgagcccgtttgctgttgttctacaggttttcgaagttgctccttctctgttcatggttgatgttcgaaaggttgctggtgacacactggaataccacaggttctacaagaacttgtgcaacaagatggaaagcataatctggagaccgattgaagtttcagcgaaatccgcactgctgaggacagccacatgctag</cdnaseq>

Protein Sequence

<aaseq>MGGEEGMAAGRKKRVGRYEVGRTIGQGTFAKVKFAVDADTGAAV AMKVLDKDTILNHRMLHQIKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGE LFDKIARQGKLRENEARKYFQQLIDAINYCHSKGVYHRDLKPENLLLDSRGNLKVSDF GLSTLAQKGVGLLHTTCGTPNYVAPEVLSNNGYDGSAADVWSCGVILYVLMAGYLPFE EDDLPTLYDKITAGQFSCPYWFSPGATSLIHRILDPNPKTRITIEQIREDTWFKKTYV AIKRGEDENVDLDDVQAVFDNIEDKYVSEQVTHNDGGPLVMNAFEMITLSQGLDLSAL FDRQQEFVKRQTRFVSRKPAKTIVATIEVVAETMGLKVHSQNYKLRLEGVSSNRMSPF AVVLQVFEVAPSLFMVDVRKVAGDTLEYHRFYKNLCNKMESIIWRPIEVSAKSALLRT ATC</aaseq>

Gene Sequence

<dnaseqindica>5277..5372#4993..5067#4833..4889#4633..4749#3729..3848#3521..3643#3078..3167#2825..2950#2272..2325#2113..2187#1912..2019#1582..1653#1399..1461#99..284#attcaggcagcgaagcccccccaaagccgagctcgcgcgcggcggcgtcgtcgtcttcctcctcttccccccgagttggattcgtggccgcgcggcggatgggaggggaggagggaatggcggcggggaggaagaagcgggtggggaggtacgaggttgggcggaccatcgggcaggggacgttcgccaaggtcaagttcgccgtggacgccgacaccggcgccgccgtcgccatgaaggtgctcgacaaggacaccatcctcaaccaccgcatgctccaccaggtaattcccccgcttctcctttcccgctaccctccacatccgcccccgccagtgcacgagtccaaatcaaactcctcgcactcccccctttgctttgatccgggcgattctttttacacttttttttatttgggtgctctccgctgctgctttgctgtttgccaaatggtgagcagccgcgcatcgacgagggcggatggagaatttccgaatatacctcgacagcaatgcgcaccactggttaattcgtgcgagttgcgcgcagctcttgccgtttgatgattaagaataaggaattaactggagagccttaaatttcttgttctcccaaaggggaaaataccttttttttaaaaaaaaaaaagaaaagaaagaaaaacttaattcgagcggtttgtttggtgtttcatctcgtttgggctgacagaagctcagttgcagaattgaaatggttgggtgttgaaagtgattttaccaaaatttggtctgttgtagcttaattcgatttgcggtgtttgcagaaatgctacaaatagttggttcatatggttatccaacgacatcttttgaggatgcatcttgttgcaaagtgctcaagttctctaattatagtggtgtaaatcttttcctaagcttcctgatttgctagttgctatggaacttggtttctctccaattgtgtttgcaattgcaagtatatatttggtttgtttaatataactgttctataatcctaagcctactgctatgccatgaagcttggtttctctccaattgtgtttgcaattgcaagtatatatttggtttgtttaatataactgttctacaatcctaagcctactgctttgccatgaagcttagtttctccccaattgtgtttgcaatttcatgtgtataaatttggtttgtttagtttaactgttctgcaaatcaatgatgaccaccagttttacctgattttgctgtgagcacccatttcagatttccagtttatgcgagatgtactttctttgtgttgtttatgcaatatcgctaatcatgataacaaaaaaaaggactaaaccattctaattcggcattagattacgaactcacttctcatgttacttgacagatcaaaagggagatatcaataatgaagattgtaagacaccccaatatagttagactaaacgaggtatgctaaatatttacttgccatctgtcctatataacttttcattattaacaaaactcctatgttggctatcttaacttcctgtgtcactactttgttaccattactatgattttgtaggttctagctggaaagacgaagatatacataatcttggagcttatcactggaggcgaattgttcgataaaatagtaaggagtctattatatacactaccgaaataacgatgagctgctgttctacttgaactaaaaaaatataagaattgtgccaatctggcagtgtctccatatgtaaattctttttatcacccatatataccagaaactttctgttcagtaaattataggcccattatataatcccaataggcaatataaagaaaggaacatttttttattattgtgcattttcttaaaatatgaacctatgcgatcaaatatctgtaggctcgccaagggaagcttcgtgaaaatgaagcaaggaagtacttccagcagcttattgatgccatcaattattgccatagcaaaggagtatatcatagagatttgaaggtccgttactgataagagacacttggctatcatttgtcctattcactaggtgcaatatctcatgcttaccctttttttgggcatgttatgtagcctgaaaacctgcttcttgactcacgtggaaacttgaaagtttctgattttggacttagcactttggcccagaaagtaagctcagtaattgcttttaatgatgctgtatttctatcctagaagtgttctgattgggatttcttttttgagggatttcagggagtaggccttcttcacacaacttgtggaacaccaaattatgttgctcctgaggtatgatgctctctctctctctatctctcaatgcatggtaaattgaactgtacgaaatgttttttttttggcaaggagctaattgattagctacactacatgcaagaaatatgtctgcaaaattagacgagttactcgggatgcaattcaattttcctagattttctttatagatcatatttgtatgtatgatacaaatgtctgttagactagaaagagattacctatttctttgtttctctacctgtctcgcagttatttggttggttagttctcttcagggttctaaacctcatttttatgcatatttctgccatcatcactaaataaatatctctagctgtcttatttcaccatgttcaagctattgtgattttaattgtctgaactagttcataaaattgtgatatgggcatttcaagccatttccttagacaagattaggggcatttttttagtacatatatgatatgcgctttaccatgtgtcaatgttttaggtgcttagcaacaatggttatgatggatctgcagcagatgtttggtcatgtggtgttattctctatgttttgatggctggataccttccttttgaggaagatgatcttccaacactgtatgataaggtattggcttcattactaatgtgtgcagcataagtctttctttccctaaattgttgatgtgaacacctacataatcgttctactcagatgagattgaaacctgatatgtttactcctacattaaaagattactgcaggtcagttttcatgcccttattggttctctccaggtgctacatcgcttatccacagaatactcgacccaaatccaaaaactgtaagtacacacactaggttgtttcattgcatcttcaagaaacaaatcatcctttatagtaaagtttacctcaagcttccaaagtactcttgtcaccaatttaatacttcagtctcagtctgcatggctgcagaaattatgtgagagaatgcagaaaacaaagactaatttcttcatatcagtgctgccatatatgttacagaaatactgtatacaactatacatgaccagtgacagaatcttgctagaatcaaatctaataagtctaacgcatagatcttcaaccagcatagagtgtttgcttttgcaaattgccgtctccagtttcttaggcctttttcactattttgcagcgtatcactattgaacagataagggaagacacatggtttaagaagacttatgtagccattaaacgtggtgaagatgaaaatgttgatctggatgatgtacaggctgtttttgacaatattgaggtttgtgtatgccattggtatattgccaattgtctgtcacctatttgcttctatagttatatttatacaacttttctggcttcaggacaagtacgtttctgagcaagtgactcataatgatggtggccctcttgtgatgaatgccttcgagatgattacattatctcaaggtttggatctttcagcattatttgatagacagcaggtaatttcatagttccactcttccttttagttggtaacactcttggtatggttgaccattttgctgttggagaaccattagcgcaatgaaatttgaaacgctgatgggtttatagtgtacggagatctggcatgtcagcttatttcatttacttacaaggctgtgaggcactgggtttagtgacggttggtcgctcaggggtttctatcttgtttataataaatgacttaaacgaacatccatttcaattggcgttagtattatgtggaactatattctagccactgtatatggattaaccgactgtagatcgatcccattgtctattctcttttcttatcgcttagtgtactggttggtggcagacggcttctgttttttgccaaatttgaatggaaatggaaaccctgcataaaaggagaaaaaaacatctgattgcttgcttcttagctaatctccatggtttaaattgcacctgtttagtttgtgaagtatttgaccacaccaaccatatattcattctagttgcaatgttctcgtatagcagaaagaagaacccacttttcaatgtttgtgctcttacattagatcttcctagacatgtttagtatgtatttttttattttacgtggaccatacgtcatagtgtgccacacgtcatgaataactttggtgtttgctttatgcattaactgcagtcctcatgaataacttatgttgtctgatgcaactttcatcacatggagtgctcatgttgcaataatgatgggttttatatttgtaggagtttgtcaaacgtcaaactcgttttgtctcaaggaaaccagcaaagactatagtagctacaattgaagttgttgctgagactatgggtcttaaggtccactctcagaattacaaggtaattacaaaacattttcttcaacaagcaactcatttcttactcttgatgtaatgatacttattgctaactcttttctgcagttgcgtcttgaaggtgtatcttcaaacagaatgagcccgtttgctgttgttctacaggtagtcttacattgccctttgttggggaacaacattttgctgtttgtcattcacaaactacatttttcatgctgtcttatgctttgaaatgcatcattcgcaggttttcgaagttgctccttctctgttcatggttgatgttcgaaaggttgctggtgacacactggaataccacagggtctgtctttccacatatcgtcttgtatcctaatcgaatatagtagcatgattgcctagactagttcataaatctaaaaaaatgactgacactgcctgactgacactgataactttcacacaatgtgtcaaaatgctcattcgaaggtgcaacatccaacttttcgtccatccggaacgattgctaactcagatttacactcattgcagttctacaagaacttgtgcaacaagatggaaagcataatctggagaccgattgaagtttcagcgaaatccgcactgctgaggacagccacatgctagcctggcgctaacgcagctgcaactcctgcatcagtgggattttcaggttttcaggttgtcaactcctagcccgtccaccgaagttgctcttgcaggcgctgcatgtaccacatagctgagtcagttcttcagtagatcagtgtaccattctagtttcatgcaccagatgttttggtagtattgttaatatagaactgtagatagtccatatagcggccaattgtgcagtctgtatgtaacatggatatagataggtttcttgtgtagtagtagtaaataagctggttattttgctgccatgaaactggaatgacttgtgaacgtcgaaatgctctcgtgtatgtcggatcttcttcacttagccgttctcaaggatgagagcaattaatcttgtgatataatcctatatgtatttccagggcagaaatggaaaagaaaagggaaacctgcctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0606000, RefSeq:Os06g0606000