Os01g0121100

From RiceWiki
Revision as of 18:43, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0121100

Description

Similar to SLL2

Version

NM_001048408.1 GI:115434229 GeneID:4326040

Length

3182 bp

Definition

Oryza sativa Japonica Group Os01g0121100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1182466..1185647

Sequence Coding Region

1182467..1182545,1182751..1182817,1183024..1183152,1183582..1183716,1184296..1184392
,1184633..1184736,1184924..1184975,1185261..1185458

Expression

GEO Profiles:Os01g0121100

Genome Context

<gbrowseImage1> name=NC_008394:1182466..1185647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1182466..1185647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggctagggctagggtttgaggtcgggcgcgcgcggcatggcggggatacggtggccgcccgaggacccggagatcttcccgccgcctccggccccgccgccgccacgacggcgtcggtcgccgccaacccctccggagatttcagctttgacaaggacgtgccagactccgccgatatggagccgccgttgctgggcctgccgaattatcatcaggatggttcttatgcagaataccttgctaattttcaagaacggagccacacagatgactggtttggcacggagaacatggatgtcctcgtaagctggacgaaaaacttatgttccaacaaggatttgcgtagctgcagtgtactcgacataggaactgggagcggtcgactctcgcaacagcttgcaaagcaagggttctctgatctgactgggatcgaccacagtgaaggtgcaattgaggttgctcgtaatcttgctatccgtgatgggtttgagcacattaatttcttggttgatgatgtgttagagtcaaagttggagaggagatttgaacttgtgatggatgaaggaactctggacacgattgggttgcaccccgatggacctgtaaagagaatgatgtattggcagtcggttgcagggctggtttctcctggtggcatactggtcatcacatcatgtagcagaaccaaggatgagttggtccaggaggtagagagcttcaaccagagaaagctcagtgctatgggctccgaaggtgcgcaggccagtgatactgcggtgttcaagtacatcgaccatgtccaaacgtaccccatcgtggatagttcctgcatcacgaccgttgctttctcgcatagctga</cdnaseq>

Protein Sequence

<aaseq>GLGLGFEVGRARHGGDTVAARGPGDLPAASGPAAATTASVAANP SGDFSFDKDVPDSADMEPPLLGLPNYHQDGSYAEYLANFQERSHTDDWFGTENMDVLV SWTKNLCSNKDLRSCSVLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNLAIR DGFEHINFLVDDVLESKLERRFELVMDEGTLDTIGLHPDGPVKRMMYWQSVAGLVSPG GILVITSCSRTKDELVQEVESFNQRKLSAMGSEGAQASDTAVFKYIDHVQTYPIVDSS CITTVAFSHS</aaseq>

Gene Sequence

<dnaseqindica>2..80#286..352#559..687#1117..1251#1831..1927#2168..2271#2459..2510#2796..2993#agggctagggctagggtttgaggtcgggcgcgcgcggcatggcggggatacggtggccgcccgaggacccggagatcttcccgtcgaggatggtgaccggcggcggcggcgggggcgcgggaggaggaccccccgggcccccgggggagatggcctccgacgacgaccggtcggtggcggcggactcgtggtccatcaagagcgactacgggagcaccctcgacgacgagcagcggtacgccgacgccgccgaggtcctcctcgcctcctcctcctcctcctccgccgccgcctccggccccgccgccgccacgacggcgtcggtcgccgccaacccctccggagatttcaggttaagagcgatccgtttctacggtttaattgctttgttgtgcccgtgatctgatttccttgtgttggggggaagaagaggggggcgttctgtcgcgctgtatcatgcgatttagtccaacgatctctcggtaattacattttagtcctcaagagatgatcatttttggtatgcttacctgactcggcgttgtgaatgtcgaacagctttgacaaggacgtgccagactccgccgatatggagccgccgttgctgggcctgccgaattatcatcaggatggttcttatgcagaataccttgctaattttcaagaacggagccacacagatgactggtcagattcttctcttcacctgctgtgcacatatggatagagtgtagatctcctcatcgaatttttgttgtagctttgttcacaacatgatgggaataacaaggaacataactaagttattgcctcactagggaatgcaaaacacgttagcattatagtaatatctaccaacatgtagtttcgataacagccaatgcctatcgagtgttgtcttctagctaaggttgcctggttcccactgcccattggccaaattaaattcagaacttttagacttgtcttttccctatctactagctactatggatggactacttttttttttgcagcaatgttccattttaagggtaaaaaggcagaaaatcttcattttctgcttcaatcattatatcgctggttatgatgaaagtctaacttgtatgcatgtaggtttggcacggagaacatggatgtcctcgtaagctggacgaaaaacttatgttccaacaaggatttgcgtagctgcagtgtactcgacataggaactgggagcggtcgactctcgcaacagcttgcaaagcaagggtatgttgatgaaatggcaatcttccatttgcatttctccaaccaaaggttactttaatgtgaatgctgttattgttgtcaacttcaatgtattggtgttgagatgcctttcttaacgttttctgacagccctgaaatagacttattgtctattcttttgctcttgcgtttgtgctccttctctcttgtgtttgtgttccttctatataattagagtatgaatttggagttgtaaagtttggtaccataaggcaagtataattgatttagttaagcagacctatcaatttcccaatggtctttctatcacatgcttaaaatctggccatctttgtaaattgaagggagatgccctttgataattattcttggaagctgcatctggtttgctgttaagcaaaggatcatgctagcacagtctcatgttttctttttctcgaatagctatatgttttgtagattgggagaaacatctctattgacttggagtatttttataaattaggagacattcaactatgtatttcactctgttgaattgttaatgcctcttgacagtactgatatgtccatatacaggttctctgatctgactgggatcgaccacagtgaaggtgcaattgaggttgctcgtaatcttgctatccgtgatgggtttgagcacattaatttcttggtgagttgagcactggaccatttggtgcatatgcctgtatctgtatgcttcacaatttcatgttcttattttgctttaacgtataatgtgcacatccatgaccttctggttgtatcttagataccaaaacaacatctttcaaggttgtacagctaattatcaactcccttgaacaaagagctttaaagcggaaagaggaggaaagagctgattcagcttacatgaatcttgctcttgcaggttgatgatgtgttagagtcaaagttggagaggagatttgaacttgtgatggatgaaggaactctggacacgattgggttgcaccccgatggacctgtaaagaggtaatgcgtgcgaagctgttgatgtatgctttaatccctcatggtaaattatcataaattttgatacaccgcataatatttaggagtgacttggtactctcaattgcttaggttgtttaaactggcatggatcacactgcttgttggtttccatgtgttaaactattttcaatttactccatttcagaatgatgtattggcagtcggttgcagggctggtttctcctggtggcatactggtcagtacttccaccacattcaacccaaatatctttgtgttgcatggtggctcacttgcaacaaaattcgaacagtttactgtggtgaaactatttgctttacatattctacctacggaaattaccaatttaatatctacatatgatgttctgtttaacttttaataatcctgtgtaatctacatggtttcaccattacagtaactatttgaaagccatgtatgtgaagatggcttaggacaaagaatgtgtcaagcctctgatgctactttcacatgtgtttaggtcatcacatcatgtagcagaaccaaggatgagttggtccaggaggtagagagcttcaaccagagaaagctcagtgctatgggctccgaaggtgcgcaggccagtgatactgcggtgttcaagtacatcgaccatgtccaaacgtaccccatcgtggatagttcctgcatcacgaccgttgctttctcgcatagctgaaacatatatgtatgctctctctttttctccctaactttgccatcccagtgtgtatcccctttaccctagttctcttcgggtgatagtctactttgccagataggttattcagttgtaacgttgctttgttatgtcttgaattcttgatggatgtactcttttgaaagcgtgacaagcaacactattaca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0121100, RefSeq:Os01g0121100