Os06g0607700

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0607700| Description = ABC transporter related domain containing protein| Version = NM_001064568.1 GI:115468867 GeneID:4341486| Length = 61...")
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Gene Name

Os06g0607700

Description

ABC transporter related domain containing protein

Version

NM_001064568.1 GI:115468867 GeneID:4341486

Length

6186 bp

Definition

Oryza sativa Japonica Group Os06g0607700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25052748..25058933

Sequence Coding Region

25052790..25052948,25053629..25053912,25054999..25055154,25055973..25056459,25056519..25056836
,25057428..25057820,25058407..25058676

Expression

GEO Profiles:Os06g0607700

Genome Context

<gbrowseImage1> name=NC_008399:25052748..25058933 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25052748..25058933 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggagatcagcagcaatgaggagatgatggagatggccattgttgagcagctgcctccttcctctcatcatctcaatggtggcagtgttgaggttgacatggaggaggatcatgtgtggccaaccaaagatggccctctccctatattccttaagtttgagaatgtggagtacaaggtgaagctgactccaaagaacccactaacagctgcaagggtggcatttgcatctcacaagagcactgaggatcagggcagctgcaagcacatcctcaaggggataggaggcagtgttgaccctggtgagatcctggcactgatgggcccatctggcagtggcaagaccacgctgctcaagatacttggaggcaggctcagtggtggtgtcaagggccagatcacctacaatgacaccccctacagtccctgcctcaaaagaaggattggatttgtgacacaggacgacgtccttttccctcagttgacagtggaggagacccttgtgttcgctgccttcttgagactccccgctcgcatgtcaaagcagcagaagcgcgacagagttgacgccatcataactgagctaaatctagagaggtgccggcacaccaagatcggcggcgcgttcgtgcgcggcgtgtcgggcggcgagaggaagcggacgagcatcgggtacgagatcctcgtcgacccgtcgctgctgctcctcgacgagcccacctcgggcctcgactccacgtcggcggcgaagctcctcgtcgtgctccgccgcctcgccaggtcggcggcccgccggacggtgatcaccaccatccaccagccctccagccggatgttccacatgttcgacaagctgctgctcgtcgccgagggccacgccatctaccacggcggcgcccgcggctgcatgcgccacttcgccgccctcggcttctcccccggcatcgccatgaaccccgccgagttcctcctcgacctcgccaccggcaacctcgacggcatctcctcccccgcctccctcctcctcccctccgccgccgccgcctcgccggactcccccgagttcaggtcccacgtcatcaagtacttgcaggcgaggcacagggcggccggcgaggaggaggcggcggccgcggcggcgagggagggcggcggcggaggtggcgcggggagggatgaggcggcgaagcagctgagaatggcggtgaggatgaggaaggataggcggggcggcatcggctggctggagcagttcaccgtgctgtcgcggcgcacgttccgggagcgcgccgccgactacctcgacaagatgcgcctcgcccagtccgtcggcgtcgccctcctcctcggcctcctctggtggaagtcccagacctccaacgaggcccagctccgtgaccaagtggggttgatattctacatctgcatattctggacgtcgtcgtcgctgttcgggtcggtgtacgtgttcccgttcgagaagctgtacctggtgaaggagaggaaggcggacatgtacaggctgagcgcctactacgcgagcagcacggtgtgcgacgcggtgccgcacgtcgtgtacccggtgctcttcacggccatcctctacttcatggccgacctgcgccgcaccgtgccctgcttctgcctcaccctcctcgccaccctcctcatcgtcctcaccagccagggcaccggcgagctgctcggcgccgccatcctcagcgtcaagcgcgccggcgtcatggcctcgctcgtcctcatgctcttcctcctcaccggcggctactacgtccagcatataccgaagttcataaggtggctcaagtacgtgtcgttcatgcactacgggttcaacctgctgctgaaggcgcagtaccacggccacctgacctacaactgcggcagccgcggcggctgccagcggctgcagtcctcgccgtcgttcggcaccgtcgacctcgacggcggcatgcgcgaggtctggatcctcctcgccatggccgtcgcctaccgcctcctcgcctacctctgcctccgcaagcggatcagcctcatgcccttgtag</cdnaseq>

Protein Sequence

<aaseq>MMEISSNEEMMEMAIVEQLPPSSHHLNGGSVEVDMEEDHVWPTK DGPLPIFLKFENVEYKVKLTPKNPLTAARVAFASHKSTEDQGSCKHILKGIGGSVDPG EILALMGPSGSGKTTLLKILGGRLSGGVKGQITYNDTPYSPCLKRRIGFVTQDDVLFP QLTVEETLVFAAFLRLPARMSKQQKRDRVDAIITELNLERCRHTKIGGAFVRGVSGGE RKRTSIGYEILVDPSLLLLDEPTSGLDSTSAAKLLVVLRRLARSAARRTVITTIHQPS SRMFHMFDKLLLVAEGHAIYHGGARGCMRHFAALGFSPGIAMNPAEFLLDLATGNLDG ISSPASLLLPSAAAASPDSPEFRSHVIKYLQARHRAAGEEEAAAAAAREGGGGGGAGR DEAAKQLRMAVRMRKDRRGGIGWLEQFTVLSRRTFRERAADYLDKMRLAQSVGVALLL GLLWWKSQTSNEAQLRDQVGLIFYICIFWTSSSLFGSVYVFPFEKLYLVKERKADMYR LSAYYASSTVCDAVPHVVYPVLFTAILYFMADLRRTVPCFCLTLLATLLIVLTSQGTG ELLGAAILSVKRAGVMASLVLMLFLLTGGYYVQHIPKFIRWLKYVSFMHYGFNLLLKA QYHGHLTYNCGSRGGCQRLQSSPSFGTVDLDGGMREVWILLAMAVAYRLLAYLCLRKR ISLMPL</aaseq>

Gene Sequence

<dnaseqindica>43..201#882..1165#2252..2407#3226..3712#3772..4089#4681..5073#5660..5929#ctctgaacctgtcactctttttttctgtgtctcttggaggagatgatggagatcagcagcaatgaggagatgatggagatggccattgttgagcagctgcctccttcctctcatcatctcaatggtggcagtgttgaggttgacatggaggaggatcatgtgtggccaaccaaagatggccctctccctatattccttaaggtgtgtatatctatctcttcttccatttttcggtatgcgcgaaaacagatcaagtttatccttgttgatgttcaagaaagtgttttaatccctcgtttatggttatgaaaaattatgaaaacaataaatagattatccctataagcttttataggtaagtggatacatatgtgcatgtttgtaggtatgtgaaaagattaatcagaatgcttacacatgttgatgttctccctatgtagtgtgtgtatatatgtgcatgtttgatgtttgtagcaactgaacaatttagttctactaagcagagtttgaaaaagatcgatattactaccaggatttattaagatactaaaggttttaccgtgattaatcatgaaatcatgaaaaaaagtttgtattaattatttcttatgcattttatagagtctaattttgaactcagagatgcaaaaaatgccaaacaaaggaaacgacctgaaatagacatacttaaggagggaaggtacaagttagttggttggcaatttgcatgtctcattgctcaacagtttcttatctaattgcaaaaacttcttgcatggtgtttttacttctttggcatgcaatatagctaacaaaaaaggagcaaattcctggtctaaatttttgcttgatatataaatatttttttttggaaagtgcagtttgagaatgtggagtacaaggtgaagctgactccaaagaacccactaacagctgcaagggtggcatttgcatctcacaagagcactgaggatcagggcagctgcaagcacatcctcaaggggataggaggcagtgttgaccctggtgagatcctggcactgatgggcccatctggcagtggcaagaccacgctgctcaagatacttggaggcaggctcagtggtggtgtcaagggccagatcacctacaatgacaccccctacagtccctgcctcaaaagaaggtattccctctatttcatattataagtcgttttgactttttcttatttaaacattattaagtttaactaagtttataaaaatagcaatgttttaaacaccaaattagtttcattaaatttagcatcgaatatattttgataatatgtttgtttaattcttttgtgttaaaaatattactatatttttctataaacttacttaaacgtaaagaaatttaactagaaaaaaaagttaaaatgacttataatatgaaatagagagagtaactgtataaagtcatagtggatattaattagtatgatttatgtaatgagaaaggtccggggtcttccgactagcacgataaggtgtgggttagttgatcaagttcaagcctcatctctcttaataaattttgatataaaagttatttctctcatatctagtgtttttttttatttatggtagttattgtaagaccataaggtatgggttaggccctgtttagtttccaaaaacttttcgaaaaaacatcacatcgaatctttagacacatgtatggatcattaaatatagataaaaataaaaactaattacacagtttgtatgtaaatcgcgagacgaatcttttgagcctaattagcccatgattagccataagtgttacagtaactcacatgtactaatgccggcttaattaggctcaaaacattcgtctcgcggtttggcgagttatgaaattagttttttcattcgtgtccgaaaaccccttccgacatccggtcaaacgtccgatgtgacacccaaaaattttcatttcaccaactaaataggcccttagttattgtaagatagaatttttgcatagttatgctatctttcgtaaactagtggagtagattgagtaaaaccagtatgtcttcaaagagaatttacaggcacgcaaatgactgacaaactgcttagtgtttactgcaatcttcagataagagagaacatgtattggcatgccaaattaagcagtgtagttgcattgttctgcaggtatcaattaaagtggaaaaattaagtaatcaagactaattattttcttttgatgaaaacaggattggatttgtgacacaggacgacgtccttttccctcagttgacagtggaggagacccttgtgttcgctgccttcttgagactccccgctcgcatgtcaaagcagcagaagcgcgacagagttgacgccatcataactgagctaaatctagagaggtctgtaagtatattttcatcaaaggaaaaaaaaaactacaccgattttactaatataagttgtcaaaccaacaatctgcagcttaacacaaacccacgtgaagcaaaatagcatacaaaataaaatcatgactaatagcataaatctgttttttttctgaaattcgaataagaaaatgcaaagaaacgcaaatatcgcatcttaaagtacagtggtgcattagaattactcttgatttttctcgaccaacctacatgacatacctactgaacgtgcactttcatttcaaaagagaaattttacagttcttaaagagttattatattttgtagtgcaaatcaaaatttacattagaaaaaaaatgatatcttttaacggtcacaaaattactcatcttaaaaatggtgggtcatacggcaatggtatacccattgaacagtgtttacgatttcggaaaattttggaccctggcacaaaactacttcactgaattatttttcccttttttttcatgaatttgatcgaaaatttgttcaaaacctaataaatagtttttaaatatccaatatctcggaaaatttcgctacccaggacccacgacacaaatgctgaaaacgaaaaggactacctattaaacttttggtacatttataactttgaatcttacataattttcaactaatagatatatagcccgttttaaatgaaatagaaaaaaaagagacaaacatgtcaaaaaaaaaaccgtaaatctaacttaaaataaaatgttgtgaaaaaaattctaatgtttgtacacgattgcaaaactctgcaggtgccggcacaccaagatcggcggcgcgttcgtgcgcggcgtgtcgggcggcgagaggaagcggacgagcatcgggtacgagatcctcgtcgacccgtcgctgctgctcctcgacgagcccacctcgggcctcgactccacgtcggcggcgaagctcctcgtcgtgctccgccgcctcgccaggtcggcggcccgccggacggtgatcaccaccatccaccagccctccagccggatgttccacatgttcgacaagctgctgctcgtcgccgagggccacgccatctaccacggcggcgcccgcggctgcatgcgccacttcgccgccctcggcttctcccccggcatcgccatgaaccccgccgagttcctcctcgacctcgccaccggcaacctcgacggcatctcctcccccgcctccctcctcctcccctccgccgccgccgcctcgccggactcccccgagttcaggtcccacgtcatcaaggtatgtgcgtgtctcgtgtcgagggcccaagaatcactctcatggcgttgtgggtgcagtacttgcaggcgaggcacagggcggccggcgaggaggaggcggcggccgcggcggcgagggagggcggcggcggaggtggcgcggggagggatgaggcggcgaagcagctgagaatggcggtgaggatgaggaaggataggcggggcggcatcggctggctggagcagttcaccgtgctgtcgcggcgcacgttccgggagcgcgccgccgactacctcgacaagatgcgcctcgcccagtccgtcggcgtcgccctcctcctcggcctcctctggtggaagtcccagacctccaacgaggcccagctccgtgaccaagtatgtacactagcttcttcttcctcctctcgacaccgccattgctgacgtcatcaagaactcaaactgtccgatcaagaacacatacacaaacccaccctctccttcttcctcctcctctcgacaccgccattgctgacgccattgtcaagaacatacattcctcttcttcctcctcctctcgacaccgccattgctgacgtcatcaagaactcaaactgtccggtcaagaacacacaccctcttcttcttcctcctctcgatatcgccattttcaagaacatacactcctcttcttctttctcctcctttcgacaccgccattgctgacgtcatcaagaactcaaactgttcgatcaagaacatacacataaactcctcttcttcctcctcctctcgccaccaccattgctgacgtcatcaataactcaaaacacacacctcttcttcctcctcctcctctcgacaccaccattctcaagagtcaagaacatacactcctcatcttcttcctcctcctcctccttgcacagttgcaccgccatcggcaagaagtcgaggtgatcaagagtaatatgtgtgcgtttgcaggtggggttgatattctacatctgcatattctggacgtcgtcgtcgctgttcgggtcggtgtacgtgttcccgttcgagaagctgtacctggtgaaggagaggaaggcggacatgtacaggctgagcgcctactacgcgagcagcacggtgtgcgacgcggtgccgcacgtcgtgtacccggtgctcttcacggccatcctctacttcatggccgacctgcgccgcaccgtgccctgcttctgcctcaccctcctcgccaccctcctcatcgtcctcaccagccagggcaccggcgagctgctcggcgccgccatcctcagcgtcaagcgcgccggcgtcatggcctcgctcgtcctcatgctcttcctcctcaccggcggctactacgtccaggtgaatctcacaaatatcatcttctgatttctgaattttggttctcgatcactttcccgtgttctaaaacatggtttaaatgttgaagaaatcaaaagtattttggaaggacggatagaagtgaaattttggactagaaagcacaaaattatcttcttctagtttctgaattttgcttatcacaaacatggttataatattgagtaaattagaaacatttcttcttttagaaaaaaaaacaaaaagtatttcagaaacagagtttgaacaagcaatttgtttggctgaatttaaacatgttctactcaaatttaaaaaaaactatttttttcggttaaaataatatctgggaggccatatacccaaaatttctaaaattcctttccgaaaatttcaaaaataaatttgctccgaaatgtgaacgaacagggccaaaaaaaacacacaaaatattacatatcattgtgcatgcatcgactatttatcgacattatattcctaacttttttcacaccaaataagctcggataaaaatgaaattgaaatttgggataattttgtttggattgaacaaaaaacattgcagcatataccgaagttcataaggtggctcaagtacgtgtcgttcatgcactacgggttcaacctgctgctgaaggcgcagtaccacggccacctgacctacaactgcggcagccgcggcggctgccagcggctgcagtcctcgccgtcgttcggcaccgtcgacctcgacggcggcatgcgcgaggtctggatcctcctcgccatggccgtcgcctaccgcctcctcgcctacctctgcctccgcaagcggatcagcctcatgcccttgtagtccatcgatctgtcagatcaggatcagttggttcggggaagaagacgactgatgtggtagtgaattgcaattgcgattgatgatggtgaatgggccattgttggtttgggtgctgtgaattgtttcaaacttgagttcttttctttatttgagaagtatttgaggcttgtctgcttagcaagttgggaaataatcaaccccatcattttagcattcagcttgtaagcataagcgaagatttatttaaaacttatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0607700, RefSeq:Os06g0607700