Os06g0609500

From RiceWiki
Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0609500| Description = Homeodomain-like containing protein| Version = NM_001064580.1 GI:115468891 GeneID:4341499| Length = 4434 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0609500

Description

Homeodomain-like containing protein

Version

NM_001064580.1 GI:115468891 GeneID:4341499

Length

4434 bp

Definition

Oryza sativa Japonica Group Os06g0609500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25145912..25150345

Sequence Coding Region

25147236..25147449,25147590..25147666,25147758..25147800,25147886..25147943,25149026..25149093
,25149544..25150073

Expression

GEO Profiles:Os06g0609500

Genome Context

<gbrowseImage1> name=NC_008399:25145912..25150345 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25145912..25150345 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatgaaccaaagcccttctcaagcattgtactagctcacaacgatccagtttcccacaatcaacaaattgaacgtattaacaacaatgtagtatctaatagtggtgggaacagctcaaacagcaactttgccgccagacagcgcttacggtggactgatgacctccatgatcgttttgtggatgctgtaacacagcttggtggacccgacagggcaactccgaagggaattcttagaataatgggtgttcaagggttgaccatctatcatgtcaaaagccatctgcaaaaatatcggcttgctaaatacattccagatcccacagctgatggtgccaagtctgacaagaaagatctcggagatttgcttgctgacattgaaagctcctcgggaatggaaataggggaggctttaaagttgcagatggaggtgcaaaagcggctacatgaacaattagaggtgcaaaggcagctacagctccggatagaagcccaaggaaggtacctccagaagatcattgaggagcagcagcggctcagtggtgtgctgggtgaatcaggcaagttaggcgccctgggaccagctccaggggagccataccaggattccaacaaaaccgacccctcgaccccggtaccgacttccgaatccccaatccgcgacaaggctggaagcggcttgttcaagaccatttcttcgcacgacgactgccgcgagcctttgacaccggactccagctgccgtgccggctcccctttggagagcccccccagggctagcaagaggatccgggtcagcagcgacattgatcatcgtgggaacaatgagttcccccctcctctcaaagttccggagccaagttcaggttcagatttccgacaggaaagctcagtgttattatcatccagcgcagtgcacttcgattctttggagagcctggatgcagatgaaaatgtcttcaccaatggttcaggcagtgatgattga</cdnaseq>

Protein Sequence

<aaseq>MYEPKPFSSIVLAHNDPVSHNQQIERINNNVVSNSGGNSSNSNF AARQRLRWTDDLHDRFVDAVTQLGGPDRATPKGILRIMGVQGLTIYHVKSHLQKYRLA KYIPDPTADGAKSDKKDLGDLLADIESSSGMEIGEALKLQMEVQKRLHEQLEVQRQLQ LRIEAQGRYLQKIIEEQQRLSGVLGESGKLGALGPAPGEPYQDSNKTDPSTPVPTSES PIRDKAGSGLFKTISSHDDCREPLTPDSSCRAGSPLESPPRASKRIRVSSDIDHRGNN EFPPPLKVPEPSSGSDFRQESSVLLSSSAVHFDSLESLDADENVFTNGSGSDD</aaseq>

Gene Sequence

<dnaseqindica>1325..1538#1679..1755#1847..1889#1975..2032#3115..3182#3633..4162#aggaaggaaagaaacctaagcccatcggaaatctctcctcctcccagcaaagaggaggtggtggagatctcccaatccgcgggaatcactcgctgttcaccccgattcggcctccgctcgagctctgaatctcgggagctcctgatctgggtgcgtggtcctgtccattgctgctgggttcttggcgaatttagttggggattcgttggttcttggggtcagtttaggttctccgggttatagactttgcttgcgaattgcttcgggtgaaactgcttgctggattttgtaggggaaatcctttgttattgctgcagaagagagcgccatttggggaaatgctcgttacatttatgtttacttcggcgatttttgagaggctcgaggaaagctagatgtgagtgtgcaaatagggttgagtttctcatatatcgtgttgattgtattgtgtgataagtaggttttggcagctgttcattttttccaggatagattcgactccaactccgcatctgcttaatcattcttaggaaaaatgtaatgctgtttctttgatttggagtgtgtatggttatccctagttttgttagagaacttatattgcccttgttaatactctgctagtttgtgtgcttgggacgtccttattccccacaaattctgctgtcaattgatggaggcatttgatgtagtataaatctctgactagtgcaaagaagcattgctttgaagtggcaaaggtattactgtggactgttattgaatcccataaacttaagtggcaacataattgttgaagctttggttctaacaaccacaaggataagtgttaggaacatactagcatatggtgtcttgttgcacaactctcctgcgcgttcgagaaaaaaaaaattatggtccttatgtaaagagacaaaatgcagatatcctgtttggtagaagtttggcaccattccatacaacagctgccacaattatttcaccaatatgactttatctcaacctgcaggcatacattcattttatattttagtctgccattgccagtgcagaactatcttgtgtgtgcattatatgctggagaaaggcttcaccagtagtaaaagttcattacacttaccattcaagcacagacatggcacatgctaaggaaatcgaaaacattagttcctattttcacttcatatggctccttataccacttttttgtgctatggtggaatattgttttaatgttttgtgaagatgagtatttgatcttcttaccttatttcacagcatggtaattcagtttatatatgtcttgtgcagaggatgccaaatgtatgaaccaaagcccttctcaagcattgtactagctcacaacgatccagtttcccacaatcaacaaattgaacgtattaacaacaatgtagtatctaatagtggtgggaacagctcaaacagcaactttgccgccagacagcgcttacggtggactgatgacctccatgatcgttttgtggatgctgtaacacagcttggtggacccgacagtaagttactatgcctgcttaattacttttctcctagtacaaaaaatcctgtgcttgctctccattaagttttttgttcacaaaccctgtgatgctaaatacatttatgctaacggactatctttcaattcttatttcaggggcaactccgaagggaattcttagaataatgggtgttcaagggttgaccatctatcatgtcaaaagccatctgcaagtaattgagcttgagattctcaatacctgcatatagtctattctccagcttatgttctagactttactgattgaattgcttgtttcttcagaaatatcggcttgctaaatacattccagatcccacagctgatggtacgtaattgctgttgtggaacataagagtttgatatagatgttacaattttcaagttaagaaataaggatttaatttgtgtaggtgccaagtctgacaagaaagatctcggagatttgcttgctgacattgaaagctcctcgtaagttatttctccttccttcaaaaaaaaatgcatgttggtatgtatctggagcctatgtgctcttctagtagttgtgaacttccactatcttttccattcacttagctgtttgtgtccatgggatttgatgggttcctcttaagaaaaataaaaaaaatctaattctattgccatattctactagcacaacagtctggtacaatttgacgtggagccgctccacacatacctatatggtcatcctctgtcgcataaacttttacttctccaacactgaatttaagtattcattcacaaactattattattctaattgtgagtttagatctcccagcaccacataggtatgtccagtaatggtgagaaagcatagctattacctccatgaggaattagccccatgacacgtgaccatgaggacttcctggttcatcttccgttcgcattcatcaccctaaataaattctaaggttgcctcattttgtacttcatagcattgcatgtacatgccaaccaattattattttcttttttctaatgataaacctgttgtttatgctgataaactgttctgaattttccttcttctgatcattgtggttaagcaatacaaatggaaagcgtctagctccataggtctgtagcaatataggttatccatttagggcatagagcattgaaaatatttctgttgtgcagaattttcagatagcaatgcacactatgtgcatgagaacttctaaagttgaaactaactgcatcacgttgcttgtttacatgcatatcacaaataaattgaacagctgaaatgatatgctgctgcattaaagaaacataaatacaatatgcactttttctgtttttcgttatcttgtttccaggcatccattcaatattgttcaacaaatctgtacttattgatgtagtattcgaagtagaaagttcaattttgcattgtctagtttaaatgcatccatcagatactacttagcaattctttactcccagaaatcttgtttaaggatcgagtagccaaagtaggatgttgagttcttaacaaagcatacttatatatgaaggggaatggaaataggggaggctttaaagttgcagatggaggtgcaaaagcggctacatgaacaattagaggcaagttgcctttcgggcaccttctttatgtctgacttcatgtttgtacttcatctcaattctgcatttctgctaatgctgtcaaataacacgtgtcctttaacattgtgttgttttctctattggatcggatagtctagttttattaaattgcttacagacacgctgcttctaacctcgtacatggatattgttaaaaaattatataagctctttcctgtaactaaaaacaattctatacagtgacatcttctgtttatgtttgacttctcaactgtactgcttcaaaataatgtaactagatttgtttcatctatgcattatttcagtcatcaggtgttttcactgatagtgccaaacaagatttgataacgcagaacatgtctacaggtgctactctttccaattccagagaatgtaacttactgctctttcaaaacatgtctacaggtgcaaaggcagctacagctccggatagaagcccaaggaaggtacctccagaagatcattgaggagcagcagcggctcagtggtgtgctgggtgaatcaggcaagttaggcgccctgggaccagctccaggggagccataccaggattccaacaaaaccgacccctcgaccccggtaccgacttccgaatccccaatccgcgacaaggctggaagcggcttgttcaagaccatttcttcgcacgacgactgccgcgagcctttgacaccggactccagctgccgtgccggctcccctttggagagcccccccagggctagcaagaggatccgggtcagcagcgacattgatcatcgtgggaacaatgagttcccccctcctctcaaagttccggagccaagttcaggttcagatttccgacaggaaagctcagtgttattatcatccagcgcagtgcacttcgattctttggagagcctggatgcagatgaaaatgtcttcaccaatggttcaggcagtgatgattgatttttcatctgtgtaggggcagggcagtgatgtttagaggacttgctagttatctcttcagtagagctgttgatcttagtgaggctgtaatgctgtaaacccagccatgactgttagttgttatctactgttcagtgcatgtttgtagcttatacttattcaatcagagatgtgcagtgtgcacatcactttacagttcatgtaggtctggaaatgtagtaaggtgagaagaacataaagatatgatcttattttcgttgagcatgcaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0609500, RefSeq:Os06g0609500