Os01g0153500

From RiceWiki
Revision as of 18:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0153500

Description

Protein of unknown function DUF674 family protein

Version

NM_001048590.1 GI:115434593 GeneID:4324506

Length

877 bp

Definition

Oryza sativa Japonica Group Os01g0153500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2884425..2885301

Sequence Coding Region

2884425..2885069,2885215..2885301

Expression

GEO Profiles:Os01g0153500

Genome Context

<gbrowseImage1> name=NC_008394:2884425..2885301 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2884425..2885301 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcctccaccaccgcgctgagcatgaagctgctcgtcgacaccaatgcccagcgagtgctgttcgcggaggcgagcaaggatgtcgtcgacttcctcttctccctcctggcgctgccggtcggcacggccgtcaagctgctcgggaaggactccatggtcggctgcgtcggcaacctctacgccagcgtcgagaagctcgacggcacctacgtccagcccggcgcctccaagaacgcgctgctcagccccgtcgtgctctcgccggcggccagctccaacacctccgtcctccgcttgccggccccgtcttcttcgcagcccaagagcttcttcagctgccgctcctacgactgtttctactacgtgacggacgtgagcggcgtcaagtgtccgtcctgcggcaaccagatgacaacggcatgcacgtatgccgcaccaaccgctgcccagaagctgcaggccgctgcagccgaaggggcggggaaggggttcgtgcagggcatcgtgacgtacacggtgatggacgacctcaccgtgtcgcccatgtcgtccatctccagcatcacgctgctcaacacgttcgccgtcaaggacctgggcgcgctcaaggagcagaccgtgcagctcggctacactgagggcctggcgatcctgagggcctcgctgcagtccaagaccgttctcagcgacgttttccttgccaggaggcctgcaaagcaagcctga</cdnaseq>

Protein Sequence

<aaseq>MAASTTALSMKLLVDTNAQRVLFAEASKDVVDFLFSLLALPVGT AVKLLGKDSMVGCVGNLYASVEKLDGTYVQPGASKNALLSPVVLSPAASSNTSVLRLP APSSSQPKSFFSCRSYDCFYYVTDVSGVKCPSCGNQMTTACTYAAPTAAQKLQAAAAE GAGKGFVQGIVTYTVMDDLTVSPMSSISSITLLNTFAVKDLGALKEQTVQLGYTEGLA ILRASLQSKTVLSDVFLARRPAKQA</aaseq>

Gene Sequence

<dnaseqindica>1..645#791..877#atggcagcctccaccaccgcgctgagcatgaagctgctcgtcgacaccaatgcccagcgagtgctgttcgcggaggcgagcaaggatgtcgtcgacttcctcttctccctcctggcgctgccggtcggcacggccgtcaagctgctcgggaaggactccatggtcggctgcgtcggcaacctctacgccagcgtcgagaagctcgacggcacctacgtccagcccggcgcctccaagaacgcgctgctcagccccgtcgtgctctcgccggcggccagctccaacacctccgtcctccgcttgccggccccgtcttcttcgcagcccaagagcttcttcagctgccgctcctacgactgtttctactacgtgacggacgtgagcggcgtcaagtgtccgtcctgcggcaaccagatgacaacggcatgcacgtatgccgcaccaaccgctgcccagaagctgcaggccgctgcagccgaaggggcggggaaggggttcgtgcagggcatcgtgacgtacacggtgatggacgacctcaccgtgtcgcccatgtcgtccatctccagcatcacgctgctcaacacgttcgccgtcaaggacctgggcgcgctcaaggagcagaccgtgcagctcggctacactgaggtgataaactaaattatctactaatcatcattcatcagtcaacactcaccactcctcttctctttctctgttttatattagtgctttgcatgtacacgttgccatgtccgtgatgctgcatatatgttgtgtttgtgttttgtagggcctggcgatcctgagggcctcgctgcagtccaagaccgttctcagcgacgttttccttgccaggaggcctgcaaagcaagcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0153500, RefSeq:Os01g0153500