Os01g0164700

From RiceWiki
Revision as of 18:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0164700

Description

Protein of unknown function DUF410 family protein

Version

NM_001185264.1 GI:297719662 GeneID:4324415

Length

6971 bp

Definition

Oryza sativa Japonica Group Os01g0164700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3335250..3342220

Sequence Coding Region

3335408..3335479,3336310..3336389,3336911..3337151

Expression

GEO Profiles:Os01g0164700

Genome Context

<gbrowseImage1> name=NC_008394:3335250..3342220 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3335250..3342220 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcggtccctgagcatgaggtcgtcgatgagcatgaggtcgcgccgcgacctgcctcctccccagcagacaatcgaaaagcttgagaatatggtggctgaaggaaattattatgaagcccaacaaatgtacaagtcaaccggtgcaaggtatattgctgctcagaagtatttggaagccttggacatccttcagtcaggagctttagttcaactgaagcatgggcaggttctatcaaagctaaatttcatagatctaagtaaaaaaaaaatattcgctacatttgatggcaaagtaacacccctcccaaaagaaaagagaagagagagccaaccaaaagctcattgctcccttcgtaacgatttgttgcaaccagccaatggaccttga</cdnaseq>

Protein Sequence

<aaseq>MSRSLSMRSSMSMRSRRDLPPPQQTIEKLENMVAEGNYYEAQQM YKSTGARYIAAQKYLEALDILQSGALVQLKHGQVLSKLNFIDLSKKKIFATFDGKVTP LPKEKRRESQPKAHCSLRNDLLQPANGP</aaseq>

Gene Sequence

<dnaseqindica>159..230#1061..1140#1662..1902#acccagccacccacccgcgccccaaatcacgaggaggcgaagccgcccatctcatcgccggagctcgcgaattcgccgccgcgattccgaccaccgccgcgccggcgcccgcgcccgctacggtactccgccgccgtgctgagatcgccgggggagccatgtcgcggtccctgagcatgaggtcgtcgatgagcatgaggtcgcgccgcgacctgcctcctccccagcaggtgagggatccctcctctccccgtgccttgggtattgcgagtgtaacatttgcgcgaggtgcgcgggattcgctgttgcgtgcgcgatgcgctagtttgatctcggtgtttttcgaccttggggcgtagaggggcgagggggtcgattacccgactcttcgtggcgaatttgaggaaactagggttctagtaccgaatcatgtccaattgcgaatctcgccattttattgtgtggaactactagctggaaaaatcaatcgtaatatttctaagaaaaattaagattacttattgtggtttgatgatgataaaaaaaggcatcaatgatttactctccgcagtccgcaccacctggttgtgcgcataatcactagggccttgtccggttacgcccggattcaatccgggccgggaatgacaagtacagtaagaaatttatgatagatacaatgagagaccgggaattattccgggccgggagccaatttactcatgatagagacaataagagaccgggaatcaatccactagtcaagaggtgtggaactaatccggatgttttgttgtccctatcatgagtaaattagttcccggcccgaaaaaatcccggtctctcattgtatctatcataaatttcttactatacttgtcattcctggcccggattgaatccagacgtaaccgaacaaggcctagctgtgggtatacctggtttggatcctctttgaagtgttcccagtcccagcatggttcctcatacccatctttgacaacattgagtatatttccctttggattgatgtttgtaaccgtgaggtgtttgttttcagacaatcgaaaagcttgagaatatggtggctgaaggaaattattatgaagcccaacaaatgtacaagtcaaccggtgcaaggtactctgtgaataatttaactgaagccacaatgattgattcccctttaacttgcatttgaccatcttgcttatggttgtctatttcagaactgcttagcatatgatagaaatcaaccattcactttttataacttaaattggatctgctaaataatatgagttgattgaatttagaatctttgttatacaatcttccgtctattatcatagttatttggctaatgcagcatcttaaaaatagttaatgtcaggattgttaggacattaaacaaattcaaagtaaaacaatgaccagaatgtttacatttgcatagaagcagtattactggatcctacaagtatgtttcatatgatcacaatgaaaaatgttattcatgcacaaaatggctattttctttgactagatttattgatttcttaataaaggaaaggggcatgagctttgtctgaaagatattgtagacaaaaagtgccaattcaggaatacaattttgattaattgtgtctcatatcttgcaggtatattgctgctcagaagtatttggaagccttggacatccttcagtcaggagctttagttcaactgaagcatgggcaggttctatcaaagctaaatttcatagatctaagtaaaaaaaaaatattcgctacatttgatggcaaagtaacacccctcccaaaagaaaagagaagagagagccaaccaaaagctcattgctcccttcgtaacgatttgttgcaaccagccaatggaccttgacgtgttcatttgaagttgtttttttaatgtgtgtattgtcgatgtggtggtagtgattcacatcttattatgggatgtttttattgggtgctatgctgtagttacatacatgtgttatcctagattggtgttttatatcattttaaaccttcacatttttgccttattggttaaaaattcctgatttcaggtaacttgtggtggtgaacttgctataatgtttgtggacacccttgtcaaggcagcgcttccttataatgaagaaacctttggtcagtcttctctcatagtgaaaagctactatttctttatatcattaacatgctaataaattgcatatttatcctgtaagtaaatacacatctagatttcatttttggaacatatttacaatattttatttgtagcatactcctaatgtccatcacttgtaaagttttgtagaatcaaagttgtttaaaatgttagtggaagcagtgtttactagtcctaattgtggctctagctttactttgtcttctctttgtttgtttaccttcagaagatcacttttcccttagattttaattgaattgaataagatacttactttattatgaatgagaacatgtttctagtttgatttgttagtatcacattttgtgattgaaactatatgtaaaccttagatcgtatcagaaagatgtacgacgccttccccaggatatctgttccacacttccttggagatgattatgatgacgacgggcagaaattatccgaagctatttctgcagcaaaagtgcgttctgagagttgttcatcattcctgagagctgctatcaggtaaggttgtactaattttcattaatccaagtaaattgagtagaaaaactaaatatccttcatgcaagcatcaaacatcttcatctaaacatggcagtttgtttaagtggatcttaaggcaaatacatcaaactgttgaatagcatctatactatgaccaggacttgttaactgtagtgcttgaccagtagttcattactgacaaaagtagaacagacaattgagcttatcatgatggtaaaaacaaatgatctgttctcgttgctcacttgcatataaaaatccagatgttgattgtgtaagtttgtttattacaataatgctctcagaaaaaaatgaaaaaggagatggtcacgaatttgtgattttaagatgaactcaaggtgtgcaacatataagaatcatttccatgggatctttgaatctttatgtttaactctgttaatggacaatgtggtcatctagttgactcttctcaattttctgcctgctatatttatatgccactaatagcatatcaatcctttattaaggtggtctgctgaggttggggcatcaagaagtggatctcctgagctgcatgttatgttggcggaatacatatattctgaatctccagaaacggtactgtttataaattatagaactatttttctgacatgaatatattgtgtttgttttagagctgaaattttatgtcttttcaactgttactctttaatgcctttgtggtttgctaaggttcgtgttgactgccgttggatgcaggacatgactaaagtgtcaagtcattttgtgaggggaaatgatcctaaaaagtttgcctctatgctggcgaactttatgggaaaggtaatggtttttagaaaataattgataatagacttgcagctgatgattgtctaatgccaaattctattgaactgttacattcttctgttctctgagcaatgattaaaatgtcttatctgaatatgatcagtaggttcacattctttacaacaattttcattttacaacgggtctcttgcttatagtttttatttgagttggaggtcatccttctccgaaaatagaaacacggtgccagcaagtgattgttcaatcagttatctatatccatttttgggttggattatttcaagaccaacataatcttcgtgtaaagcagtattcatagatgttttttctcaatcaaaaaaatatttttattaatatttttcttactgcacagtgctaccctggtgaagatgatactgcaatagcacgtggtgtcctaatgtaagatataatttctttcttttttttttcctttcaaagagtgcattgttttgacactggcaaaatttctaaaagccatggaagatgtttgcatcttgcaatgcagaaaccgaatttcatagggagttctctatttcatgttctgtttacaatgagtaaacaatatacatatttaggaatgtgctagcaaatcatgcattaggatatatttcctcaatatgcatcaatacaatatcctgctaagttatatacaaatctcctttggatacttaagcacatacaggagcacactataaagtgctccatccaaggtaaaatattagaatttgatcgaacttcggaaatagttacataatatattattttattatgtttatagtactatagtatgttaaaaggaagtgtcaaaattcttgcactggggaccagaaaaatcaaagctaacttcagaaaaatcaaagttaagaaagtgtttcgttataggatgaataaataagaaatttttggggaaaaagacgtgctcagatgcttgtttttctgatatactgcatttttatttaaggtatctatcacaagggaatcttagggatgcaaatttgctcatggacgagctgaaggatcaactaaaatctgctgacttggaaatccccaaaacagatttaattcagttcatcaagtatctcttaccgacgtaagtctttcctgtctttcagtttgcattatttttatgtttcttttccacatttttgttctgcaatgttctcatgtatttgtgtgcattcatgctgcaatttgccatgataacttagaggacacctgcagagtagtttcatccttacatgtttctactaaaaaatactgatcgcaggaacaattcttttttttttgaaagaaccaccagttatgggaaaatctttcatggcctaggtacattacctgggtattagactattttccacctttgagatatgttcatagtttatgtaggatttgttttcagtacagatcatgaatgcatataaaaatattaaatatttctttgatggttattgaaaaattctgataaccttatataacttagccatgtttaagttctcactgatggttaaagttcaaactgttagatttggttgatgctttgctgttagattgcatgctatgcaggataatgattatatttgactgtattgatgatgtgataattttaacactgtaaatctaggatctattgtgtgcttgttgtgtatcactgcgcaatatgttgatctaggttgcctaggtagctttctgttcactgtaaacaaactgatcctacagtttcaattatccaagtttccatgcatctttcgaataattgatgagatagttttgcattttgttacttgtacgtgtataccaagcccagacgttattttatacaagcaacaagtttttttttctcattgtttcctctggtcgtggttatattactgactgcatgctatgtttacaggctcgaaagagatgcttaccctcttttcaggacactgcggcagaagtacaagacaagtacagatcacgaccctgtatttgaggaggtagctatttcatcaaatatagtgttagcttgctaaacagctgtaaaacatgcaccaaaacatcttattctttcaaagattaacttaacaagaactgggaaaaattatatttttcatgttccctgcatagttgtcataaaacaatgtgttcacaagagttatattagatcatgtaggaaactctacaatttaatccaccaacaaccttgttatcatgtgctgtccatagggaaatgtaaacagtgttgataaaggaccatctgcacttataatgtgcttaatatttaactctactagcagagtaatatgtggatagaacttccattacattaactagcagagtaacttgaagaaggtagttaatgctttctatcatatatgaaaaacaagctgaaacagagctcacgtgatattatggttgggtttcagttattagatgaaatagccgcaaaattttatggaatacggagccagagcgctttggaaggactttttggtgatatgttcagggtaagatttacatctttcatctatcattcattcatgccgattgctagtacattgcattgattacttttgaagttgagtacacaccagttgcttttcacaataactaccgtcgtatgcctttagttccatatcagtcatgccgaaattacgtttcatgaagtgcatatcatgtttagaggaaagaatatatatttctataatttgaaattgcagttgatctaagcattcaggaattgaagtgcaaattttatgtagcttatgaagtcacggatgtccacctgttacgtggtaaacaaacaagaaaaaaaatttgagttctttctttcagttataaatattgccatcttcattttgttttgttcaattcaccttttctgtacgttcatgtaatttcacgtatagtttcccaagtacaatgaagcaaacagataatcaatactaaaccattagtgtagccaatattattacaatgactagaagtcggcaacctagttccgatacaagccattattgatcttgttctttgtattctgcaggtataatgatgagaaaaggatttcgtcataaatattccagcacaaagctcccgacgcgcatttcgttcgctaatacaaattgctgctggaagatgaacacccggcccggcccgaaaagagcataagaaaaagttctgttgctgccttcctcagccttgattatcctgaggccatacatttagctccaaactgcatatgatgatatatgctccagttaccactgatctcttgtaaaaccattcaactgttttgctcgtatcatggtcgtgttctaatgatattactattctttaacattttttgtagttccagttttgcagttttaaaacggcatttatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0164700, RefSeq:Os01g0164700