Os09g0514100

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0514100| Description = FAD dependent oxidoreductase family protein| Version = NM_001070191.1 GI:115480124 GeneID:4347563| Length = 4768 bp|...")
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Gene Name

Os09g0514100

Description

FAD dependent oxidoreductase family protein

Version

NM_001070191.1 GI:115480124 GeneID:4347563

Length

4768 bp

Definition

Oryza sativa Japonica Group Os09g0514100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20665170..20669937

Sequence Coding Region

20665244..20665565,20665657..20665809,20666201..20666415,20666493..20666563,20666706..20666865
,20667306..20667498,20667644..20667799,20667937..20668025,20668310..20668403
,20669573..20669583

Expression

GEO Profiles:Os09g0514100

Genome Context

<gbrowseImage1> name=NC_008402:20665170..20669937 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20665170..20669937 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgccaccgccttcgcctccgctccgaaccctagccacgcgccctcctcctcctcctctctctccgcctcgtactcgcgggttctccgcttctccgtccgcgacccgtggcggcggcggcgggggcagcgcctcccgctccacgcgctccgatcgcagcgccccgagccggcgcccgcgtccgcgtcccaccacgacgtggtggttgttggcgccgggatcatcgggctctccatcgcgcgccacctcctcctccacaccccgctctccgtcgccgtcgcggacgccgccgtcccgtgcaccggcgccaccggcgcagggcagggatacctatggatgtcacaccggacgcccgggagtgacacgtgggagctggcggtgcggagcaagcagctgtgggaggagctcgccgccgaggtggatggcctcgggggcggcggtgcgcgggagaggctggggtggatgaggacaggaagcttactagttgggagaacttccgaagagatggctacattggaggaaaggaccaaagctctatctcaggcaggaatacgtgcggaatgcttgtctgctgcttcattgcatgcattggagccggaactctatgttggacatgatgggggtgctatgttcttgcctgaagactgccagattgatgccttccaggctgtctcattgattgaaaagaccaatggttcatattcctcagaaggaagatatatggagatctataatgatcctgccatgtcattagtaagatcagagactactggaacagttcaaggtgtccaaacatctaagcacatcctatatggcagaaaagctattgtaattgcttctggtgcctggactcgaaccttattgcgtagttttcttgaaccgaatcctacattggacattcctgtgatgccacgtaagggtcatttgcttgtgttggataaatttgacaagcttaaactaaatcatggactaatggagctaggatacgttggccatcaagttgctaaatcaagcggcacacccctatcttcagaatccagtgaagatgagcatggtgctttatccatatcaatgaccgcaacaatgaatacaaagggaaatttaatcctaggaagcagtcgagagtttaaaggattttcaagagaagttgacatgtccatccttaaatgtatatgggaccgtgcagcagagttctttcctacgctgaagaatgttcatcttgatattgatgaaaacactgaaatcaggatcgggcaccgtccctttatgcctgatgggaagccagttattggatctgttcctgatctgccaaatgttttgattgcgacaggacatgaaggaagtggacttgctttggcattaggcactgctgaaatggtcaccgacatgattcttgggaatcctggaaaagtggacttctcgccattctccataaaagacaggttttcagcttacgactga</cdnaseq>

Protein Sequence

<aaseq>MDATAFASAPNPSHAPSSSSSLSASYSRVLRFSVRDPWRRRRGQ RLPLHALRSQRPEPAPASASHHDVVVVGAGIIGLSIARHLLLHTPLSVAVADAAVPCT GATGAGQGYLWMSHRTPGSDTWELAVRSKQLWEELAAEVDGLGGGGARERLGWMRTGS LLVGRTSEEMATLEERTKALSQAGIRAECLSAASLHALEPELYVGHDGGAMFLPEDCQ IDAFQAVSLIEKTNGSYSSEGRYMEIYNDPAMSLVRSETTGTVQGVQTSKHILYGRKA IVIASGAWTRTLLRSFLEPNPTLDIPVMPRKGHLLVLDKFDKLKLNHGLMELGYVGHQ VAKSSGTPLSSESSEDEHGALSISMTATMNTKGNLILGSSREFKGFSREVDMSILKCI WDRAAEFFPTLKNVHLDIDENTEIRIGHRPFMPDGKPVIGSVPDLPNVLIATGHEGSG LALALGTAEMVTDMILGNPGKVDFSPFSIKDRFSAYD</aaseq>

Gene Sequence

<dnaseqindica>75..396#488..640#1032..1246#1324..1394#1537..1696#2137..2329#2475..2630#2768..2856#3141..3234#4404..4414#acctacctcctctcgactcttcgagctcatcactcatcacctcgtctcgccgccgctcaccacaccaccttccgatggatgccaccgccttcgcctccgctccgaaccctagccacgcgccctcctcctcctcctctctctccgcctcgtactcgcgggttctccgcttctccgtccgcgacccgtggcggcggcggcgggggcagcgcctcccgctccacgcgctccgatcgcagcgccccgagccggcgcccgcgtccgcgtcccaccacgacgtggtggttgttggcgccgggatcatcgggctctccatcgcgcgccacctcctcctccacaccccgctctccgtcgccgtcgcggacgccgccgtcccgtgcaccggcgccaccggcgcaggtaccctcagtgcgcgtgcatgtgcgtggggggagttgggtaatatggcctctagggttttgatgtcccgttggtgtgtgcgctcgcgcagggcagggatacctatggatgtcacaccggacgcccgggagtgacacgtgggagctggcggtgcggagcaagcagctgtgggaggagctcgccgccgaggtggatggcctcgggggcggcggtgcgcgggagaggctggggtggatgaggacaggtaaaatccatgtgatggtgaattgctgttttttcaaaatttgtttgggggatttgggaccgatggagtcgcgtcgtctaaattgcttgccagagtgattataactttgtaagtagtggtgatttcagttagagagtacaatggacattaatggcatcccctagactcttacggtccaacagatttaacgaccaaggtaattgaggtacttttgtactccaatactccaggactgtaatgttgatgcggtagttggaaactatgctcgttcaatgatgaaatggcttatcatatacattgcattatgtgtactgtgtttgatcaaattttagttctctatggcagtcagagtctgaatgaaatgtgaaattctgttatcatttttgttaaggaagcttactagttgggagaacttccgaagagatggctacattggaggaaaggaccaaagctctatctcaggcaggaatacgtgcggaatgcttgtctgctgcttcattgcatgcattggagccggaactctatgttggacatgatgggggtgctatgttcttgcctgaagactgccagattgatgccttccaggctgtctcattgattgaaaaggtttcttctgcagaatttcgatttcatatttgtgcaattagcagtggtctccaaccgttaacattttcattcaatagaccaatggttcatattcctcagaaggaagatatatggagatctataatgatcctgccatgtcattagtaaggtatcaaggcctcttcttttcagataacttatgttggttggtagatgattacttgtctatcaggctactgagatgggctttcagctatgccaaaccatctacctctatctgcattactgataattgtgttaatttaatgcagatcagagactactggaacagttcaaggtgtccaaacatctaagcacatcctatatggcagaaaagctattgtaattgcttctggtgcctggactcgaaccttattgcgtagttttcttgaaccgaatcctacattggacattcctgtgatgccacgtaaggtacatgatacatctgaaatttcttgaatttacctgtgatctgaaaaatatttggattgaaatgatcctaatgacatgctagctaaaactaaatcattacaaattgttcaccacatatcttcagttcttccctaatatagtactaacatgatggtcatttctctgtaatatttaggaattacattttttttcttcttgtacccaactcaatacctaacaacattagggtaaaagaaacttcctctgttgtttcttaaactttcaccgagtccttatactcaactttgacaattactctttcctaattgcatgtttgtagaaattattaacttaagaaatgatacttttttgggggtaaatccactcagatcattttcatgcaagtatggtccacatctgtttgaggatgggggttgtaatgctgtagtcttccatttcagggtcatttgcttgtgttggataaatttgacaagcttaaactaaatcatggactaatggagctaggatacgttggccatcaagttgctaaatcaagcggcacacccctatcttcagaatccagtgaagatgagcatggtgctttatccatatcaatgaccgcaacaatgaatacaaagggaaatttaatcctaggtaatttatgaactagcaaacttcatcctttgtaacacgttttgttcgtgtggatgaaccaaactccttttcatttaaccaacttaagatacaacacaaaatgacagatgcaaccatgcaagatcaccacatttctatgttacaggaagcagtcgagagtttaaaggattttcaagagaagttgacatgtccatccttaaatgtatatgggaccgtgcagcagagttctttcctacgctgaagaatgttcatcttgatattgatgaaaacactgaaatcaggatcgggcaccgtccctttagtaagcccttctcattttagaacaactcaggaagagaatgccacatagtctttcaaagatatttcattgcaatgttattagtagttttttgctcttttatgtagtaccattggaaataaatatctcatttgtttcagtgcctgatgggaagccagttattggatctgttcctgatctgccaaatgttttgattgcgacaggacatgaaggaagtggacttgctttggtaagggcaatgtataaatctgctccagttagtagctttgtctcttattatttatgtagttgagcaatcaagcataggacttcctcagtccttggttctcctgatgacagggctacaggagttgggacgaataggcccaatagaggcatgtgtcctgtgtcgtatacagaaatagtcgtgttgtgttcgcttgattttttttttaatttgtagagattggttctactgttatctcttttaagaaggtacagaagttgatgttcatgtggtaaattttacttcaggcattaggcactgctgaaatggtcaccgacatgattcttgggaatcctggaaaagtggacttctcgccattctccataaaagacaggttttcaggtaattctggtaaacattttgtgataaatttatctttatgaaaatccatttgttatgttttcataatcacaatttctcttatctgcaacattgtctcactgatttttttttcttgccttgtactccctccgtttcataatgtaagactttctagcattgcccatattcatatagatgttaatgaatatagacacatatatatgtctagattcattaaaatctatatgaatatgagtaatgctagaaagtcttacattgtgaaacggaggaagtatgagggaatattgatgaatatcactgttttttttttacggactggcaagacgaatatcactgtgaagtgaccattattgagaaattccactggagaatgactgttttaaaattgccatcgcaaacatctcttttcacaaaaatgtcagtttcgatgttgttgtagtggacaaaattgcccatatctagtttcccatccccattccaaggtcatccatggcctgattgcagagcctcctcccacagccttcctggatagccctccttccttatttaactgtatgaaataattcagcttagccttagcttccgaacatgattgttacactgattcatttcatcttaattttaaattttcaacttgaatttgttgtgaacttctcgtattaagtttttcatgcattttattccttactgtatgaattatgagccatgatggatggaaatcgccatgattcctattgggagttcatagtgtagttgaaacctgaaaaacacgtttttaataaattatatttggggtttctgtcagagttagcttctttttctttttaaatttggcaaagtagtaaaacatcaacatttggtaagtggattgcatgtcggcgcttcccttacatgtgcctatgctaagtcatgaatatatatcctagatatggaatgtcttgattccattacaagggacgatgctatagggctcgctgcttgatgaaccttgtcatctatgcaactgagatacaaaatctcctttcaccctgctgatgtcctctacccagtaatctggttttatattttaggctgtccactgatgctttgtttttagttgattgcttgatgcactcagtaagtaactgttgctcagatcctcctctgtttcatgaatttcctttgcacagcttacgactgagggagctgaaatttgcttttgagtatcgtcgggaagcatttctccagtctgatccagatatcatcattgattcaaactcctgatagctaatgcgaccatcctgttgaatatatgcacaacatgtcagttatactattgaagtattgatacatgtgtgtaaagtgtaaaccccaactggaaaaaaaaacatggataggaaaccatcaaattactgttgcttcctgggtttcttgtacacttggatgaggatccaagatattttgctaaaaaaaagaagagaagactaagtttagtagactatgcctagaattcagcaagttttgtgaaatgggaatttgttgctgatttgcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0514100, RefSeq:Os09g0514100