Os09g0514200

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0514200| Description = Similar to Calcium-dependent protein kinase| Version = NM_001070192.1 GI:115480126 GeneID:4347564| Length = 3804 bp|...")
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Gene Name

Os09g0514200

Description

Similar to Calcium-dependent protein kinase

Version

NM_001070192.1 GI:115480126 GeneID:4347564

Length

3804 bp

Definition

Oryza sativa Japonica Group Os09g0514200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20669230..20673033

Sequence Coding Region

20669552..20669683,20670290..20670517,20670816..20670983,20671069..20671184,20671392..20671544
,20671685..20671828,20671965..20672088,20672250..20672918

Expression

GEO Profiles:Os09g0514200

Genome Context

<gbrowseImage1> name=NC_008402:20669230..20673033 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20669230..20673033 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggctgctcctccgccttcgcggtttccaccaggatgatccgcttcagccgcggccgcgtgccggcggccatcctccccgtcaccagcaacgacgagccctgctgcagctgctcccctgaaaacaacaacaaaaacaacgacggcggcggaggcggatgcgacggcggcgagcaccagaaggggaagtcgtggaggaggtggcagtacaggagatgcggcggcggtggcggtggcgggggcgggaggaagaacgccatcctcggggacgcggccgacgtgaagacggcggcggggttcgcggagaggtacaggctgggggcggagctggggcgcggggagttcggggtgacgcggcggtgctccgacgcggccaccggggaggccctggcctgcaagacgatccgccggaagcggctgcgccggtgccgcggcgacgccgaggacgtgcggcgggaggtggagatcctccgccgcatctccgccctcggcgccggcgccgactccgtggtgcgactccgcgacgcctgcgaggactccgacggcgtccacctcgtcatggagctctgcgagggcggcgagctcttcgaccgcatcttcgcccgcggccactacaccgagcgcgccgccgccaagctcgcccgcaccatcgtcggcgtcgtccagctgtgccacgagaacggggtgatgcacagagacctgaagccggagaacttcctgttcgccaacaagtcggaggactcacctctcaaggccatcgatttcggcctctcggtgttcttcaagccaggagaaagattcacccaggtggttgggagcacatactacatggcaccagaggttctcaacagaagctatggcccagaagcagatgtctggagcgccggcgtcatcctctacatcctgctctgcggagttcctcctttctggggagacaatgatgagaaaacggtgacggcgatactccagggtgggatcaacttccagagggagccatggcccaaggtgtccccgcatgcaaaggaccttgtcagcaagatgcttgaccccgatccttctacccggttgacagcaaaggaagtccttgagcatccttggctcaagaatgccgatagggctccaaacgtttcgctcggagagattgttcgatccagactgatgcaattctcagccatgaataagttcaaaaagaaggcacttggagtcgttgccaagaatttaccggtggaggagatggataaatatactcagatgttccacaagatggacaaagacaacagcggtaatttgacgcttgaggatctgaagttgggcctccagataaatggtcatcctgttccagagacagagatcgaaatgctgttagaagctggtgacatagatggaaatggaacattagattgcgaggagtttgtaacggtattacttcacataaagaagatgagtaatgaggagtacctacctaaagctttcaagttcttcgacaaagatggtaatggtttcattgaaatggaggagttgatggatgctttaggtgatgaactgggccctactgagcaagtggttaaagatattattcgagacattgacactgataaggatggtcgcattagctatcaggagtttgaatcaatgatgatatctggatcagactggagaaatgcttcccgacgatactcaaaagcaaatttcagctccctcagtcgtaagctgtgcaaaggaaattcatga</cdnaseq>

Protein Sequence

<aaseq>MGGCSSAFAVSTRMIRFSRGRVPAAILPVTSNDEPCCSCSPENN NKNNDGGGGGCDGGEHQKGKSWRRWQYRRCGGGGGGGGGRKNAILGDAADVKTAAGFA ERYRLGAELGRGEFGVTRRCSDAATGEALACKTIRRKRLRRCRGDAEDVRREVEILRR ISALGAGADSVVRLRDACEDSDGVHLVMELCEGGELFDRIFARGHYTERAAAKLARTI VGVVQLCHENGVMHRDLKPENFLFANKSEDSPLKAIDFGLSVFFKPGERFTQVVGSTY YMAPEVLNRSYGPEADVWSAGVILYILLCGVPPFWGDNDEKTVTAILQGGINFQREPW PKVSPHAKDLVSKMLDPDPSTRLTAKEVLEHPWLKNADRAPNVSLGEIVRSRLMQFSA MNKFKKKALGVVAKNLPVEEMDKYTQMFHKMDKDNSGNLTLEDLKLGLQINGHPVPET EIEMLLEAGDIDGNGTLDCEEFVTVLLHIKKMSNEEYLPKAFKFFDKDGNGFIEMEEL MDALGDELGPTEQVVKDIIRDIDTDKDGRISYQEFESMMISGSDWRNASRRYSKANFS SLSRKLCKGNS</aaseq>

Gene Sequence

<dnaseqindica>3351..3482#2517..2744#2051..2218#1850..1965#1490..1642#1206..1349#946..1069#116..784#acgcgcgcggcgcgaggaggcgggggagggcgaggcgacgcgcgggaaaaggggggaggaggctggagggagcaaagcatccatctgcggcgtcggcgtcggcgtcggcgacgccatgggtggctgctcctccgccttcgcggtttccaccaggatgatccgcttcagccgcggccgcgtgccggcggccatcctccccgtcaccagcaacgacgagccctgctgcagctgctcccctgaaaacaacaacaaaaacaacgacggcggcggaggcggatgcgacggcggcgagcaccagaaggggaagtcgtggaggaggtggcagtacaggagatgcggcggcggtggcggtggcgggggcgggaggaagaacgccatcctcggggacgcggccgacgtgaagacggcggcggggttcgcggagaggtacaggctgggggcggagctggggcgcggggagttcggggtgacgcggcggtgctccgacgcggccaccggggaggccctggcctgcaagacgatccgccggaagcggctgcgccggtgccgcggcgacgccgaggacgtgcggcgggaggtggagatcctccgccgcatctccgccctcggcgccggcgccgactccgtggtgcgactccgcgacgcctgcgaggactccgacggcgtccacctcgtcatggagctctgcgagggcggcgagctcttcgaccgcatcttcgcccgcggccactacaccgagcgcgccgccgccaagctcgcccgcaccatcgtcggcgtcgtccaggcacctccttaaccccccacccgccattgccattgcatcgaatgctctgccattgattcttgcatcctgttcaaccatcaacatcgccattgattcttgcatcctgttcaaccatcaacgtcacttggtgtagtgcatgaatcaatgcatgttgcatgcagctgtgccacgagaacggggtgatgcacagagacctgaagccggagaacttcctgttcgccaacaagtcggaggactcacctctcaaggccatcgatttcggcctctcggtgttcttcaagccaggtaggaaggaactcactactcaacaacacaattatactatgtgatcacgcactggacatgcagcaaagaacgcaaagaaaatcaaatccgaacgaacttaagtctcaaatctcaattacctggctcttggctgcaggagaaagattcacccaggtggttgggagcacatactacatggcaccagaggttctcaacagaagctatggcccagaagcagatgtctggagcgccggcgtcatcctctacatcctgctctgcggagttcctcctttctggggaggtgaatcgaaccatccatgctttctctgcttgttcttcaccacaatagctagcagaatgtgttagataaaaggatacttctctgataattactggtgctgatcgatcgctgatgcctcctcctttgccaacgatgtgcagacaatgatgagaaaacggtgacggcgatactccagggtgggatcaacttccagagggagccatggcccaaggtgtccccgcatgcaaaggaccttgtcagcaagatgcttgaccccgatccttctacccggttgacagcaaaggaagtccttggtaaaaacaaccttcatccagttcagattcttttttttaaaaaaacgaatctcattcagttcaaattcaagttcatagccatatcgaaatctagaattttgccatgtctttgacattattgcaaaaagggggaagtttaataatgtacagtaagtagtgttacattacatgctcagttgagattgtttctcctcctgcaaaaaacagagcatccttggctcaagaatgccgatagggctccaaacgtttcgctcggagagattgttcgatccagactgatgcaattctcagccatgaataagttcaaaaagaaggcacttggagtaagttgcagagaacctgctgctactattcttattttcttcaaatgtggtgtacttcttcactgtgaagcatttgccgatgaaggtcgttgccaagaatttaccggtggaggagatggataaatatactcagatgttccacaagatggacaaagacaacagcggtaatttgacgcttgaggatctgaagttgggcctccagataaatggtcatcctgttccagagacagagatcgaaatgctgttagaagctgtgagtgctttattatatccattcccatagcactatatttcgttattcttttataatttagagtttagaataactggggtaccggcagctgaattaaaatgaataaaatgagagcagtacaaatgcaattgtaaatactactatgacataagtctaaatacatgtcatcattgcaaccaagtatctgtccaaattgtactgttgttttttacacctaatacaccagaggtacatagattgattaatgtaacttgacattgcagtgctgaatgttctgacaaatttcttccttttccagggtgacatagatggaaatggaacattagattgcgaggagtttgtaacggtattacttcacataaagaagatgagtaatgaggagtacctacctaaagctttcaagttcttcgacaaagatggtaatggtttcattgaaatggaggagttgatggatgctttaggtgatgaactgggccctactgagcaagtggttaaagatattattcgagacattgacactgataaggtcagttctaaccaattaattaaactttcaaccacttaaagatgtatcatattgtgtttgagtgtagatttcaccagttacaaaattctaaagcctttctttagccattttggggcctggaactgcacgcaaatcaaacccatttccaacaaaactaaggtagtattaagctgactggattatttaccctaaacccccaaatcaactaagccagaaaaagtagaaaaccacacaattttcaactatttccagtaagagaaaactgaaaattaataagcgaccccccccctcccctttttttttcccaaaaactataaatagtttacaaaagaaatgttacattgggcagattcgaagcaaatcagcaacaaattcccatttcacaaaacttgctgaattctaggcatagtctactaaacttagtcttctcttcttttttttagcaaaatatcttggatcctcatccaagtgtacaagaaacccaggaagcaacagtaatttgatggtttcctatccatgtttttttttccagttggggtttacactttacacacatgtatcaatacttcaatagtataactgacatgttgtgcatatattcaacaggatggtcgcattagctatcaggagtttgaatcaatgatgatatctggatcagactggagaaatgcttcccgacgatactcaaaagcaaatttcagctccctcagtcgtaagctgtgcaaaggaaattcatgaaacagaggaggatctgagcaacagttacttactgagtgcatcaagcaatcaactaaaaacaaagcatcagtggacagcctaaaatataaaaccagattactgggtagaggacatcagcagggtgaaaggagattttgtatctcagttgcatagatgacaaggttcatcaagcagcgagccctatagcatcgtcccttgtaatggaatcaagacattccatatctaggatatatattcatgacttagcataggcacatgtaagggaagcgccgacatgcaatccacttaccaaatgttgatgttttactactttgccaaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0514200, RefSeq:Os09g0514200