Os01g0188800

From RiceWiki
Revision as of 18:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0188800

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001185284.1 GI:297719702 GeneID:9267956

Length

2973 bp

Definition

Oryza sativa Japonica Group Os01g0188800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4752606..4755578

Sequence Coding Region

4752606..4752706,4754039..4755578

Expression

GEO Profiles:Os01g0188800

Genome Context

<gbrowseImage1> name=NC_008394:4752606..4755578 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4752606..4755578 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggatccccaccacggagacggagacggggacggggacacggattcccagccacaggcggcgcaagggatcgtccgacggttcgcgggccagggccgacgcatcccgtcgcggaccaacgccgaccaaggagacggagattcccgggcggccgctgaagcgatcctcctcaaccctatcgttggacgacgccgccggcgcctccaatccgacctcgacctgggcgatcctgaatcggtacggcgcccggagggattccttccgccgcgacgaccgcgaccgcaccacgtcggcggtctcctacacctccggcggcgaccagatctccgtctccttcgagctcgtgaagccgccggagacctccctcctcaccctcgactggccgcaggggccccgcccgtcgctgggaaccacatcctacccatacgtcatcgccgcgcacggcaacgtcgtcctgttccagatcgtctcccccgacaagcacgctcgcccttccgccatcgactacttcgtctacaatgccagccgcagcagcagcagcaaccaccacccctccttgacgcggctgcccgtttcctactggaggaggggagacaccatccgcccgcgcatcatgagcagggaaggcacatgtattttgtcctgcggcagcaagaattcttcgtcgttcgttgtggctgagctcgagagaagatcatgccaatcttccgaaaccaacgtctacctcttcgcttctggctctgacgactggagagtcttcaggaatgtgccgatccgccatggcgacgccctcgctcacctgtgctgctggacgactgatgcggtgttgtcgtgccacgatcgctacatgatctgggtggactacttggtagcagggatgatcgtcgccaatgtagaacatccaggaagggttgacccaccggagcctgttctatggtacgtgccacttccggtcgatccagttgctgacattgatcgtgggcgaggatgccctcaagcctcccgtagtctgtgtgccacccaccatggcatcaagttcgtcaatgttaaccaacatggcggcagcagcagcagaagcttcagcatcaccctgtggtcgtggcacgaggatcagacatggcgagaagatgcaacattggatgctgcccaactttgggaactcgattctgaaaaccgccttccaaatgtccgacctgaattccccgttgttgatatggaaaacccttacgccgtttgcttcttgttgaacgagcgctaccacactgctgaccccaatgccacaacgtggatgatcaaggtgcacatgaagaagaaggttctactagattgtaccggttattccaacaaaggaagctcttctactgccagaaggatgtctgaggggctctccttcatctccagcgaaatgccatcttacctgtctggaaaaaccatcaaaaggtttttggaaggaccgctatggccagcaactcatgatgcgatcgagatcgaagagaatgggaagatgggatttccaaaaaaacaaaaaaagtatactgttcctcatcaacatcgatcacgagatgtacgggactcccctcgtgtattcccaaagaaaacagagatgggcccggcccaacttgtgtatgctatgctatag</cdnaseq>

Protein Sequence

<aaseq>MRIPTTETETGTGTRIPSHRRRKGSSDGSRARADASRRGPTPTK ETEIPGRPLKRSSSTLSLDDAAGASNPTSTWAILNRYGARRDSFRRDDRDRTTSAVSY TSGGDQISVSFELVKPPETSLLTLDWPQGPRPSLGTTSYPYVIAAHGNVVLFQIVSPD KHARPSAIDYFVYNASRSSSSNHHPSLTRLPVSYWRRGDTIRPRIMSREGTCILSCGS KNSSSFVVAELERRSCQSSETNVYLFASGSDDWRVFRNVPIRHGDALAHLCCWTTDAV LSCHDRYMIWVDYLVAGMIVANVEHPGRVDPPEPVLWYVPLPVDPVADIDRGRGCPQA SRSLCATHHGIKFVNVNQHGGSSSRSFSITLWSWHEDQTWREDATLDAAQLWELDSEN RLPNVRPEFPVVDMENPYAVCFLLNERYHTADPNATTWMIKVHMKKKVLLDCTGYSNK GSSSTARRMSEGLSFISSEMPSYLSGKTIKRFLEGPLWPATHDAIEIEENGKMGFPKK QKKYTVPHQHRSRDVRDSPRVFPKKTEMGPAQLVYAML</aaseq>

Gene Sequence

<dnaseqindica>2873..2973#1..1540#atgcggatccccaccacggagacggagacggggacggggacacggattcccagccacaggcggcgcaagggatcgtccgacggttcgcgggccagggccgacgcatcccgtcgcggaccaacgccgaccaaggagacggagattcccgggcggccgctgaagcgatcctcctcaaccctatcgttggacgacgccgccggcgcctccaatccgacctcgacctgggcgatcctgaatcggtacggcgcccggagggattccttccgccgcgacgaccgcgaccgcaccacgtcggcggtctcctacacctccggcggcgaccagatctccgtctccttcgagctcgtgaagccgccggagacctccctcctcaccctcgactggccgcaggggccccgcccgtcgctgggaaccacatcctacccatacgtcatcgccgcgcacggcaacgtcgtcctgttccagatcgtctcccccgacaagcacgctcgcccttccgccatcgactacttcgtctacaatgccagccgcagcagcagcagcaaccaccacccctccttgacgcggctgcccgtttcctactggaggaggggagacaccatccgcccgcgcatcatgagcagggaaggcacatgtattttgtcctgcggcagcaagaattcttcgtcgttcgttgtggctgagctcgagagaagatcatgccaatcttccgaaaccaacgtctacctcttcgcttctggctctgacgactggagagtcttcaggaatgtgccgatccgccatggcgacgccctcgctcacctgtgctgctggacgactgatgcggtgttgtcgtgccacgatcgctacatgatctgggtggactacttggtagcagggatgatcgtcgccaatgtagaacatccaggaagggttgacccaccggagcctgttctatggtacgtgccacttccggtcgatccagttgctgacattgatcgtgggcgaggatgccctcaagcctcccgtagtctgtgtgccacccaccatggcatcaagttcgtcaatgttaaccaacatggcggcagcagcagcagaagcttcagcatcaccctgtggtcgtggcacgaggatcagacatggcgagaagatgcaacattggatgctgcccaactttgggaactcgattctgaaaaccgccttccaaatgtccgacctgaattccccgttgttgatatggaaaacccttacgccgtttgcttcttgttgaacgagcgctaccacactgctgaccccaatgccacaacgtggatgatcaaggtgcacatgaagaagaaggttctactagattgtaccggttattccaacaaaggaagctcttctactgccagaaggatgtctgaggggctctccttcatctccagcgaaatgccatcttacctgtctggaaaaaccatcaaaaggtttttggaaggaccgctatggccagcaactcatgatgcgatcgagatcgaagagaatgggaagatgggatttccaaaaaaacaaaaaaagtatactggtaaattggcgatcgatgctgatgtattcgtcgctacagttcactatcatgcacttttttttaaaaaaaaaatacagtatgaacatagttgttcataacacgcgcacactcggtggtggcgttctggcccaaaccatctctaacccgccccgttgccactcctagatgtcatgcaaaaatttaatcagtggaggataaaatatacatatacagaccttcaattttgaagagcacgaaccaccaccaaagcttaaaactccaactttaccaaattccagattgctgtctcttgtataccaatttcgctatatcattcccccacaccgttttgcgtggatatatagtagatataatttgggattgttcgaatgtcaatggcccgaacctgcaatttgagcctatatgattttggctttcagactttcagtatgcaagcatgtagaattttcatgatagatggtgcagttgtccatcaaaatcgatcacaagaagcacgggaaactggggtcggaaaacaaaactccaaaccctcacattgtccatataatatgtaaggcaggggttcggaaaaagaaactccgaacctcctgcgaaaaaagaacgagaggtcagtttggccacaattccttcacaccaaaataagtattggagatgatccaggtccgtgacacgtgcaccgcctagtttcatcatgaaattagaaatacatgtgcatctaggtttcttgtcgatttgaaatgtgtggatttgtctgttctattttcactcgtatcgttttctatttcttccagagcaacagtgttgacagttgtgccccgggtgtgtgcaaggcccgctcgatcagagatgatcgaagggcgccattattacaaagcccacgcaaactggggtgttggtcggagaacaaaactccgatccctactcaaacaaagagccaattccaattctgacaattctgtcggatacatttcatgattctcgcttgctaacatgctgaacagtacaccgacgcggaggacgagcggcatctggagaacgccatgaccagcaattcatcagctggtgggcttcggtgaattaaattccgaccctcctcctctctctcctcggtgaccttgatcgatcggcgtccgcctccacgggaacgctatcagagcattgagctttgaggcgatgggagatgagattagtagatgtgaggcagtttatatgcatggttgttcgaatcgaacgtcaatgcctcaattgccgaacctgcaacttatgatttttggctttaatttcagactttgtcagtatgttagcatgtagaatttgcatgctttgatgcagttcctcatcaacatcgatcacgagatgtacgggactcccctcgtgtattcccaaagaaaacagagatgggcccggcccaacttgtgtatgctatgctatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0188800, RefSeq:Os01g0188800