Os06g0613500

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0613500| Description = Similar to Helix-loop-helix protein homolog| Version = NM_001064606.1 GI:115468943 GeneID:4341525| Length = 5592 bp|...")
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Gene Name

Os06g0613500

Description

Similar to Helix-loop-helix protein homolog

Version

NM_001064606.1 GI:115468943 GeneID:4341525

Length

5592 bp

Definition

Oryza sativa Japonica Group Os06g0613500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25399244..25404835

Sequence Coding Region

25399709..25399752,25401763..25402000,25402813..25402887,25403000..25403068,25404441..25404506
,25404790..25404834

Expression

GEO Profiles:Os06g0613500

Genome Context

<gbrowseImage1> name=NC_008399:25399244..25404835 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25399244..25404835 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcgagaagagggcaagccaccgacagccacagcctcgccgagcgggcgagacgcgagaagatcaatgcgaggatggagcttctcaaggagctggtccccggatgcagtaaggtatcaggaacagcactggtactggatgagatcatcaatcatgtccaatctcttcaaaggcaagttgagtacttgtcaatgaggctcgcagctgtaaatccgagggtcgactttggtgggctagacaacttcttgactacggagtgtggaaggataacaggcttgaactacaagaatggaatggatttggagcaggtcacctggccagacatgggcgtccatggagcaaggaatctcatgcaactacaacagcagttctggcatggtgatttagcacacccgctccagccgccttcacagtgggaaaagcggacggataccaatccccctgtctttagcaattcaagttcctccctcttcggctatgatctagcaagctctggagcgccggcccagacaggcaacaagctaaagacggagctgtga</cdnaseq>

Protein Sequence

<aaseq>ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALV LDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKNGMDLEQ VTWPDMGVHGARNLMQLQQQFWHGDLAHPLQPPSQWEKRTDTNPPVFSNSSSSLFGYD LASSGAPAQTGNKLKTEL</aaseq>

Gene Sequence

<dnaseqindica>5084..5127#2836..3073#1949..2023#1768..1836#330..395#2..46#ggcgagaagagggcaagccaccgacagccacagcctcgccgagcgggtgagttcgtgagttcgccgtcgccggcaggctcgccgctaatcacccacttaattaatcactcgctaaaccttaagccaatctcctcgcgggattagatttgtggggtttaatttaatttaacgagctgtggattaggcaatgattgggtaattaggacgtggcgacgtcgctgttttagtgccttttcaggggttgctttcctcgttaattacttaattattcgtttcctcttggattttttatgacattattattatcattttttttgggtgataaacaggcgagacgcgagaagatcaatgcgaggatggagcttctcaaggagctggtccccggatgcagtaaggtcagcaatatcttcttggcttcgaatttcttctacaaatttattttgctgagtttttctaagagataaacttcttccagcttttgcctttggaaggatacaattgccaaggagttttgtgcaaagtacactccttttttttcctgctttcggtggtctttttactgcttttgatggcttagtgaaatttgtcatcgcatagctgtttctgttcggtccaaaggcacactaggagtccaacaaagagtaatgccaagcgttggtgtgcagcagcagcagcatggtcagtctgcttggctcatttcttgcaaattcacagctcgatccaatacaatgcgatcttaaacgtggtggtgcggagtttatccttcgctctggcaaggcatggcgacatgtccatatgggcgagttgcattgcacgacggaggagaagtgggcgtggtggataatatggcatttggtttggttcccttggcccttgtggatgataagggagacaccttgatccggtgtacctaactcgagagggtgaggggatggggtttggcccttggtggtgggttgtctgggcagaatgtggcagccactttaaaagacaccggaggacggtagcttaatggaggggggcttgtatgtttggtcgctgtaatgctgcaatgagtccatctccatatctccatctctctctctctcactttggaatgttgctatccctattgcacacgcaataatgtgtgcttatgggttggcatctctgggtgttggattgtggaagtaaggctgtgagggtagtttaccattggggagtattggttggtcttcattaactatgaattcatgtggaagtgattagcctgttgtattggtgcggtagtttgactattatttttactgaaaggacagcagcctttgggctggaggtgtccatcactgtgaatgattgtattggtcaatccgctgtgggatttatgagggccattgtcttaaacaaaccagtacattactgccaatataagctggtggttttgttgtatatgcttagagcttctctaactaattaacttaacagtcgtaaacaggcctattttaagatcacatttcaaactttgaaaaaaatgaagagtagtactatgcaccaacttctgcacttggattctgcaaccaaactgctgctgctattttgtttcatgttcttgttttatagtggtagctccattctttatatccaaaactgaggttaaactttatgtggttttgtcatagttttgaattgttttttttttccatcatgagattcattgttttattgtagtaactcaggaaaagtaattactttatcgacaacagttgtttgatctgttttttgtagcaggtatcaggaacagcactggtactggatgagatcatcaatcatgtccaatctcttcaaaggcaagttgaggtaactgttctttttttttttttttgcttatgataccttaagtcccaaataacccatttaccttaagatgttcactcatgtcattgttgtttggtaattttgattgtttcagtacttgtcaatgaggctcgcagctgtaaatccgagggtcgactttggtgggctagacaacttcttgactacggaggtaccattatgacaaatactgtttcttgaagatttctgcaagtttagcttgcgtggatttacaacaacaatttcctgtgtatatgtattgctcccttcttgcccacatatcgacctttttttttaatactggaaaatgctttgatacttcgccaatacgcatatatccgtatcagttgcctattggatactgagatggcagtttagggaagtatcagtgattcatagaccatagctgatttctttggcccagaactctcctttaaattattttgtaactgagtagtttggcctctgctgaaaactgaaatttatctcttcccatcatttatttgcactattttgtactagtaaggagagtgtgcatttctgtgaaacttattgttcgtgcttttgactttgccttgacagccaacagtctacaattattccatataaattttgcctttgacctcttaaagagaaagaatgcctactactattagtacaataagtagtatctagatggctaacacttgaacaatggttaccttagaatgcctagaactagttacttttacaattaaggcatcattgataatgataatattgctcttggagatatatgcatgattagaccattgtagctggatcacatgttttctgcagaattttgcatttgtgaaattccatgtaaattttctattatgcatgtcgtgtaattctgtaaatctctcagaaataacaaattcaattaaagttgatcatgattcacattttaggttcattgattatgctattgggcatatactctgcttactatggtatttatagtgtggaaggataacaggcttgaactacaagaatggaatggatttggagcaggtcacctggccagacatgggcgtccatggagcaaggaatctcatgcaactacaacagcagttctggcatggtgatttagcacacccgctccagccgccttcacagtgggaaaagcggacggataccaatccccctgtctttagcaattcaagttcctccctcttcggctatgatctagcaagctctggtaaaacttgcaaccaaacctatatctcattgaatttagttgtttgtcatttacttttaaaatttttcagccttgattggaccacaacttttgtctctttcgttgttccagagtgtttagaagtacataggtaaatgggaaattgtggtaaaatatgtgaaaaaccagtttcttccagggaaaactactactacatctttaggaaagattatcataccttatctcatgcacatgctaataaaagtacttgttataaattctacataaataaataatatttaccttctgatttggatgtgatggagatgactatcctaattgggcccgcttctatttgatagtgaatgtttattagcaactagggggtttaaggaagcaggaacttgtaactttctagaaagattagagaatgctttgtttgttcttcttccctttgtttgttcactcaatcattattgccatcatcgccaccattttggatggtaaggggccatagatgtgttcgtctggtggatctgttctctctggcaccagcggacccaactggttggtgtggctgggcccgaatcaataaatgcatgtctagaaaccatatcgctcccggctttccgtttgggcttggctgcataaggcctgtagatgcagatctggtccctttggcccttctgatcacttgtacaactgtgaagggtccactttttctgtaagttgtccagtgcctgtctagggatcccctttcttgcaatggagggagccagctaaaacaactttaatctcagtgctactatttgtacgctgtactgtagtattgttttctattcaactagttgaatagcaaatacataagcgaatctaagggtttggatcttaatttgacatatctaacgacgataatttcattcgattatggcaattcatgtgggctagatttacgtttgcattgcatgacatacattttgcgtgccatttgactgtccttgtaactagagatgtagttttatcactgggtagctgggtactgaagtttgtagtggatcctatatatttatcaaggaatacaccgtagcacatggttcagtttaagaggtcgattatatagcttggctaagagagtggattggataactagtacagatattgtgagagccaaatgagccagctccattgtctaagaatcatgttttagcactatcatgaagttatactcttgcatttgctaatgagtaagatggaagaaaaggtgtgtagtagaggtgatctgccgtttggatctggttaactgatctgcagctctggatccaagcagagctcttggagggacaaatgctattggaggtacagacccaatcatgcaaagcgttcaaggatcattaaacctttagggccctcccctgaggccctgactacatgatatctgtactgcattacggctggcagaatctgtttttgccagaaattattgcagcttcttcgtgtaccggtgtctgcgctcaaagctgagtggtatacagcaagctttgtccagtcctccccagccatcatctttatcacgcggcccatccccttgcagctctgtcttagcagggcagatctcaacctcatggcttcacattgaaatggacccaacttggtgccgttctaatctctgtggttcagctcattcgctttgcattcctcgaaaatagacggtcttgctgaattccccttgctactgacaatgttatcctatgcatgcatttttggacctttcttttttggctttcgtatataatttcaagaaactactgaataggactataggagtactcaattaacttatgcaagactggttttggcaaattcttggaatttgactgatctgaactgaaccccctttttacctgttaccagctggtcacttgatgctgtcctagctactattgtcctcccctcttgaaatcattgtaccccaggaaccctaccactaactttgacctcttctactttttttttccccatgtctttgtgcaggagcgccggcccagacaggcaacaagctaaagacggagctgtgagcctgtgaccaacggtggtggtagtgatagcaagcaggtcagcagagcaagccaaacaaacatacgtgagctgtggacaatggcggctggatgtcaggagagctagctagctagctaggcgtgagctgtggactgacggctgctgctgctgctgctgctgctgtggatggttggcaacgtcttgtgcagtgcagcagtgcggtgcatgggactttcattgattttggaggccggattctgagacgatgtacatatggaatgcaagatatagagagatactgttgttgctgttgttggagactcttggagctggaggtgatggatatggaggttttactgctgctatctttttttgtagagatgagcgagagatactgtggattcttttcttgctgatgtattcttggtgtatgcctgactacgatggtttaatgtcaaggttatatgagcagcatttatttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0613500, RefSeq:Os06g0613500