Os06g0613800

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0613800| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001187973.1 GI:297725076 GeneID:9...")
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Gene Name

Os06g0613800

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001187973.1 GI:297725076 GeneID:9272153

Length

10581 bp

Definition

Oryza sativa Japonica Group Os06g0613800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25419392..25429972

Sequence Coding Region

25419392..25419464,25419733..25419867,25419931..25420106,25420443..25420573,25420959..25421032
,25421752..25421820,25422001..25422069,25422198..25422251,25422327..25422392
,25422490..25422609,25429152..25429279,25429354..25429629,25429760..25429884
,25429969..25429972

Expression

GEO Profiles:Os06g0613800

Genome Context

<gbrowseImage1> name=NC_008399:25419392..25429972 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25419392..25429972 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctaaacgaaggggcaattgctcgagctcaaatgaagagaagaaaacttgcacaaatagtagaaagaaaggagatcagacgcatttttcaggcacaggcatagttgtcagaaacaaagatgaagtaactacaagtattctaacttcagcaaatgtgattagatgttttgatgatgacagcaagatcaatccgtttttggatgttgtgttgcttgcattatcactgcagattcgagttctgcttccaaataagcaacgtgtcatcgggtggatgggacactttgacttaaactacaatattgctgttgtggtgatcaaatatttacctggtttgcgagctgcgtcttttgatcacgaagtgcgatttgggtcccaaagtaaggatatggctggaggaccactcattgatttggatgggaactttgttggcatgaactttttttcggaggagaggactccattcctaccaaggaacaaaatttaccgaagcttggtgcgatcttgcacactctgggttgaaatcgacgatgaatgcacaagcataattgaaagatgcagatctaagatgatacacaacaattttgttggtacctcaagaggagtggcaaaaaaaaggaaccaggagcaaaccgtatccatcacaagcttttcagaaggtacttcagatgaagagaatgaaagtgagactcagaagcttcctgaatattctacaagtgattcagaagatttctgggaggaggaattgtttcctgaacttattaagcccttgccagatgatgaattcacgcagcttttgaaaaaggatctaaagtctcgtaattatcccatgccaatcaggttttgggggggtatgcgcttgaaaaatacttttgaagaggaatttgctgaagatacatggtgcaaactgagtaaaaaggttgctttaaatacatcccaaagtgttgtctcacttgcttcgttcaaaggagaagaaaggttttttgcttgcacaggtgtatttatagacttcaatggatccacatcaagagttgtgacttcagcaagtttggttagaatatctgctgatgaaaacaagattgctgataacctgaagattaaagtgtaccttccaaataaacgaatcgccgtaggcgaattgcagcattgcaatttgagctacaatattgctgtggtcagtgtcaagggtttctgttgtcttcggacagcagaactcgacaaacagatgcaaatcgaacctcatagggaggtagtagctataggacgtatctttgaatcaggcaaattaatggctacaagtgggatattgtctgacgaggaaagcaagcttgactgcagagagcttatgatctccacttgtaaaatcactaaggccggtattggaggaccactgattgattttgatgggaatttcgttggcataaacttctatggaacaaaagaaacacattatctaccacgattaatgatacagagactattgaaggattttgacgggtaa</cdnaseq>

Protein Sequence

<aaseq>MSKRRGNCSSSNEEKKTCTNSRKKGDQTHFSGTGIVVRNKDEVT TSILTSANVIRCFDDDSKINPFLDVVLLALSLQIRVLLPNKQRVIGWMGHFDLNYNIA VVVIKYLPGLRAASFDHEVRFGSQSKDMAGGPLIDLDGNFVGMNFFSEERTPFLPRNK IYRSLVRSCTLWVEIDDECTSIIERCRSKMIHNNFVGTSRGVAKKRNQEQTVSITSFS EGTSDEENESETQKLPEYSTSDSEDFWEEELFPELIKPLPDDEFTQLLKKDLKSRNYP MPIRFWGGMRLKNTFEEEFAEDTWCKLSKKVALNTSQSVVSLASFKGEERFFACTGVF IDFNGSTSRVVTSASLVRISADENKIADNLKIKVYLPNKRIAVGELQHCNLSYNIAVV SVKGFCCLRTAELDKQMQIEPHREVVAIGRIFESGKLMATSGILSDEESKLDCRELMI STCKITKAGIGGPLIDFDGNFVGINFYGTKETHYLPRLMIQRLLKDFDG</aaseq>

Gene Sequence

<dnaseqindica>1..73#342..476#540..715#1052..1182#1568..1641#2361..2429#2610..2678#2807..2860#2936..3001#3099..3218#9761..9888#9963..10238#10369..10493#10578..10581#atgtctaaacgaaggggcaattgctcgagctcaaatgaagagaagaaaacttgcacaaatagtagaaagaaaggtgagtccgttcttgaatgttgattcacttccgccatttcttacatgtatttacacagctctaaatgtgttgcttttgaagaggaatctggtagcttaattgattatagtgaaggtgcctagagtggactcagtcaagaagtcatttcaaacttatctgaaactgttgtctcagtggcttcattcaatggtgagtgcctatacaaattagttttccatatatgtatctgatcatcagttctaaacattgaagatattatcttgtgcaggagatcagacgcatttttcaggcacaggcatagttgtcagaaacaaagatgaagtaactacaagtattctaacttcagcaaatgtgattagatgttttgatgatgacagcaagatcaatccgtttttggatgttggtacccctaattttctctgcactctgttacttacctgtttaagatatgataataattctgcagtgttgcttgcattatcactgcagattcgagttctgcttccaaataagcaacgtgtcatcgggtggatgggacactttgacttaaactacaatattgctgttgtggtgatcaaatatttacctggtttgcgagctgcgtcttttgatcacgaagtgcgatttgggtcccaaagtaaggtagtagctgtagggcgttccttcaactcaggcaaattgatggcgttatctgggatagtgactgatgggccaacagattatcctgaacaccttatgatctccacatgtaaaatcactaaggtgcactgctgatatctcttctttcttctcggtattgtggaaattaataattgtctcatgatatgagtagcagaatttatcactagttcactacatacactgtactatatcgtttggggccttaaacatttcattctcttcatgtagttttttcattcaatatggttttatttttgtgcttatcttagctcagtgtgacagtatattttcttccaggatatggctggaggaccactcattgatttggatgggaactttgttggcatgaactttttttcggaggagaggactccattcctaccaaggaacaaaatttaccgaagcttggtgcgatcttgcacactctggtatgcctcgtactttcattcagatcctccaaacagtcaaacacttgccaagccagattgagctagaaatagtttagggggttaagtgctcccgcaaaatagtagttcgagggattaaagtggacctttttcatttttatttgacagcctatcacataatagcgatttggttttgcacatagtactatgttattataactctgctagataaagcaatatattactatgttttgcacgccctatagctgatttccataatatgcttcttatggatggaagtgttaatcttgatagtatttttgattagctatatgcaatccattctttttggggatcagcagctctgtgtatttgcactataagagtatactacattctgctgcagggttgaaatcgacgatgaatgcacaagcataattgaaagatgcagatctaagatgatacacaacaattttgttggtgagttcatcagttgaagcacaatcactctttgaaactgctaaattgtttattgtcagaaatctatcttcattaatgtatattattaatccttggttgtagtttcctctcctgtgggtaaagcttaactttgtggtgttccctctgctcataaattggatatatttgttaggggtatagtagataagatgcttatcttgttttgcagtatgaaatatgccatgtatctatatatctatgtactaatatgaaagatggtagtggtggtagtgaatttaccaccaccaccatccaactaccattcgggaccacaaagagtgagacaaagaatttcctgtctcctataccccacaggccacagaccccgccagaagaaaaatatgacaatcgaatattatggaatttttcatctataaagtaacagaaaaagtagcatgatgataatatgttggacaatagaaacaacatttttatgggctttaaaatatatacggtacaataagttattctttaaaaaagaaaatccattgcagcaaacgggcaatatgctagtttttcaataataatataaaataaatgcactccatatttgtggaacagggtagatagtataatcactataataacatgtaaggtttgtaatctactgttgatgccctggatagagcattgcgttgttttaattatgttcattcatttcatttgttttcccgctttaggtacctcaagaggagtggcaaaaaaaaggaaccaggagcaaaccgtatccatcacaagcttttcagaaggtgaaccaagatgagccaatcaagtatcaagttctaactgttattaaatgatcatgcaaactgtcctcgtattataatgttattacttattagtcatttctaatgcagggtcattaatctctcattgcttgttttgagttttgttcgtttttcttgcttattttttaaattttattttaggtacttcagatgaagagaatgaaagtgagactcagaagcttcctgaatattctacaagtgattcagaaggtgaatcgagctaggttatttctaactgattgttaccaaattatcatgcaagctctcagcatgttataatgctgcttattgatcactaccagaacatgtaaattaatcgcttcaccttgttgcaccagatttctgggaggaggaattgtttcctgaacttattaagcccttgccagatgatggtcagtcattgctttcagttttgctagctattagtatcacatgatcattatttactcttcaccttgttgcaccagaattcacgcagcttttgaaaaaggatctaaagtctcgtaattatcccatgccaatcaggttttggggtgagtcattgctttcacttttgctggttacttttgttgcacattttgacggtattttctagcaaactcaactgtagttttatgtttttttaaccagggggtatgcgcttgaaaaatacttttgaagaggaatttgctgaagatacatggtgcaaactgagtaaaaaggttgctttaaatacatcccaaagtgttgtctcacttgcttcgttcaaaggtgagattacaatgttatatgatctttgttggaattaatgaatgggccttagcccactcgaagattaattctttggaaaatcacaaaagcccacctcatgggatggcatgcatgtggagtttagtaccaccttgcttattctaggagagggggacctccttaaaagggaggatgccctcctagccacttgaagcatgtgtggtggagagaagaggggaaacgcgcgcgctcgctcgcctggcctggcaaggcaggcggcgcgcgtgcacgacgtacgcgtcgaatggtccgaaaaattggctcctcacccttgcgcagatgcagcctccttttgcagttttgttttgctgcaaattcggattcgttttgttttggaaacgttccgaaaaatccggtgcgtgcaaacggcgtggagtccggataagttacgcgcgacttatccggttcggttacgcgcagtagagatcgtgcgggcgccctgatcaagcgacccttctctatataaaccgacccgccgtcttcacgcaatatatgcgaaaatcaatctagggtttgcctcctactctgtactgcgccgtcgctcgtagactactccatcccgctcgccggcgtgcaccagcgatcgggagagcaggtctccggaacctctgcctttgacgtcctgcaccgggagaaggcggcaataaggtttttgggaagcgcttcgcgcgactgctccctgttcgttcgcgacggctcgccttcctcttcgctcgcgtgtttcgtgccttcgtagacacctgcgaaaagtttcgaccaagcagccggtcttttcgtcacctcggtacgtgttcaatatgttgcgcatatttgatctgttcatgttattctgcgtagtttacatgtgtagatctaatgatgcgttcatgctagttttcatctgtaatgtcatgatttatttatggaataaattaaatccttatatgcccataatctcaacaatccaaaaaccttattataggcactgtgattttactatggctggttttgccgatgcactgaggccggataaattcaccggtgtgcattttaagagatggcagatcagggtcactctgtggctgacagctatgaaatgcttctgggtgagtactggcaaacctgaaggagttcttactgctgaacagcagaagcaattcgaggaagccactactctctttgtgggatgcattcttagcgttcttggcgatcgtctggtcgaggtgtatatgcatatgaccgacgctaaggagttgtgggatgcactgaatactaaattcggtgctactgatgctagcaatgatctgtatatcatggagcagtttcatgactacaaaatggctgacaaccgttctgtagtcgaacaggctcatgagatacaaaccatggctaaggaactcgaactccttaagtgtgtcttacccgacaaatttgtggccgggtgcattattgcaaaacttcctccatcttggaggagtttcggtactgcactcaaacacaagagacaggaatactccgttgaggggttgattgcgtctcttgatgttgaggagaaagctcgggaaaaagatgccgcgtctaagggcgatggtgggcagtccagtgccaatgttgtgcacaaggcccagaacaagagcaaggggaaatacaaagctcagcagaccaccaacttcaagaagcagaagaagaacaacaacaatcctaatcaggatgagaggacttgctttgtgtgtggccaagttggtcatctggctaggaagtgtccacaacgcaaggggatgaaggcacctgcagggcagacttctaagtctgctaatgtgaccattggcaacactggagatggaagcgggtatggtaatttacctactgttttttcagttaatcaatctactaattggtgggttgatactggggccaatgtacatgtttgtgctgacatctcattgttttcttcttatcaggtcgcacggggttccaccgtcctaatggggaatgggtcacatgcttctgttcatggtgttggcacggtagatctgaagtttacttcgggaaagatcgtgcagctgaagaacgtgcagcatgtcccttctatcgacaggaatcttgttagtggctcccgtctgactagagacggatttaagttggtttttgagtctaataaagtagtcgtgtctaaacatggatattttattggtaaaggttatgagtgcggaggcctgttccgcttttccctttctgatttctgcaataagtctgtgaaccatatttgtggcagtgtggatgatgaggctaatgtttggcattcacgtttatgtcatattaattttggcttgatgtctcggctttccagcatgtgtttaattcctaagttttccattgtcaaaggttctaagtgccatagttgtgtgcaatcgaagcaacctcgcaagcctcacaaggctgccgaggagagaaacttggcaccactagaactcctacattcagatctttgtgaaatgaatggggtgttgacgaagggtggaaaacgatatttcatgacattgattgatgatgctactagattttgctatgtgtacttgttgaaaacgaaagacgaggctctagactattttaaaatttataaggcagaagttgaaaatcaacttgacagaaagataaaaaggcttaggtctgatcgtggtggagagtttttctcgaacgagtttgacttattctgtgaggaacatggcatcatacatgagaggacgcctccctattctcccgagtctaatgggattgctgaaaggaagaaccgcacactgactgacttggtgaatgccatgttggacaccgcgggactgcctaaggcatggtggggggaggcattgttgacctcaaatcatgtgttaaacagagttcctaacagaaataaggacaaaacaccatatgagatatggattggtagaaaaccatcactttcttatttgcgcacatgggggtgcttggcgaaagtcaatgtaccaataacgaagaagcgcaaacttggacctaagactgtggactgtgtttttctgggatatgctcatcatagcattgcctatagatttttaatagttaaatccgaggtaccggacatgcatgttggtacaattatggagtctcgtgatgctaccttctttgagagcttttttccaatgaaggatacacatagtggttcgaaccaaccctctgaaataattcccagttcaatcacaccaccagaacaaactgaacatacacatgaacttgtctctgaggaggatgtcagtgaagctcctcgaaggagtaagagacaaaggacggctaagtcttttggtgatgatttcactgtgtacctcgtggatgacactcctaagtcaatttcagaagcatatgcatctcctaatgcagactactggaagtaggctgtccgtagtgaaatggattccattatcgctaacgggacttgggaggtgacagagcgaccctatgggtgtaaacctgtggggtgcaagtgggtgttcaagaagaagcttaggcctgacggtactattgaaaagtacaaggctcggcttgttgctaagggctatactcagaaagaaggcgaagatttctttgacacttactcacctgttgctagattgaccacaattcgtgtgctactttccctagcagcctcacatggtcttctcgttcatcaaatggacgttaagacagcttttcttaatggagagctggatgaggagatctatatggatcaacctgatgggtttgtagttgaaggtcaagaaggcaaagtgtgcaaattgttgaagtctttgtatggtctgaaacaagctcctaagcaatggcatgagaaatttgacaaaacattgacatctgcaggctttgcagtcaatgaggcagataaatgtgtgtactatcgccatggtgggggtgagggagttattttgtgcttgtatgttgacgacatactgatatttgggacaaaccttgaggtgataaatgtggttaaatcattcttgtctcaaaattttgatatgaaagatttgggagtagctgatgttatcttaaacattaagctaattagaggtgagaatgggattactctcttgcagtcccattatgtggagaagatcttgaatcgctttggctacattgatagtaagccttctccaacaccttatgatcctagcttgttgcttcgcaagaacaagagaattgctaggaatcaactggaatactcccaaatcattggctcgttgatgtacctggctagtgcaactaggcctgatatctcctttgctgtgagcaagttgagccgatttacttctaatccgggagatgatcactggcgtgcgcttgagcgagtaatgcgctatctgaaaggtactatggaattgggacttcactatactgggtatcctgcggtactggagggttatagtgattctaactggatctctgatgtggatgagatcaaagccactagtggatatgttttcacactgggtggtggtgctgtttcatggaggtcttgcaaacagacaattttgacgaggtcaaccatggaagcagaactaacggcactggatactgctactgttgaggcagaatggctgcgtgatctattaatggatctgcctgttgttgaaaaaccggtgccggctatccttatgaactgtgacaatcaaacggtaattgtcaaagtgaatagttctaaggataatatgaaatcgtctagacatgtgaaaagacgattgaagtctgtcaggaaattaagaaactccggagttataacgttggattacatccaaacagcgagaaacctggcagatcccttcacgaagggactatcacgaaatgtgatagacaatgcatcgaaggagatgggtttgagacccatgtgagttatactatggtggtaacccagtctatgtgatcggagatcccgtgaattagatcctgggaagaacaaaccattaataaactagaggagagtacaaatatatataccctatccaagtgaagatgcatatactcttgtgagctgcaaggcaggttggctatgccttaatgagttctgttggctttaattagcaaagatgttgtcctgcagagcattcttgaaggaactcacctttgtgagcttgactgttggtcgcagtctatgaagattttgggtgaatcttctaggaagcttactaaagacctaggagtatgacttatacgctccacccgaggggtagtctacagacggtctagtaccagataagactttgagtgaaacttgcttgcacaagacttgcaattcaaggcgtagtccattgttcaagttgtgagtaagtgtagcttggagttctaggtggatgttcaaccttaattggtctctatcgaaccgctggtatataaacagtacattggaaaaggcaaatctcagtgggattttgagatttggtgggggattgttggaattaatgaatgggccttagcccactcgaagattaattctttggaaaatcacaaaagcccacctcatgggatggcatgcatgtggagtttagtaccaccttgcttattctaggagagggggacctccttaaaagggaggatgccctcctagccacttgaagcatgtgtggtggagagaagaggggaaacacgcgcgcgctcgctcgcctggcctggcctggcctggcctggcctggcagggcagggcagggcaggcggcgcgcgtgcacgacgtacgcgtcgaatggtccgaaaaattggctcctcacccttgcgcagatgcagcctccttttgcagttttgttttgctgcaaattcggattcgttttgttttggaaacgttccgaaaaatccggtgcgtgcaaacggcgtggagtccggataagttacgcgcgacttatccggttcggttacgcgcagtagagatcgtgcgggcgccctgatcaagcgacccttctctatataaaccgacccgccgtcttcacgcaatatatgcgaaaatcaatctagggtttgcctcctactctgtactgcgccgtcgctcgtagactactccatcccgctcgccggcgtgcaccagcgatcgggagagcaggtctccggaacctctgcctttgacgtcctgcaccgggagaaggcggcaataaggtttttgggaagcgcttcgcgcgactgctccctgttcgttcgcgacggctcgccttcctcttcgctcgcgtgtttcgtgccttcgtagacacctgcgaaaagtttcgaccaagcagccggtcttttcgtcacctcggtacgtgttcaatatgttgcgcatatttgatctgttcatgttattctgcgtagtttacatgtgtagatctaatgatgcgttcatgctagttttcatctgtaatgtcatgatttatttatggaataaattaaatccttatatgcccataatctcaacaatctttacttctccatatttgtctgttttctctattccatcacctgactataattgcaatcactgatctttgtaggagaagaaaggttttttgcttgcacaggtgtatttatagacttcaatggatccacatcaagagttgtgacttcagcaagtttggttagaatatctgctgatgaaaacaagattgctgataacctgaaggttggcatcacaaacactccttttgcttgtgcatttgagatactctttaattctcacattgtgtttcttagcagattaaagtgtaccttccaaataaacgaatcgccgtaggcgaattgcagcattgcaatttgagctacaatattgctgtggtcagtgtcaagggtttctgttgtcttcggacagcagaactcgacaaacagatgcaaatcgaacctcatagggaggtagtagctataggacgtatctttgaatcaggcaaattaatggctacaagtgggatattgtctgacgaggaaagcaagcttgactgcagagagcttatgatctccacttgtaaaatcactaaggtacattgggttgatttctttcatggtgtaaacaattaattgtatcagaatatgagtaatttaattcatcgcttcatatgcgtgtcattgaaaatttcatctattcatgtgctttttttttttttgccaggccggtattggaggaccactgattgattttgatgggaatttcgttggcataaacttctatggaacaaaagaaacacattatctaccacgattaatgatacagagactattgaaggattttgacgggtacgtttttcatattttttgtagttttttttggtatatgatcatatcagcaagtgttattcatctggattttattttttttaggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0613800, RefSeq:Os06g0613800