Os01g0206800

From RiceWiki
Revision as of 18:46, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0206800

Description

Protein kinase-like domain containing protein

Version

NM_001048881.1 GI:115435175 GeneID:4327094

Length

4381 bp

Definition

Oryza sativa Japonica Group Os01g0206800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5813807..5818187

Sequence Coding Region

5814067..5814324,5814441..5814626,5814827..5814984,5815062..5815194,5815279..5815469
,5815806..5816261,5816342..5816424,5816540..5816641,5816709..5816852
,5816974..5817045,5817348..5817480,5817578..5817713

Expression

GEO Profiles:Os01g0206800

Genome Context

<gbrowseImage1> name=NC_008394:5813807..5818187 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5813807..5818187 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgcgcggtgggggcctcgccgcgccaccgtcgggccccacctccgcgacgcgctgcgtcacctgctcttcgtcttcctcgtgctgctccaggcgcaggcggggcgcggcggcgccacgctcaacggcgaaggaatggcgttgctcgagctgagggagagggtggaggctgacccccatggcgccttgcgggattgggatccggcagacgccacgccctgcagatggtccggcgtgcattgctttgacggtaaagttgagattttgaacttaacaggccgagaattggtgggaactctcgcacctgagattggacgtcttcaacttttgaaatctctcattcttcgaaacaacaatttccgtgggaaaattcccaaagagttcggagggttaactgcccttgaagtactggatttgagcagcaacaacttggatggaacgattccagaagaattaatggcaatgccactgctcaagcagctgtcacttcatgacaatcagttccaagatgatatctcttctttgcacattcaagatatatctgatgagcaggcaggatgcttgagcagaaaattaggttgctgggcggggtttaaggattggacttctttcagtgatctccgagagaaatactccaccaacctagcaagtaaccgcacattcaaaagtctaggcgagccacacattatgcaaaatttgcagtcctttgcaagtgccgtgggccgcaggctgctcggtgaagttggcaatctgcctgccctttcagggaattatgctaaatcttctggccctgtaaattcagaagagatccaaagggctattgatgttctctctttagggagtggttcattctctgcattcccaaattcagaggccgaagttctggaatcagctgtaaatactgatgctgctgcaatgcagtctggagcagcaaatcaatcaaccgatgaagtgtctggttcaaagcacagcaagtgggcatattttatgataattccagctgcaatattgctgattagcctgattgtggctccaatcttggtctggcggaagcgagggcgtgcggcaataggaccttggaaaacgggtctaagtggcccacttcagaaagcatttgtaacaggtgttccaaagctaaacagacctgaactcgaagccgcttgtgaggatttcagtaacataatcaacactttccctagctgcaccgtgttcaaagggacattatctagcggagttgagatcagtgttgtttccactgccattttgtcgctcaaagagtggcctaagagttcagagacatgcttcagaaaacagatagacacactatcaagagtaaaccacaagaatttcatcaacctcctaggttattgcctggaaaatcaacccttcatgagaatgatggtgttcgagtatgctccaaatggcactctctctgagcatctccacctcaaagaatttgagcatctggactgggctgcaaggatgaggatcatcatgggtgtggcatactgtctccaatacatgcaccatgatctcaatccacctgttgcgataaccgacatgcgctccgacacaattttcatgacagatgattatgctgccaagattgctgatgttggtatctggaaagaagtcgccataaaagcaaagactgcaaaggaggatagcagcagccgttctgaatgtcctcctgatatcgcgagcaacgtctactgctttggcacgcttctgatagagatcatatccggaaagctccctgaagcagacgaccaaaaatccatgtgcaactgggccgctgagtatctgaagggcaagagctacagcaagctcgtcgacgcgtcgctgaaggaacacaacgccaacgagctggaggccgtctgcgaggtgattcaggagtgcattgatcccgactcagatcagaggccgacgatgagagacgccacccgcaagctgagacaagctctcaacatctcgccggaggcagcgacgccgcggctctcgcctctctggtgggctgagctcgagatactctctgcagaggcaacctag</cdnaseq>

Protein Sequence

<aaseq>MGARWGPRRATVGPHLRDALRHLLFVFLVLLQAQAGRGGATLNG EGMALLELRERVEADPHGALRDWDPADATPCRWSGVHCFDGKVEILNLTGRELVGTLA PEIGRLQLLKSLILRNNNFRGKIPKEFGGLTALEVLDLSSNNLDGTIPEELMAMPLLK QLSLHDNQFQDDISSLHIQDISDEQAGCLSRKLGCWAGFKDWTSFSDLREKYSTNLAS NRTFKSLGEPHIMQNLQSFASAVGRRLLGEVGNLPALSGNYAKSSGPVNSEEIQRAID VLSLGSGSFSAFPNSEAEVLESAVNTDAAAMQSGAANQSTDEVSGSKHSKWAYFMIIP AAILLISLIVAPILVWRKRGRAAIGPWKTGLSGPLQKAFVTGVPKLNRPELEAACEDF SNIINTFPSCTVFKGTLSSGVEISVVSTAILSLKEWPKSSETCFRKQIDTLSRVNHKN FINLLGYCLENQPFMRMMVFEYAPNGTLSEHLHLKEFEHLDWAARMRIIMGVAYCLQY MHHDLNPPVAITDMRSDTIFMTDDYAAKIADVGIWKEVAIKAKTAKEDSSSRSECPPD IASNVYCFGTLLIEIISGKLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKEHNANEL EAVCEVIQECIDPDSDQRPTMRDATRKLRQALNISPEAATPRLSPLWWAELEILSAEA T</aaseq>

Gene Sequence

<dnaseqindica>3864..4121#3562..3747#3204..3361#2994..3126#2719..2909#1927..2382#1764..1846#1547..1648#1336..1479#1143..1214#708..840#475..610#cgcgcgaaatcccccccaccacccccttcgcgccgccgccctcgtcgtcgtccgaccacccgatcccgacgagaacccgtccacgtccatctccgccgctgacagcaccagctcttcgccgacgccgccgctgagacaccgtcccggcgcgggcgaggcgacccatgggatcctccggcggatagctcggcctccctcggggctttgccgggctaagccagcgcccgcggcgtcgtgtcgtcgtcgtcgtcgtcgtcgtcgtcgtcctcttgtgatcttgttttcccggcgtcgtgacgaggccggagaggaagagatcgaccggagccagcgcctctgctcgccgcggttgtttcgctaagcttcgtctggttcttgattccctcccccacattctcggccggaagagggcggcggcagcggcgggtggccgccgggctgccattgtccgggaggcgctcctcccccgtcgccatgggtgcgcggtgggggcctcgccgcgccaccgtcgggccccacctccgcgacgcgctgcgtcacctgctcttcgtcttcctcgtgctgctccaggcgcaggcggggcgcggcggcgccacgctcaacggcgaaggtaacggccccagaggagcagcttgccatggtggtggtaggctggtagccgtgttgcttggtctgacctcccatggcgtcgtgcttcctgcgtgcaggaatggcgttgctcgagctgagggagagggtggaggctgacccccatggcgccttgcgggattgggatccggcagacgccacgccctgcagatggtccggcgtgcattgctttgacggtaaagttgagattttgtaagtctgtttttctctatgttttcccccgatacaatgtctcctgtgtaagccactaaattagttttttgttcctgaagatccaaattgaattgatgttcgatgcatttccatgtgaaaaacgtagttaaatgaactaatttcgatgataccaaaattggtggtttttatgcaggaaatggtttgttctttgtcattagcatgactgttcaaaaccgcatttcttactacgatgtttctttatcctggcatattgatgttcttaattgtgcatatgagttcttatctgtgtgaacatgtaggaacttaacaggccgagaattggtgggaactctcgcacctgagattggacgtcttcaacttttgaaatctctgtgagtgcttagaactgtatggatgatctgaacttagtttcttttcagctagttcaacggattatgctctgtggaatccacgggttgactgatattattcctactggttatgcttacccagcattcttcgaaacaacaatttccgtgggaaaattcccaaagagttcggagggttaactgcccttgaagtactggatttgagcagcaacaacttggatggaacgattccagaagaattaatggcaatgccactgctcaagcagctgtaagtctaattgggtgcttcactctctgctagttatttcgtataatgagcaattatcatctgtcaggtcacttcatgacaatcagttccaagatgatatctcttctttgcacattcaagatatatctgatgagcaggcaggatgcttgagcagaaaattaggttgctggtatgtgggctattttggtgtgttaccttttcagttgcttatagcctcctaatcatttccatttttttttaatttctaaaggttttatctcacctaacagatctttattttacagggcggggtttaaggattggacttctttcagtgatctccgagagaaatactccaccaacctagcaagtaaccgcacattcaaaagttgtataaataatcagcctttcttccttttgttatgcacagcattaaacattaattttacattgttttatgtctgtcaggtctaggcgagccacacattatgcaaaatttgcagtcctttgcaagtgccgtgggccgcaggctgctcggtgaagttggcaatctgcctgccctttcagggaattatgctaaatcttctggccctgtaaattcagaagagatccaaagggctattgatgttctctctttagggagtggttcattctctgcattcccaaattcagaggccgaagttctggaatcagctgtaaatactgatgctgctgcaatgcagtctggagcagcaaatcaatcaaccgatgaagtgtctggttcaaagcacagcaagtgggcatattttatgataattccagctgcaatattgctgattagcctgattgtggctccaatcttggtctggcggaagcgagggcgtgcggcaataggaccttggaaaacgggtctaagtggcccacttcagaaagcatttgtaacaggtaaacattcttattatcctatctgcttttatggtttgggaagtagatacattgcatgcagaaaaaacaggaactacctgccaagtacaaatctatcatctataacaaaattcgcatagttgcatagctattttgcattactcttatagcctgacaaattttcaaggacctgctcaccttttgtgaaccaattaatatttaagctgctcgatattcatatttggaactggcccatggtcagttcaggaagttatttggatttcttttttttattattatatttcagagtctctaggtaatgcagttaatcttctgtatgtaaattgttgcattcaggtgttccaaagctaaacagacctgaactcgaagccgcttgtgaggatttcagtaacataatcaacactttccctagctgcaccgtgttcaaagggacattatctagcggagttgagatcagtgttgtttccactgccattttgtcgctcaaagagtggcctaagagttcagagacatgcttcagaaaacaggtccatggcttcctacatgttctagttggagcagtaaatccttcaatgctagatcttcgctaatcccctgatttgcttgtgtagatagacacactatcaagagtaaaccacaagaatttcatcaacctcctaggttattgcctggaaaatcaacccttcatgagaatgatggtgttcgagtatgctccaaatggcactctctctgagcatctccaccgtaagttgttttattttttcatgacttcctcacacatatggaaactattctgctcattgaatgcgcttgttttgcagtcaaagaatttgagcatctggactgggctgcaaggatgaggatcatcatgggtgtggcatactgtctccaatacatgcaccatgatctcaatccacctgttgcgataaccgacatgcgctccgacacaattttcatgacagatgattatgctgccaaggtacagtttcaattagctgtagtgatctcggtaacatatgtagtgttgccactcatttgaagcagctgaattgcgcatctaatttgttgctcaataacatgtcatttggcattacgacacaaggttgaattgattaaaatggatgattagcatgacccttcccttgagctagtgtgatgctatgtactcttcttgtgcagattgctgatgttggtatctggaaagaagtcgccataaaagcaaagactgcaaaggaggatagcagcagccgttctgaatgtcctcctgatatcgcgagcaacgtctactgctttggcacgcttctgatagagatcatatccggaaagctccctgaagcagacgaccaaaaatccatgtgcaactgggtaaaatcatgcaaacccaaataaactccaagaaaaccccaactcttctcctctttaagaaggaagcttgatttctagcaaaacacaattccaaattgaatctccctttgccacaggccgctgagtatctgaagggcaagagctacagcaagctcgtcgacgcgtcgctgaaggaacacaacgccaacgagctggaggccgtctgcgaggtgattcaggagtgcattgatcccgactcagatcagaggccgacgatgagagacgccacccgcaagctgagacaagctctcaacatctcgccggaggcagcgacgccgcggctctcgcctctctggtgggctgagctcgagatactctctgcagaggcaacctagtagattgatcagtgatgtatactgttgctggtgaaccaatactcgcggcagcatccctcttcacaaggctaaaggaaaaagcctgtttatgtgcagaattcatgttcttgatcctatgaaaaaaaatgtcgtgtgacagatgtgcaactattgggtctaatgtgcattgatctttacacaagaatggaatgtgatttgtatgaatatttataagtttgatcagtgtaaaaatcaagcaagttcgctgctgttattccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0206800, RefSeq:Os01g0206800