Os01g0210500

From RiceWiki
Revision as of 18:46, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0210500

Description

Similar to SOUL-like protein

Version

NM_001048903.1 GI:115435219 GeneID:4325558

Length

1157 bp

Definition

Oryza sativa Japonica Group Os01g0210500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6006847..6008003

Sequence Coding Region

6007119..6007554,6007710..6007930

Expression

GEO Profiles:Os01g0210500

Genome Context

<gbrowseImage1> name=NC_008394:6006847..6008003 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6006847..6008003 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgccggagcggcctaatgctactactcctcgccgccgccgctgtcgcctccgcggccgtgccgccgtcgtgcgagcgcatcgagtgcccgtcgtacgaggtggtggacagcgccaacgggttcgagatccggcggtacagcgacgccatgtgggcttccaccgcccccatcgaggacatctccttcgtcgccgccacccgcaccggcttcctccagttgttcaactacatccaggggaagaacgcgtacaacgagacgatcgagatgacggcgccggtgctgacgcaggtggcgccgagcgacgggccgttctgcgtctcctccttcgtggtcagcttctacgtgccggcgaagaaccagccggacccgccgccggcggaggggctgcacgtgcagaggtgggccggggccaggtacgccgctgtgcgccgcttcggcggcttcgtggccgactccgacgtcggcgagcaggccgcgctgctcgacgccagcctgcaggggaccaggtgggccgccgccgtgtccgacgggcgcagggccgacccgacgtcgtcgtacacggtggcgcagtacaactcgccgttcgagttcagcggcagggtcaacgagatatggatgctcttcgacgcgaaggatgcatccgacatgtaa</cdnaseq>

Protein Sequence

<aaseq>MARRSGLMLLLLAAAAVASAAVPPSCERIECPSYEVVDSANGFE IRRYSDAMWASTAPIEDISFVAATRTGFLQLFNYIQGKNAYNETIEMTAPVLTQVAPS DGPFCVSSFVVSFYVPAKNQPDPPPAEGLHVQRWAGARYAAVRRFGGFVADSDVGEQA ALLDASLQGTRWAAAVSDGRRADPTSSYTVAQYNSPFEFSGRVNEIWMLFDAKDASDM </aaseq>

Gene Sequence

<dnaseqindica>450..885#74..294#aaccgcacgcacccgagccccactgcaatcccacctccccaactccgccgcacgcatccccgcacccgccaccatggctcgccggagcggcctaatgctactactcctcgccgccgccgctgtcgcctccgcggccgtgccgccgtcgtgcgagcgcatcgagtgcccgtcgtacgaggtggtggacagcgccaacgggttcgagatccggcggtacagcgacgccatgtgggcttccaccgcccccatcgaggacatctccttcgtcgccgccacccgcaccggcttcctccagtaagtcgtcagtactcatcacactccctcttctcgccatggaaaagcttcatcacaggctagtagtaccagtgaagctttcttttttctattgggctttacatgggccacaaaaatgtttgggcttgagataaccctgggctttgatgggccaggttgttcaactacatccaggggaagaacgcgtacaacgagacgatcgagatgacggcgccggtgctgacgcaggtggcgccgagcgacgggccgttctgcgtctcctccttcgtggtcagcttctacgtgccggcgaagaaccagccggacccgccgccggcggaggggctgcacgtgcagaggtgggccggggccaggtacgccgctgtgcgccgcttcggcggcttcgtggccgactccgacgtcggcgagcaggccgcgctgctcgacgccagcctgcaggggaccaggtgggccgccgccgtgtccgacgggcgcagggccgacccgacgtcgtcgtacacggtggcgcagtacaactcgccgttcgagttcagcggcagggtcaacgagatatggatgctcttcgacgcgaaggatgcatccgacatgtaacgcgatgagcgcgcggcaattccaaatcttcaaatgttcaccggagtagtagactcgatcgcacagctagtgtaatcttcaagctcctggtcggaagaataatggcatcttaaagccctaaactgctcgagtgaactgtttttttgcactgtaaagtatgtagttgagttgtgactcgtgcgtatcgagattaacaacaataaaagttctgtttagtcaactattttaacgcatgatttaacggggaacatcaatatatataccttttcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0210500, RefSeq:Os01g0210500