Os06g0617800

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0617800| Description = Ribose-phosphate pyrophosphokinase 2 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2). Splice isoform 1| Vers...")
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Gene Name

Os06g0617800

Description

Ribose-phosphate pyrophosphokinase 2 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2). Splice isoform 1

Version

NM_001064616.1 GI:115468963 GeneID:4341535

Length

3711 bp

Definition

Oryza sativa Japonica Group Os06g0617800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25666504..25670214

Sequence Coding Region

25667434..25667660,25667753..25667822,25668098..25668262,25668386..25668529,25669122..25669370
,25669661..25669876,25669961..25670053

Expression

GEO Profiles:Os06g0617800

Genome Context

<gbrowseImage1> name=NC_008399:25666504..25670214 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25666504..25670214 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaaggcggcggcgctctcctcctccccgttcgtctcctcccgccgcctctcctcccccgcggcgtctctccgcgcccgcacgccgaggtgcgtgatggggagcgagcaggtgagggtggtggtggaggaggaagggaagacgaagaagaggatgggggtggcggagccgaggagcgcgccccccgcggtgtggacgccgcgggcgcccgcgcaggaggcgaggctcgccgcgctgcgcaccgatgggcgggattccaggttgaagatcttctccggcacggccaatcgccccctcgcgcaggaaattgcttcttacttgggtgtagacctgggtaaggtcctcatcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgcgatgtgttcttggtgcagcccacctgctcccctgttaatgaaaaccttatggagctttttgtcatgatcgacgcatgtcggcgggcgtcggcgaggtctattactgttgtcattccatactttgggtatgccagagctgacagaaaggctcaaggacgtgaggccattactgccaaactttctgctaatttacttacagaagctgggagtgatcgtgtaattgtatgtgatattcattccactcaagcattgggatacttcgatattcctgtggatcatatacatggacagcctgtgattctggattaccttgccagtaagacaatatctaaggatcttgtggtggtttctcctgatgtgggtggtgttgtcagagcacgtgcatttgctaagaaattatctgatgcccctttagctatcgttgataagagaagacagggtcacaacatgtcagaggtcatgcacttaattggtgatgtgaagggtaaggtcgccatcatggttgatgatatgatagacacagcaggaacaattactagtgcagctgctttgttaaaacaggagggagcagaggctgtctatgcttgtagcacacatgctgtcttcaggtttggcagttggtttattgtaacatccatgatccatgtaatagtattgattcattggcttgttgcgaaggaaccatgttatggcatgattaggcagattggctttatgtttgatcaatataaaaatgacagggtagagcaataa</cdnaseq>

Protein Sequence

<aaseq>MAAKAAALSSSPFVSSRRLSSPAASLRARTPRCVMGSEQVRVVV EEEGKTKKRMGVAEPRSAPPAVWTPRAPAQEARLAALRTDGRDSRLKIFSGTANRPLA QEIASYLGVDLGKVLIKRFADGEIYVQLQESVRGCDVFLVQPTCSPVNENLMELFVMI DACRRASARSITVVIPYFGYARADRKAQGREAITAKLSANLLTEAGSDRVIVCDIHST QALGYFDIPVDHIHGQPVILDYLASKTISKDLVVVSPDVGGVVRARAFAKKLSDAPLA IVDKRRQGHNMSEVMHLIGDVKGKVAIMVDDMIDTAGTITSAAALLKQEGAEAVYACS THAVFRFGSWFIVTSMIHVIVLIHWLVAKEPCYGMIRQIGFMFDQYKNDRVEQ</aaseq>

Gene Sequence

<dnaseqindica>2555..2781#2393..2462#1953..2117#1686..1829#845..1093#339..554#162..254#acccatcgataaaagccgccccaaaacgggcaacacctcgacggcgccatcgccaccatcacccacctcctctcctccccttcccttccccgcgagctccaacgcccacaaaccctcaccctcccgcaaaaaccctaatcccacctcctcctcctccccccatggcggccaaggcggcggcgctctcctcctccccgttcgtctcctcccgccgcctctcctcccccgcggcgtctctccgcgcccgcacgccggtgagtgagcggggtgattcgatgtcgattggcgcgcgagggcgcggtttgtgatttttggtttttgtttttgtgtgtgcgtagaggtgcgtgatggggagcgagcaggtgagggtggtggtggaggaggaagggaagacgaagaagaggatgggggtggcggagccgaggagcgcgccccccgcggtgtggacgccgcgggcgcccgcgcaggaggcgaggctcgccgcgctgcgcaccgatgggcgggattccaggttgaagatcttctccggcacggccaatcgccccctcgcgcaggttgctttttgcccctgttactgttacatactcctagtaaaattcatgaaccagagtttttttttgtttcatctccaattttataagggagtacagctttgtacggtctcttgttttgtatgcgattggctgggataatttgataattgcataattgtatttgagtttggctcggctgcaccttttgtgctatggattggtatgtgtgttatccacgatggatatgaaggcgacctttttggaccttagttctgaaaattttgtttttgtttttttgtttcgttttgcaggaaattgcttcttacttgggtgtagacctgggtaaggtcctcatcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgcgatgtgttcttggtgcagcccacctgctcccctgttaatgaaaaccttatggagctttttgtcatgatcgacgcatgtcggcgggcgtcggcgaggtctattactgttgtcattccatactttgggtatgccagagctgacagaaaggtatgtataaactcttaattgatggctgttgcggtatgccaagtgtgtttgtactgatcatcatgcaatttcatttttactggatatcttcttcccttatcgtggtagctaatttgttactgtcccatttctagtggatgtaacccttttccttgtctaagatttttgctattgtggtgtacttaaatttattacacactgacactgctggtactaaagggggtcaaaattaacgttcagatgatactacagaagccattaagcacgcagattggtggtgatagtgtttattatgctttttacaaatcctgacaagaaaagcataattacagaaatcagaatatgaccatatcttctacctgtttacttgctacaagcaccttttctctgccattttctgttatctctgcttcagcaatgtgctcgctggaccccttatggattttcccttccaaacattagcaattccttttgctttattatgttggctgaatctgttgaacactatttgcaatgtttcatgaccactgtttctccctcatgtgaatgcacttttgttttcatgaactaagttgattcttttgtagtgtaggctcaaggacgtgaggccattactgccaaactttctgctaatttacttacagaagctgggagtgatcgtgtaattgtatgtgatattcattccactcaagcattgggatacttcgatattcctgtggatcatatacatggacaggtactcttaacagaccaagatatgttccttttattacctaaatgctgttttcagttgtacgcaattttcttagctggatctgagttggcagcaaagtaacgattgaatctttgttatatgtagcctgtgattctggattaccttgccagtaagacaatatctaaggatcttgtggtggtttctcctgatgtgggtggtgttgtcagagcacgtgcatttgctaagaaattatctgatgcccctttagctatcgttgataagagaagacagggtcacaacatgtcagaggttggaacaagtttccttgaatttgatctactccaattttgaagttacacctacacatttcatctctgctgcataggctgaaagtaggataaaaagcaacttttctgattacccgacaattaattaatacagttagatgctttactgaacccagccatcctcttattgattttgccatgatttttgggcaactacttgcaattcatggttcacaacttagatgtatgaggctgctaaatagtaatctggaatttcctattgctggccatctgcaggtcatgcacttaattggtgatgtgaagggtaaggtcgccatcatggttgatgatatgatagacacagcaggttagcatcttttcataatggtaagattctgcatattttgtagtgcgctcgttcaattattaatctcatttttttcttttaatacatcccaggaacaattactagtgcagctgctttgttaaaacaggagggagcagaggctgtctatgcttgtagcacacatgctgtcttcaggtttggcagttggtttattgtaacatccatgatccatgtaatagtattgattcattggcttgttgcgaaggaaccatgttatggcatgattaggcagattggctttatgtttgatcaatataaaaatgacagggtagagcaataattttactagattccacttgagcacaccaatcacttagtgctagtaagtgggagtctggaaaagaggttggctttaatctagttgagtgcggatctggttcttgttgactctatttcattagtagtcatgaatctgtgccacacatatcagcatatgtttttctggctattttgatttaggaagggacctcaagtcctcaattgaagtcttgaattttattagcatcaacatgcatgatgtctttttacatggtaccgcacagtaatttgacttcaaaataatagcaggatgtgttgccacttacttcatttgcaaaaattgttgtccttttgtattcctgcactattttgtaggcataaaagtaagtcgtttaccacacctactttttcccactagcactgtctttgcagccctcctgcgattgaaaggctctctggaggcatctttgaggaagttattgtgacaaactccattctgctgccagagcacaaatgcttcccccagttgacagtgctctcaatggcgaaccttgtggcagaaacaatctggcatgttcatcgcgatggctctgtgagcagcatatttcaatagcggcggatgctatggctaccgcgatgccacatttgtgtggtgtggagaaggcacctgatggttgtgcccatctgcgtaggaatcaattttggtgacaagactaaataaggttgtagtgccgtgtaggcatcacacatgtatcgtgtgatcaattttgttcttgcacccactaaatagtgttttcctgttaactcgacgcaggatatccattgtatcaagtataagagaatcagtctcgtgcagttctttcatcctttagcaactgttgagggacaaggaaaagatttgtgctgttcactgatatattggaagtaatgcaaatgatgcttagctctgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0617800, RefSeq:Os06g0617800