Os06g0618100

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0618100| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001064618.1 GI:115468967 GeneID:4341537| Length = 313...")
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Gene Name

Os06g0618100

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001064618.1 GI:115468967 GeneID:4341537

Length

3134 bp

Definition

Oryza sativa Japonica Group Os06g0618100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25685830..25688963

Sequence Coding Region

25686141..25686920

Expression

GEO Profiles:Os06g0618100

Genome Context

<gbrowseImage1> name=NC_008399:25685830..25688963 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25685830..25688963 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgttttctttgtgcagtacttctggctgtccttttggttcaagttgtcattttctccataacttccctggtggctaccaggctgctgcaaagatgaccagccatggtgggacagctgttgcagctcctcctggaagaatgcctttaggacctggtgctcctaatgggccacctacatccagcgtgaaaactcgcatgtgtaacaagtacaacactgcagaaggatgtaaatggggtagcaagtgtcattttgctcatggagagagggagcttggaaagccgatgctgctggacaactcaatgccacatccaatgggatcaatgccgtttgaggctccaccaatgcctggcccggacatcgttcctccctcaacctttggtgcctcagccacagcaaagatcagtgttgatgcatccctggctggcggtatcattgggaagggtggaaccaacacaaagcatatatcccggatgactggggccaagctagccatccgggataacgagtccaaccccaacctcaagaatatcgagcttgagggtacatttgaccagatcaaacatgctagtgctatggtcacggagctaatcgtccgcatcagtggtaatgcccctccagccaagaacccgggcagggggtcgcatgctggggggcctggaagcaacttcaagaccaagctgtgtgagaacttcaacaaaggctcctgcacgtttggagacaggtgtcatttcgcccatggtgaaagtgagctgcgcaagccgccggctgctgcttga</cdnaseq>

Protein Sequence

<aaseq>MMFSLCSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAP PGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSM PHPMGSMPFEAPPMPGPDIVPPSTFGASATAKISVDASLAGGIIGKGGTNTKHISRMT GAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAKNPGRGSHAG GPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRKPPAAA</aaseq>

Gene Sequence

<dnaseqindica>2044..2823#ggttcgctcgtcgcctcgcgtctcgtctcctgttcggctcgactccacccgccgcgagagagagagagagagggagggagcaaaccctatctagggttttgcccgcccaccgccctcgccgtcgacgccatggaagccggaggaggcaagcgggccgccccggagggcaccaacggcgccgccaagcgcgcgagaggtgagcctcttcgtggtttccttcttcttcttgttttttttcccttttcttggttgctggctcttccattggaaggatggctggttcctagggtttctccagccggctaccttgttggggggctcggattctcggcggcgctccggcttggttttgagctgggtggtgattggtgaagacgggagacgaagatttggggggtgttgggattggggagcttgtggccgccttaagcctttcatgtttttttttcttgttttgttcgtttggagatgatgacggaaggctcgccactatttttttaaaatttatttttggcaatatttcgcaaagagatctagaaacgcgattggtgacctagtggacctgctaaatatgtgaacggatctagctgctcgtcgaattttcttgagtgagttgaaagagatgtccgatttctcaaggcgttaatttgaaagtgaaactcattaagctctggatactggacattattgtattgtaccatttaccttttttttttctttctgagaaggtaatgctcagtggattttgaaatgattaatgtgtacatgttgtttatatacatgccatgttttagtaaaaatcaacgctattaaccggcggaaataataaatttggtgtaacagcatcggagtcgtctcaagtgggtgtaggaagcaaattgaagccatgcaccaaatttttcaggttctaatctaacttaaaatgaactatcacctgtttacacatgctattctgcactttgctgtggttttgccttaaataattataatttgttattttgctaagaaattgttgttgaggggtaacaaatgggttaagtaagatttttctacaggtttccattgtgtataatggataacatagcagctatatgtaaaactccatttctgatgaacaatcaaatctatctgttacactgtggtaccatatcacctgcagcaatcaagataatagtattaaacgttccatatgggattgcaattgacttgccattatggaattatactacttactaaatgataacattcagtgtagcagcttattttcagtacacgcacagtgtgtttaccttgaatttgaacttggagagatgtttttctttttatattctactattgattgatcatgtgttttagttatcacatcgatataagctactccttctgctacactcctgagttgcaaaagatgttcttattatatacaattgtgaatgaatcatgcagtaaagtgataatgtgttgtcatgttcatataagtaaagtagctataagacaatagggaaataacttctttgacaaactaaaattctattattttttttaaaaaaaatggtgacacactgataggcaaattattctgtgttgctgtatgcctttattaatatgtatgctatatttactgtttaccacagtatatgtttgcttctgtattaatatgttcagtttcatgtgatgctacgagtgcttcttaataattagatagtattcaccatcaagctttgaccactggtaaatctagattgatcccattgaaaataactttgtagatttacttaacctgtgaaaataattttacagataagatatccacataatgattatagatgtgttttgtacgtcaattattaatgtttaatgtcatttatatgaatcaaaagagagaggtggtttcatctattttgtgttgtttactcgtatctgttagcagtgacctaataaggttccatcttcagctaaatataacattacttgtttcatccatattgggtcactgtaattttcctttcgtacacatttggtcgctgtaattttattccttaaatgatgttttctttgtgcagtacttctggctgtccttttggttcaagttgtcattttctccataacttccctggtggctaccaggctgctgcaaagatgaccagccatggtgggacagctgttgcagctcctcctggaagaatgcctttaggacctggtgctcctaatgggccacctacatccagcgtgaaaactcgcatgtgtaacaagtacaacactgcagaaggatgtaaatggggtagcaagtgtcattttgctcatggagagagggagcttggaaagccgatgctgctggacaactcaatgccacatccaatgggatcaatgccgtttgaggctccaccaatgcctggcccggacatcgttcctccctcaacctttggtgcctcagccacagcaaagatcagtgttgatgcatccctggctggcggtatcattgggaagggtggaaccaacacaaagcatatatcccggatgactggggccaagctagccatccgggataacgagtccaaccccaacctcaagaatatcgagcttgagggtacatttgaccagatcaaacatgctagtgctatggtcacggagctaatcgtccgcatcagtggtaatgcccctccagccaagaacccgggcagggggtcgcatgctggggggcctggaagcaacttcaagaccaagctgtgtgagaacttcaacaaaggctcctgcacgtttggagacaggtgtcatttcgcccatggtgaaagtgagctgcgcaagccgccggctgctgcttgagacatgcgtgtcgtggcttggactagacggccagcatacctgagctccaaatatgaaaacgattgcacacaaggtgaaaatgatatgtgcattgttgctgcttctgcagcatgagatattttgtcatgggaggaaactggatgtaatctgggaggaaatagataacagggaatttcggtgtctttgatttgtagaattaccttggagtttttccctcggcgcttcagtcaaattttgtaatgcttcgaatgcactatataacctagcaaaactacaatgattccatttacttgggtgctttctgatgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0618100, RefSeq:Os06g0618100