Os01g0231900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0231900 |
|---|---|
| Description |
Predicted eukaryotic LigT family protein |
| Version |
NM_001049034.1 GI:115435481 GeneID:4325894 |
| Length |
6236 bp |
| Definition |
Oryza sativa Japonica Group Os01g0231900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:7286954..7293189 |
| Sequence Coding Region |
7286988..7287013,7287175..7287232,7287842..7287983,7288195..7288406,7288524..7288561 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:7286954..7293189 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:7286954..7293189 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttggcttgcgcttccctcgcaaggtttagtcggctcgctcgccctctatgcgccgcgggttccgcgccgcgcttcctccagggatctgttaatcaaaatagtattcactcacttgtaatgaaaggtgcacaaggagcctcaaataattcggcaaaacacaagaaaagaaagtctgctgtgcagagatggaggccaatctccacagaagccgctgctccaaaagctgaccttaatgagatgtcaggtcctgtaagcaaacaagtggaagagaattcagcctcagatggaacaactaatgttgttattgaagtttccacctacaacgcatccttgccagaaaataaattagccacagaagatactatggaggatgctagcttcaataaggacatagataggtccaatctatctgaaaagtgttcctcttctgttcaggtagatgctcctctgatgcgctttgtgaaaggaaaaggtggaaccatgcagaagcagattgaagatgaaactggggtcaaaattatatttccatcttctaaggaggaaacatgtgttgttcttgaagctaaaactactgaagatattagaaaggcttcagagaaaattgcaaaggttcttgaagaggccgtgaaaagtccaatactagattactctcacttcatttcgcttccattggctatccacccaagccttgttgagaagctgaaccacttccagtgctcaatccttgggacttcttctaatgtagatagtgataagggtgaggacctaagtgaaggttctatggatgaaattgaccatgaacagaagcaagaaaggagccctagtgtttcaataaagatgcaagcccatgaggagtctgtcagagttaaaatggatattaagggctcccaaccagacttcggcattgacaagtcaatatttattaaacccaaaacctttcacctaacggttcttatgttgaagctatggaataaggatcgcattgctaaggcttctgatgtgctccagtcagtatcgtcccaagtaatggaagccttggaaaaccgaccaatctccatacaacttagaggtctgacatgcatgaaaggctcaccagctagggccagggtagtatatgctcctgtgctggaagttggtgaagagggacgcctacaacgtgcttgcaaagttataactgatgcctttgtcaagtcgggcctagtacttgaaagggatgcgaggcaagaattgaagttgcacgtgaccataatgaatgtgaggcacaggaagagcaagagatggaaccaaagaaacgactcattcgatgctcggaatattttcagaaaatatggggaacatgactggggcgaatacctcattcccgagatccatctttcgcagcgattcaagttcgatgaaagagggtactactactgctgctcttcaatccccttgcctgcggcggagatgcaaacggagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MLACASLARFSRLARPLCAAGSAPRFLQGSVNQNSIHSLVMKGA QGASNNSAKHKKRKSAVQRWRPISTEAAAPKADLNEMSGPVSKQVEENSASDGTTNVV IEVSTYNASLPENKLATEDTMEDASFNKDIDRSNLSEKCSSSVQVDAPLMRFVKGKGG TMQKQIEDETGVKIIFPSSKEETCVVLEAKTTEDIRKASEKIAKVLEEAVKSPILDYS HFISLPLAIHPSLVEKLNHFQCSILGTSSNVDSDKGEDLSEGSMDEIDHEQKQERSPS VSIKMQAHEESVRVKMDIKGSQPDFGIDKSIFIKPKTFHLTVLMLKLWNKDRIAKASD VLQSVSSQVMEALENRPISIQLRGLTCMKGSPARARVVYAPVLEVGEEGRLQRACKVI TDAFVKSGLVLERDARQELKLHVTIMNVRHRKSKRWNQRNDSFDARNIFRKYGEHDWG EYLIPEIHLSQRFKFDERGYYYCCSSIPLPAAEMQTE</aaseq> |
| Gene Sequence |
<dnaseqindica>35..60#222..279#889..1030#1242..1453#1571..1608#1726..1805#1901..1968#3356..3629#4164..4276#4357..4422#4640..4730#5197..5264#5612..5649#5726..5915#gccgtctctgagccgcgcggcctccacaccacccatgttggcttgcgcttccctcgcaaggttcgttatccctctccccgcaacaacctcgatcgaaggaagccagtagaaattccaatcttttcctcgatcgaagcgcccggatcgtcgggggggttgcagctcctctgtctctctctcttaccaatggagtaatttatttctcctgtcgtctttgctaggtttagtcggctcgctcgccctctatgcgccgcgggttccgcgccgcgcttcctccaggtccgattcctctgcctccccacggtgttctcccccacaagaagcttccggttgttttatttttgttttgttttgtttcgtacatacattattgatacggatggataaatatctgagctagggttttaggaaccgatagaatttgtttagtctaattgaaccgcagtgtgtcaattgggagctagtaatggggatctttttttgggggattttgttgagaaaagtttatgccttgaggggcttatgctatcaattgattgaatcaagtatggttttgaacagctatgcaattgccatgtctctcttgagaaattccgtagctaatactttgtgttctaccctctgtatcgtgttcatctgctgcggtatgctgtggcggtccatgtttaacttaatgagttgtgtgtagcacttggcctggccttgagatcgaatgccaaccttgcaggcctgaaaattgtctaactctgcacggtaccaaaattttcagcaccttgttatctgcttctactagttcttttaatgcgtttgccttcatcagagcttctgtgatacatcacctcaatagtcaatatggtgttttacatgatagtactttgaccgtgacagggatctgttaatcaaaatagtattcactcacttgtaatgaaaggtgcacaaggagcctcaaataattcggcaaaacacaagaaaagaaagtctgctgtgcagagatggaggccaatctccacagaagccgctgctccaaaaggtaagccccatttgctacttgctactgctaataccttgactcaagatcatagtgcattcaaacctggatatgccctagtcatgattggacgctgctaatctatgatgctgtaaagataatatccatctatctctaaatttcctttccttaacttgtttgtgtatagcattgggtggcacttctgaatcatcctatattccacatgatgcagctgaccttaatgagatgtcaggtcctgtaagcaaacaagtggaagagaattcagcctcagatggaacaactaatgttgttattgaagtttccacctacaacgcatccttgccagaaaataaattagccacagaagatactatggaggatgctagcttcaataaggacatagataggtccaatctatctgaaaagtgttcctcttctgttcaggtatgctcggtggatatgtatgacaattaatgtatcttttccctgtaaaaagctcaatgtatgagtgatatttacttgtattcttttcaaatattcatgaattctgttcttttctaggtagatgctcctctgatgcgctttgtgaaaggaaaagggtattggtctcttgaacctgtttcagatatgcattatcctcaactatcctcagttgaggataatgctggcctgtctctctctgtgactgagaatcaatcgtattctttggcatgcagtggaaccatgcagaagcagattgaagatgaaactggggtcaaaattatatttccatcttctaaggaggaaacatgtgttggtaaagatatactgtttatttttcaaatatgcttgatgaaataagctgttggtaactttggaagctaatgtttgtgctatattgattattttcagttcttgaagctaaaactactgaagatattagaaaggcttcagagaaaattgcaaaggttcttgaagaggtacacgtgatgcactttttttaagataaaggaagctttattgatcttaaacaattacatcaagacaatacaattactctaagaccagtcccagcctctgcatgattaagatgcacacgacttacgattattacaaaagaaaagcggcacaacaacaaatatcatgccgcagcgaactacaaacacaagcgatcttcatacttgcacgcatgtggtgcactgctgcaatggcttattatttcctgatactctgtgcatgtatctatattaggcgtgggcagtaaaatcccgaagactgaaagccgaaccgacccgagccgaaccgaaccgaagtgtcgggtttttcaggcttcggtttatccttcggtttttattctgcatttgttcggtgtatggttttttctgcggtttccaatcctcacgaaccaaacaacccgagaaaaccgaaaccacacgttcacatcatatcccagcaacccagcctggtaacatgaaaggcccaacatctcctaaacaaggcacagagcccattagtttaacactactcgtatcttctcaagcggtcaagcctattcatcgacatctcgacatcgatctttgcacgcgcatggctggattggatggctaccttaacgatgctgccgctgccactgcatgcgtggacgattgcctcgggcagctgcatagctgccacatgcacacatcactcatagctggcagtttgctcagattgcaagttttatgactcctaccatgtgcgagggcagaaagcaacttctcccctctcgatttttatgaaccatctagcgattcatttgattatcgtgtgcttcggaattcatggaagatgttctcccggtttgttcggtgaaaccgaacaaccaaaccaaacaaactcggtttgttcggctcggttttttaccttttcaatagatacttcggttagcatatctgcaaaaccgaacttctaacaaaccgaataaaccgaggaaaccaaacgcccacccctaatctatattactatagcataatagtttgtggtgcttattacactaacattcttattcatttcctcctgatcatttaatgaaatatacaagctatgatagttatgagtgtcaaagtttaaaggccttactatgttaacaataatatatcaaagcacaaaaattgatgcaggatacctcttatatttcttgcagtagcactagactagtccaagttaaagttgtcaaaaggtgtaaagttgtgtctcccatcaccagtgagctactcacaaatataatctactgccacctgatttgataaagtcatgtttgaaatcctatttatgtcagctaatcatggttatcaccctggacggctgagctcctcctttttatttcaggccgtgaaaagtccaatactagattactctcacttcatttcgcttccattggctatccacccaagccttgttgagaagctgaaccacttccagtgctcaatccttgggacttcttctaatgtagatagtgataagggtgaggacctaagtgaaggttctatggatgaaattgaccatgaacagaagcaagaaaggagccctagtgtttcaataaagatgcaagcccatgaggagtctgtcagagttaaaatggatattaagggctcccaaccaggtctaaaagctttgctgattttcctgctatttcgttttatcggagttttcctattgtcaactctataaagtccggtttttggaactttctatagtacaagtcaattacacaactaagagggctggtgtgtttgtgaagagttagatgtgcagctctaatttttaatctgtcaagttgggaagttttgtattttaagttttatttcttatttttaacattccacactgttgattttggtggtgagattcaaacgattgtgagtaatattgcagatgtaacattttctagtatctctatgtttaacaatgtaataaataataaggcaagctaatgaatatttgaagtttggaatttaagaaaaaaaaaagttctcttgtttgccaagcaaatctcatatctgtattttgttttgtaaattttgtttgtacacctgtggcatattgacggtactagatgcattgcttgttatgcaatttccaaattacaagttctatgctcttcaggcattgaactaagctttcttatcatttgtagacttcggcattgacaagtcaatatttattaaacccaaaacctttcacctaacggttcttatgttgaagctatggaataaggatcgcattgctaaggcttctgatgtgctccaggtaatttccgtttccagattattgtggtttattgtctgagatgacagtgagcaacttaatgtgttaccttgtggatacagtcagtatcgtcccaagtaatggaagccttggaaaaccgaccaatctccatacaacttagaggtctggtgagttgccattctcgaatagttctggctggaagctcattcatgcatacatctagaatagcaaatgtagataattcgagccagagaacaaaatatttgttcctaaacacattgttgctgcaaaccacattttaatacctgtttataaaaggtatctgtactgtttctcccaccttttccaataattcaaagttccaatgagaatatttcattccagacatgcatgaaaggctcaccagctagggccagggtagtatatgctcctgtgctggaagttggtgaagagggacgcctacaacgtgcttgcagtatcctttgaaattctgatgattgatgagaaatcagtctatttaatatggatctttagaatttcctaagaagcaatctgtgcttatagatgtaacttgttagtatctgttaataaacattcttggtgacataccaagtgaagacctgtgtttgtgtacctcttgcagtcacatgtgcactgtttaagattcctttattgatggagtgttttttttttttttttttggggggtgggggggtggggtttaggtagtaggaagccctcataaatcatgtattcaacgtttgaggagggtactgtaaaaaatagtcgtggtattactatattaggttttcatgactgtaatgtatccatcacttaacatactgcccacatgacaagtttgcataattgcacttacattagatgagttccaatcttctttatgcaaaatggttctccttcacttcctttcactttatcagaagttataactgatgcctttgtcaagtcgggcctagtacttgaaagggatgcgaggcaagaattgaaggttagtaaatatatatcaaagcactgttcttgttagcttcattgacatcggcatgtagttctttgaagctaattgttgctatgaaatcattggcagcagcgttgttcactaaaagcatattgaaatggcagtagcatctgcttgttgataactgtagtccagtttgatttcaatgatgagtctgaaatgcacattttatttcttatttctagaaaaacttcatgattaacttcagcacttccattactattctggactatttttacaattgtttgagggaaatgttatgcattgctctgaaacagcaatatttgatgctaaaattgctgttttcttttcaacttcagttgcacgtgaccataatgaatgtgaggcacaggaagaggtgattctctcttcatcttgataattcatggtctatgtactgccggcttaacttgactaccttgttctcgctgcagcaagagatggaaccaaagaaacgactcattcgatgctcggaatattttcagaaaatatggggaacatgactggggcgaatacctcattcccgagatccatctttcgcagcgattcaagttcgatgaaagagggtactactactgctgctcttcaatccccttgcctgcggcggagatgcaaacggagtgagtttcataataaacacattttcagtgttttcaaatctttcaccagtatcatcatcccattaggacgacttcgcgggttactgttgctgaaccaataatgtgccatgtgttgtgcttgttttgttctggagtgtggcatgctcagtctactcggttgatataggcctttcttttgatagtgggatagccggataggcaattatgcatcatgctgtggacctatggtgttgtcaatggcagtgggctccttggagtggttgatgtaagtttctggtctggcccgtgtacaatcacgcctgcaattttctctgtcgttgccctg</dnaseqindica> 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