Os06g0619000

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0619000| Description = Disease resistance protein family protein| Version = NM_001064622.1 GI:115468975 GeneID:4341541| Length = 4275 bp| ...")
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Gene Name

Os06g0619000

Description

Disease resistance protein family protein

Version

NM_001064622.1 GI:115468975 GeneID:4341541

Length

4275 bp

Definition

Oryza sativa Japonica Group Os06g0619000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25743900..25748174

Sequence Coding Region

25743969..25747436,25747765..25747812

Expression

GEO Profiles:Os06g0619000

Genome Context

<gbrowseImage1> name=NC_008399:25743900..25748174 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25743900..25748174 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcactgaattaactgttacaggatggttcttgtcacctattatacgggaaatgcaagatactgcactgtcctacataagggggcaattcagttgggagaaggatcaagaaaaggaccttgagcgtcttgatactatccttacagagatcttggccatcgtggacgccatcgagaagcgggagatcaaggatgggaatcagaggaagctgctccggaagctcaaggatgccatttacagcgccgttgatgtgcttgacagcttccagtacatggccctcaagtctaaagtcgacagccaagctatggtgagtcgcgttacctcatcctgtgtttacttgggtaagcgcgtagtaggtactgataagttccggaggaagctaaccgatatgttgaaaaaattggatgaggttaaaacaactgcggataccttgttcaaattggttagttttgatagtgctactgcaaagctgctcccagtcacacaggcacgtgtaacgtctcctttgaaggaagagaaccacatatatggtagaaaagatgatcttgataggctgagagatttgttgcttatgcaaagtgatagtagtgcacctggacctagtaactcatgtgttcctgttatatccatcattggtgttggtgggattgggaagacaagcctagcacaattagctttcagagatgaaaggatacgtgcgagctttggtctcaggatctgggtttgtgtatccgatatttatgatgagataacattggcaagggatattttagaatctgtaacaggtgaaaattatcgcagtgttactaaattggatgaattgaagaatgttcttcaagaaaagataagtcaaaagaacttttttcttgtattggatgatgtatggtatgatgagaacaggacaaattgggagaatgaattagtatgggacggagttttatcaacattggatactggactgggaggatccaaaattctggtgacgactcgaaccaacaaagccagtgaactcctacgtgctggagcctgtttacaattagggggattgaatagagatgattactggatgttattcaaaagctgtgcctttggtgagaaacatccaggactgtttcaagaacttaaggaaataggaatgcagattgctgaaagattgaatggtttgcccttagcagcaaaggtaatcggtcgcctattgaatgttgatttagattcaagtcattggaagaaagtgctagagagtgacatatcaggtgatgttatgaaggttctcaggttgagttaccaacacttgcccatccacttgcaactatgcttcagcttctgcagcttattcccgaagaactggcgttttgatcccaggaggcttacagacatgtggatttcacagggttttgttcagaaggaggatgagtctgacaatgacatgaatgttgaagatgttgcgaagggctactttaatgatcttgtacaaagatcattcttcgagagatctttgttagaccttccaatagagtatgtcatgcatgacttgatcaatgaccttgccaggaatgtttcaaaggacgagtataccagaattgagagtgagaagcaaaaggagatcccaccaaacattcgccatttatctatatctgcacatttgtgggccggtatgaagaaaacagagatgaaaaacctgcgcacgttacttgtttggagcaaatcatggccttgctggaaattgtcccttccaaatgatgtgttcaagaaatccaaatacatccgagtgctagatttgactggttgttgcctggagaggttgccaacatcagtgaaaaatttgaagcatttgcgctatcttgcttttagggttcctgaaaaaccattgcccacagcattggtccaactttatcacctagaggttctagtcacaagaggtcactcttgtcggggaagtgaatgtttccaacttccaacaaacatgaagaagaacctactcaaattgagaaaagcttaccttttcaatgtagggggtgccacaatatctggttttggtggacaaactcttctgcatggcccaggggaattccatgtcaagaaggagagtgggcacagacttggagagttaaaggagatgaacaatatccgaggaagattaagtgttaggtttcttgagaacgtggaacatcagcaacaggctgttgatgcgcacctagattgtaaagagcacgtcaaacacttgcagctagagtggagtgaccttccaaggcctattacttctgagttggattctgatgtgcttgaggcccttcgacctcaccctgatcttgaccggctgaatatcacaggttacaagggactgaggtcacctacttggtttgagaccaattggatgaaagcactgacttctgtaatccttgagaattgcatgggttgggtgcaattgcctcctcttggacagcttcctctactggaggatcttgtactgaggaacatgcatgctgttgggcagataggtgaagaattctatgggaacggtgaaatgaagggctttccaaagttggaagaaatagtatttgatggcatgcccaactgggagaaatggtctggaattgaagatggttcattgcttccatgtctcacaagactttacatagctaagtgccctaagcttcaagaagcaccacccttaaatgcaagaccaaaagttgaagtggcgataacatctgattccttaccaagttcgtgtctatttgactccctaatggcatcggcatcgtatctgatcttacttgtcaactgctgcagcttcttgagcagcctgaatactgaccaacttagtcatgttgaggagttgaacgtgaagagctgcacagatccaatgccagcttgtggatttatcggacttagctcccttaaggtgcttagaatcagcaactgttcagcgttactatcgtcagtttgtgtggaagcaggtgaagaacttgacacatgttttttccctcagtcactaagtgaacttgaaatagttgatagcaatattcagtccagtttgctaccaagatacttgcaaggcctaactaacctctcggtgctggtgattaatagctgtgattctatggatttgctatctcttgcttatggaacccatcaccttacttctctagaagccataatcattaaagactgtattttcctatcctcattggatggatttgaaaatctgattgctctcagaaagttagtggtagcagattgtaaaaatttctgtttcttgccagctgatctgaatgcattaatatctctcaaaacattagccatttatgggtgccctaagatgaaatttctcccccagaatggcgtaccagcttctctacagttaattttgctgtcactgttgcatccagagttagacagacagcttcaaaggagggaaggtactgaatgggacaagattgctcatgttcctgaaaagaaactagaggtagagctaattgatttgttgacactgtttccatccagttctttctga</cdnaseq>

Protein Sequence

<aaseq>MGTELTVTGWFLSPIIREMQDTALSYIRGQFSWEKDQEKDLERL DTILTEILAIVDAIEKREIKDGNQRKLLRKLKDAIYSAVDVLDSFQYMALKSKVDSQA MVSRVTSSCVYLGKRVVGTDKFRRKLTDMLKKLDEVKTTADTLFKLVSFDSATAKLLP VTQARVTSPLKEENHIYGRKDDLDRLRDLLLMQSDSSAPGPSNSCVPVISIIGVGGIG KTSLAQLAFRDERIRASFGLRIWVCVSDIYDEITLARDILESVTGENYRSVTKLDELK NVLQEKISQKNFFLVLDDVWYDENRTNWENELVWDGVLSTLDTGLGGSKILVTTRTNK ASELLRAGACLQLGGLNRDDYWMLFKSCAFGEKHPGLFQELKEIGMQIAERLNGLPLA AKVIGRLLNVDLDSSHWKKVLESDISGDVMKVLRLSYQHLPIHLQLCFSFCSLFPKNW RFDPRRLTDMWISQGFVQKEDESDNDMNVEDVAKGYFNDLVQRSFFERSLLDLPIEYV MHDLINDLARNVSKDEYTRIESEKQKEIPPNIRHLSISAHLWAGMKKTEMKNLRTLLV WSKSWPCWKLSLPNDVFKKSKYIRVLDLTGCCLERLPTSVKNLKHLRYLAFRVPEKPL PTALVQLYHLEVLVTRGHSCRGSECFQLPTNMKKNLLKLRKAYLFNVGGATISGFGGQ TLLHGPGEFHVKKESGHRLGELKEMNNIRGRLSVRFLENVEHQQQAVDAHLDCKEHVK HLQLEWSDLPRPITSELDSDVLEALRPHPDLDRLNITGYKGLRSPTWFETNWMKALTS VILENCMGWVQLPPLGQLPLLEDLVLRNMHAVGQIGEEFYGNGEMKGFPKLEEIVFDG MPNWEKWSGIEDGSLLPCLTRLYIAKCPKLQEAPPLNARPKVEVAITSDSLPSSCLFD SLMASASYLILLVNCCSFLSSLNTDQLSHVEELNVKSCTDPMPACGFIGLSSLKVLRI SNCSALLSSVCVEAGEELDTCFFPQSLSELEIVDSNIQSSLLPRYLQGLTNLSVLVIN SCDSMDLLSLAYGTHHLTSLEAIIIKDCIFLSSLDGFENLIALRKLVVADCKNFCFLP ADLNALISLKTLAIYGCPKMKFLPQNGVPASLQLILLSLLHPELDRQLQRREGTEWDK IAHVPEKKLEVELIDLLTLFPSSSF</aaseq>

Gene Sequence

<dnaseqindica>70..3537#3866..3913#aattcttcttgattcttctttgtatttggatttcttgctatcagcaggaactctctctctctctccaaaatgggcactgaattaactgttacaggatggttcttgtcacctattatacgggaaatgcaagatactgcactgtcctacataagggggcaattcagttgggagaaggatcaagaaaaggaccttgagcgtcttgatactatccttacagagatcttggccatcgtggacgccatcgagaagcgggagatcaaggatgggaatcagaggaagctgctccggaagctcaaggatgccatttacagcgccgttgatgtgcttgacagcttccagtacatggccctcaagtctaaagtcgacagccaagctatggtgagtcgcgttacctcatcctgtgtttacttgggtaagcgcgtagtaggtactgataagttccggaggaagctaaccgatatgttgaaaaaattggatgaggttaaaacaactgcggataccttgttcaaattggttagttttgatagtgctactgcaaagctgctcccagtcacacaggcacgtgtaacgtctcctttgaaggaagagaaccacatatatggtagaaaagatgatcttgataggctgagagatttgttgcttatgcaaagtgatagtagtgcacctggacctagtaactcatgtgttcctgttatatccatcattggtgttggtgggattgggaagacaagcctagcacaattagctttcagagatgaaaggatacgtgcgagctttggtctcaggatctgggtttgtgtatccgatatttatgatgagataacattggcaagggatattttagaatctgtaacaggtgaaaattatcgcagtgttactaaattggatgaattgaagaatgttcttcaagaaaagataagtcaaaagaacttttttcttgtattggatgatgtatggtatgatgagaacaggacaaattgggagaatgaattagtatgggacggagttttatcaacattggatactggactgggaggatccaaaattctggtgacgactcgaaccaacaaagccagtgaactcctacgtgctggagcctgtttacaattagggggattgaatagagatgattactggatgttattcaaaagctgtgcctttggtgagaaacatccaggactgtttcaagaacttaaggaaataggaatgcagattgctgaaagattgaatggtttgcccttagcagcaaaggtaatcggtcgcctattgaatgttgatttagattcaagtcattggaagaaagtgctagagagtgacatatcaggtgatgttatgaaggttctcaggttgagttaccaacacttgcccatccacttgcaactatgcttcagcttctgcagcttattcccgaagaactggcgttttgatcccaggaggcttacagacatgtggatttcacagggttttgttcagaaggaggatgagtctgacaatgacatgaatgttgaagatgttgcgaagggctactttaatgatcttgtacaaagatcattcttcgagagatctttgttagaccttccaatagagtatgtcatgcatgacttgatcaatgaccttgccaggaatgtttcaaaggacgagtataccagaattgagagtgagaagcaaaaggagatcccaccaaacattcgccatttatctatatctgcacatttgtgggccggtatgaagaaaacagagatgaaaaacctgcgcacgttacttgtttggagcaaatcatggccttgctggaaattgtcccttccaaatgatgtgttcaagaaatccaaatacatccgagtgctagatttgactggttgttgcctggagaggttgccaacatcagtgaaaaatttgaagcatttgcgctatcttgcttttagggttcctgaaaaaccattgcccacagcattggtccaactttatcacctagaggttctagtcacaagaggtcactcttgtcggggaagtgaatgtttccaacttccaacaaacatgaagaagaacctactcaaattgagaaaagcttaccttttcaatgtagggggtgccacaatatctggttttggtggacaaactcttctgcatggcccaggggaattccatgtcaagaaggagagtgggcacagacttggagagttaaaggagatgaacaatatccgaggaagattaagtgttaggtttcttgagaacgtggaacatcagcaacaggctgttgatgcgcacctagattgtaaagagcacgtcaaacacttgcagctagagtggagtgaccttccaaggcctattacttctgagttggattctgatgtgcttgaggcccttcgacctcaccctgatcttgaccggctgaatatcacaggttacaagggactgaggtcacctacttggtttgagaccaattggatgaaagcactgacttctgtaatccttgagaattgcatgggttgggtgcaattgcctcctcttggacagcttcctctactggaggatcttgtactgaggaacatgcatgctgttgggcagataggtgaagaattctatgggaacggtgaaatgaagggctttccaaagttggaagaaatagtatttgatggcatgcccaactgggagaaatggtctggaattgaagatggttcattgcttccatgtctcacaagactttacatagctaagtgccctaagcttcaagaagcaccacccttaaatgcaagaccaaaagttgaagtggcgataacatctgattccttaccaagttcgtgtctatttgactccctaatggcatcggcatcgtatctgatcttacttgtcaactgctgcagcttcttgagcagcctgaatactgaccaacttagtcatgttgaggagttgaacgtgaagagctgcacagatccaatgccagcttgtggatttatcggacttagctcccttaaggtgcttagaatcagcaactgttcagcgttactatcgtcagtttgtgtggaagcaggtgaagaacttgacacatgttttttccctcagtcactaagtgaacttgaaatagttgatagcaatattcagtccagtttgctaccaagatacttgcaaggcctaactaacctctcggtgctggtgattaatagctgtgattctatggatttgctatctcttgcttatggaacccatcaccttacttctctagaagccataatcattaaagactgtattttcctatcctcattggatggatttgaaaatctgattgctctcagaaagttagtggtagcagattgtaaaaatttctgtttcttgccagctgatctgaatgcattaatatctctcaaaacattagccatttatgggtgccctaagatgaaatttctcccccagaatggcgtaccagcttctctacagttaattttgctgtcactgttgcatccagagttagacagacagcttcaaaggagggaaggtactgaatgggacaagattgctcatgttcctgaaaagaaactagaggtatgcagtgcttgttatttatttccatcgtattctgatggggttcgttgttcatatcgccttacttactgtatgtagtgttgtgtcatgtaaatatatgtgtggttgttgctcaagctgcattattatcagtgattcagtgttatgaatcatgatctacaaataagtgtcaagtatctcagtttgctatttgatttgcaaattcttctggagatgtttttggcaaaaatatcatgaagtttcataatggcacacctaagtcctaactgtcttagcatatagttccttgacagagttcagtcttgtactaatacttaacctcttgcaggtagagctaattgatttgttgacactgtttccatccagttctttctgacgagtgttgtcatttttggacgtgtggtatgccttcctgaaccactctactacatttacttcaaccgaataactactagtcatgtaagtatgtgactttaattattctatggggaccatggggttgggagcatagcaaaattttcataagcttttgtttcattacaggctcacaaaaactcatatatgggcattactacctttgcagtttatcagtgccaaactgccaattcctgaagtagaggttgtttcaagctgaatgctatttagaccattttgaatggtacgcaacatctcaactagaaaaactctaaatgtcgtgtataatgaacagattataaagtgactatgtcatttgttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0619000, RefSeq:Os06g0619000