Os01g0232400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os01g0232400 |
|---|---|
| Description |
Similar to VHS1 protein (Fragment) |
| Version |
NM_001049038.1 GI:115435489 GeneID:4324279 |
| Length |
5355 bp |
| Definition |
Oryza sativa Japonica Group Os01g0232400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:7332807..7338161 |
| Sequence Coding Region |
7332960..7333166,7334491..7335249,7336267..7336422,7336595..7337518,7337709..7337744 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:7332807..7338161 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:7332807..7338161 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatcagagcaggcgggcggtggagtcgtactggaggtcgcggatggtggacggcgtcacggcggacgacgacaaggtggcccccgtctacaagctcgaggagatctgcgagctcctccgcgcctccgacgccagcgtcgtcaaggaggtcgctgacttcgtcctcaagcgactcgacaacaagagccccgtcgtcaagcagaaggctttgcggttgattaaatatgctgttgggaagtctggtactgatttcaagcgggaaatgcaacggcactcagcagctatgcgccagcttgttcactacaagggacaccctgaccccttgaaaggggattctcttaataaggctgtccgtgaaactgcaaatgatgccattgctgctattttctccacagaggaacctaaacctgctgttgcaacagaaggtcttggcaagcgcatacagggttttggaaatactaattttgagccatcaagagatgacaaaaaatctttccttagtgagctaagtgaagtagtgggcattggcagtgcttccattaaacagggtttgagcaactttgctgcttctcattcatcaatgataacaaatgataatggtggtccgtacaagagcccaaaccttcgtaggtctctgaccacagaaatggataaatatggcaggtatgatccaagtgaaattcaaggcgagagccgttcttcatctggtgcttcaaagaatgttagttctggttcatggggtcctagtccatccagttctgcaccaactgatgatactggttcaagtcaaacaggggttaagactcgtgaagagagacttttagatacaattgcaacttcaagtggtgtgcggttgcaaccaactcgagatgctctgcaaatatttctaacagaagctgccaaattggacgcagttgctttgagccgtgcccttgagaacaaattgaattctcctttatggcaggttcgcatgaaggcaatttgtgtattggaagcaattgtaaggaaacaggatactgatccttattcaatcattacttcatatttctgtgagaacagtgcatctgttgttagatgctgtgagcttccgcacgtttctctcagagaaaaggcttcgaaggtcttaaatctgctggttggggaacaacctactggaagcaataatttttcagaaacaaagacaacagtacctgctgcacagatgcctgatttgattgatacaggggatcaagatgacccaggagctcaaaattcagctcaggaaggtagcgagaggataatggggaatagcatgtttacttcttcggttgatgatttgctgggtggtgaacctattgctgatataagtaccaccaccagtaatggtaatggaggtgatccgtttgcagacgtttcattccatgagacagcagatactaaggatactaacgacctattctcggggatgacggtagaagaaaaggcaacagcagccttgcatgatagctcatcaataaacaaaaatgaattgtcagatatatttggcagcagccctgagccattcttccaagaaagagtagaggataaaggaaccgtgaatgatttgatggctggtttgaaccttaatggaactgcccaagctcagcctgggattaaaacagaatctaacaatactgtcaatgtttcacagctctttgacatgaacagtcagacaacaaatgtggctaattctgcagcaatgactggtattcttggccaaagcttttatcagcaacagcaggttcccttgcagtacaacttgccatcacagatgctgttaaatccagcatttgctgggcagcaattaaactatggtgctatgagtgttcttcttgctcagcagcagcagctgctgcaaaatctaggaaatttcaatgctgggttgggacattcgtctttgaatgcaatgaacagcggaaatgcatctgtgcttcctgatatcttcaattcaagtaaccaacctcaacatgttgctgtgatgagcaactcaaagaaggatgaaactaaagcttttgattttgtttcggatcatcttgcagcagctcgtggttcaaaaaagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDQSRRAVESYWRSRMVDGVTADDDKVAPVYKLEEICELLRASD ASVVKEVADFVLKRLDNKSPVVKQKALRLIKYAVGKSGTDFKREMQRHSAAMRQLVHY KGHPDPLKGDSLNKAVRETANDAIAAIFSTEEPKPAVATEGLGKRIQGFGNTNFEPSR DDKKSFLSELSEVVGIGSASIKQGLSNFAASHSSMITNDNGGPYKSPNLRRSLTTEMD KYGRYDPSEIQGESRSSSGASKNVSSGSWGPSPSSSAPTDDTGSSQTGVKTREERLLD TIATSSGVRLQPTRDALQIFLTEAAKLDAVALSRALENKLNSPLWQVRMKAICVLEAI VRKQDTDPYSIITSYFCENSASVVRCCELPHVSLREKASKVLNLLVGEQPTGSNNFSE TKTTVPAAQMPDLIDTGDQDDPGAQNSAQEGSERIMGNSMFTSSVDDLLGGEPIADIS TTTSNGNGGDPFADVSFHETADTKDTNDLFSGMTVEEKATAALHDSSSINKNELSDIF GSSPEPFFQERVEDKGTVNDLMAGLNLNGTAQAQPGIKTESNNTVNVSQLFDMNSQTT NVANSAAMTGILGQSFYQQQQVPLQYNLPSQMLLNPAFAGQQLNYGAMSVLLAQQQQL LQNLGNFNAGLGHSSLNAMNSGNASVLPDIFNSSNQPQHVAVMSNSKKDETKAFDFVS DHLAAARGSKK</aaseq> |
| Gene Sequence |
<dnaseqindica>154..360#1685..2443#3461..3616#3789..4712#4903..4938#gctcacccgcgccgcccacctcccctcccctcccctcctctcctagacccggtccaccgccgcccctctcagatccgccgttgccgcggcggcctcggcagctcggtctccccccgctagggtttcgccgtctccgatcggaggggcgcagcgatggatcagagcaggcgggcggtggagtcgtactggaggtcgcggatggtggacggcgtcacggcggacgacgacaaggtggcccccgtctacaagctcgaggagatctgcgagctcctccgcgcctccgacgccagcgtcgtcaaggaggtcgctgacttcgtcctcaagcgactcgacaacaagagccccgtcgtcaagcagaaggttccccttctcctcctctctctctccccttgtgtgatctcgggtgcgagggtattaggtgggtggcggcgaggtggatcgatcgatcgatcgattgagtacttatggattggtgttcttgtgttctcattgatgatgatgatgattagttctgtggccacggttcttgtcgaactctggatggtcgaaggatggcgcacgtatccggggagtgatttgagtgggtgactgatgatttgtgtgattgttttgagttcatgcctgcctcctggattgccgatcagttgaggggagaagaggctgtcgaagatatagttctgttttggccttctggatgtgggtttaataagggaaacggcgaaagtagggaattgcagttgttgaatgaaatagttattggttgtgcgccacagcccctagcataaaagagcagtgccttggtgaaggtgtaagggagaaactggctatatatttttgttcttcactactaggtggcaacaatatcttgctcacagctcacctggagttgatggcctgttaccgtggattcaaattagctagaatggattcatgtgtcatagtccctatcaattgaaatttaaaactagcctactgcttcttgaagagctgagaatattctccacatccaactatctggcatgtaactgttccatatcgactgagaccttagtggcttgtatggttgtttttggtgaatgctgttttatagagcagaagccttatgtggctaatgaactacaacaattgttatagctatggaccaatggaaggtgtttttttgtaaactatggtgtctacttttgatttggatttaagggatgttttttttttttgggggggggggggtttaatgctgaaccaaacacatacatttgaggttgtttagtgaacttgaatgtgaattcagatttcaacttgtgacaactaattttaattttataaatgaattgctttacattcatggcatgttgcgttctgactcctgatctcgtaatggtaaagctcataccagccttctgagtagactctctgcgcaaaggaaatgctgcttatgggcataatatttgctttgctaagcatttgtactgaatgttacacgtcagtcctgagcagtggcacattgcaccttttgcaaacatggtgacccccacatatatcatagaatgtaccctaatgtttttgatggaatttttaggctgtcctaacttatgtctaacatttaagtacagtggtgtttaattattgaggagactagcttctgttcttcaattctgtactaaccttttcaattgctcttttccaggctttgcggttgattaaatatgctgttgggaagtctggtactgatttcaagcgggaaatgcaacggcactcagcagctatgcgccagcttgttcactacaagggacaccctgaccccttgaaaggggattctcttaataaggctgtccgtgaaactgcaaatgatgccattgctgctattttctccacagaggaacctaaacctgctgttgcaacagaaggtcttggcaagcgcatacagggttttggaaatactaattttgagccatcaagagatgacaaaaaatctttccttagtgagctaagtgaagtagtgggcattggcagtgcttccattaaacagggtttgagcaactttgctgcttctcattcatcaatgataacaaatgataatggtggtccgtacaagagcccaaaccttcgtaggtctctgaccacagaaatggataaatatggcaggtatgatccaagtgaaattcaaggcgagagccgttcttcatctggtgcttcaaagaatgttagttctggttcatggggtcctagtccatccagttctgcaccaactgatgatactggttcaagtcaaacaggggttaagactcgtgaagagagacttttagatacaattgcaacttcaagtggtgtgcggttgcaaccaactcgagatgctctgcaaatatttctaacagaagctgccaaattggacgcagttgctttgagccgtgcccttgagaacaaattgaattctcctttatggcaggtgactttacgatgttctttgttcatctacttcaaccttacaagttacaatagttttacggctatgggatggggtacctttagtctatattatggtttacactgcttctggcaagtgactagtgtatattgatgcacaaatcgatattttttcttattccgcagtcaaatggaagtactttggatatctaatatatagatactttaaacatatgtttgttcaaattttgacaagtgcttattgagatttcaaacttcaaaagtaaaaacactatttatgagttgacttgtgaccattcacatatacttttttatggtaaaagttcagagctgtatatataatagtgagtggtatgtaaacatattgatgcttaacttagcttccaattttcaggacagcatagtttatttgaataataaattaataacatgtgaaaaatacagttccggcatgaactctttgcatgttaaaagtgcttagttaagggcttttacacccgcctccctactttgcggtttaggacatgtcttagcgtatttaaagatttacccagtaggcagcatactggttctgaaaaaaatattaggcagtgggcagcatatccttttaacatggtcaaaggaatcaaaatgttttgccttgttatacattccaattatcaatggaagtccacctagcatctgaattttaaaaccaggcatctaacttctcaatacttccataaaaccccctgaagtggttttgcatggtggtttcacctataaccccatgaactttcattggaataaggtttatttctactaggggttagcaatacggagtatgttcagaattagtgcattcattatctatgatgttctctgaccttttcttatatttttgatacaatattatctcacattatttatatacatgattagatcatatttataataccattttatcttgaccaagcacttccaccattgttttcactttatatattcataaatattcaatgcatttgttctacttcaggttcgcatgaaggcaatttgtgtattggaagcaattgtaaggaaacaggatactgatccttattcaatcattacttcatatttctgtgagaacagtgcatctgttgttagatgctgtgagcttccgcacgtttctctcagagaaaaggcttcgaaggtcagtaaagttgcaagccattaataaataaatttgtataatgcaccatttattttctgcaaattgctatgtagaatacatgctttgcatctctttgattctatctctctctaggctatagctatttccacctccaattattactatataataaaccgtgccattttcttaggtcttaaatctgctggttggggaacaacctactggaagcaataatttttcagaaacaaagacaacagtacctgctgcacagatgcctgatttgattgatacaggggatcaagatgacccaggagctcaaaattcagctcaggaaggtagcgagaggataatggggaatagcatgtttacttcttcggttgatgatttgctgggtggtgaacctattgctgatataagtaccaccaccagtaatggtaatggaggtgatccgtttgcagacgtttcattccatgagacagcagatactaaggatactaacgacctattctcggggatgacggtagaagaaaaggcaacagcagccttgcatgatagctcatcaataaacaaaaatgaattgtcagatatatttggcagcagccctgagccattcttccaagaaagagtagaggataaaggaaccgtgaatgatttgatggctggtttgaaccttaatggaactgcccaagctcagcctgggattaaaacagaatctaacaatactgtcaatgtttcacagctctttgacatgaacagtcagacaacaaatgtggctaattctgcagcaatgactggtattcttggccaaagcttttatcagcaacagcaggttcccttgcagtacaacttgccatcacagatgctgttaaatccagcatttgctgggcagcaattaaactatggtgctatgagtgttcttcttgctcagcagcagcagctgctgcaaaatctaggaaatttcaatgctgggttgggacattcgtctttgaatgcaatgaacagcggaaatgcatctgtgcttcctgatatcttcaattcaagtaaccaacctcaacatgttgctgtgatgagcaactcaaagaaggatgaaactaaagcttttgattttgtttcggtatgcgctttcatcatgtccctaatttattcttatttcatttcatatatagacgtgccaatattaccaactgtcataatgcgtgggcagtatgaatctatggctctatgctagttgcataagatgttacttcagtttttgacatctgaagcaccatcctctggtgttaacagtcctagttttctttcaggatcatcttgcagcagctcgtggttcaaaaaagtaacccgagagcgatgggtatgttcagaatgtagcaacaatgcatttgtttggcttcacgcaaacttcactcgtactccatcgattagctggatcaatctcaggacaggttttgcatgttgtgctgcaacagatgacccaagaaagaaagaaaagaattcacgacgggggattgtgttgtatcatgtatctagacaaatgtcgatttttatgttgaaataagctgtacttatcttctcagtttcttttgatgccttgcctttttttttttcttttaaagagtcggacattgtagattgttctcgggcgggattttgtttttgctgctgtacaacagcatatttggttcttttgacgggaattgtaaagcttgctacgttaataacaggtgccatacgggaataatgatgcctcttgaacc</dnaseqindica> 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