Os09g0514500

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0514500| Description = Hypothetical protein| Version = NM_001070195.1 GI:115480132 GeneID:4347567| Length = 5653 bp| Definition = Oryza sa...")
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Gene Name

Os09g0514500

Description

Hypothetical protein

Version

NM_001070195.1 GI:115480132 GeneID:4347567

Length

5653 bp

Definition

Oryza sativa Japonica Group Os09g0514500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20685603..20691255

Sequence Coding Region

20685666..20685815,20686687..20687065,20688877..20689011,20689099..20689178,20689362..20689422
,20689505..20689590,20689697..20689766,20690121..20690293,20690361..20690433
,20690839..20690996

Expression

GEO Profiles:Os09g0514500

Genome Context

<gbrowseImage1> name=NC_008402:20685603..20691255 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20685603..20691255 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggagcgtcgtggtggtggggaggtgaacggggtggtggagatggaggacgcggtggggatactggtggactacctggtgcggccggcgctgcggaaggggagcaggatgacgccggagaaccaggccgacgtcgcgcgccaggttcatatggcagtcattctgtataactattaccaccggaagcagttcccacagcttgcttttgctgatgcaatgaggttcttcaaatgtgcatctcttactcttggtgacagtttgctcgcgtactccaatatggtccaccaacatgagaagagttctggaagtcctggggagggtgtgaatctctctgtgactgacaaagcagtcgtggatgcgtgtggaattgctgaagccctcgacgcaaaccaagactctccagacatggccatgtggccaatttcaaaggtcgctgtgcttcttcttgattcaactaggaaaagatgtctgctggagagtggttctgtcggtaaaaatgttcgctcccttttggagaaagagattgacagtgagatacccagagttaaaaatgcactgcctcctgttgtagatgtgtcaactatgaagttcgtgagctgttcagttaatgtaaaagaaacagcagcagcaaatgcaggatttgtggatatggaagcaggtgttaaaatgaacagcaacaaaagaagagagaatcactctctagacttaaatatttctcatgatatggctatggagaaggcacttgtaataaagaatactgagttggaatggagaagtgcagaagtgtcaaaaaagtcagattttcatcaaggtggcggtgctaaggacaacaaggatctgaagtttgcttccttcaagtcatatctgaaaaaacgggatgatcttcatcgcaagcaacgcatgattgaagatgaaactgttcaatttgatatggacatccagtcagtctttgctggaggggagtggacaccagaagcgatgtcactactagaaaaatatggaattcttgtcgatagcttagatatggtggaagttaatggttcatcctattctggagatggatatgaaaccttaaccattgagaggaagaaattgacagtggaaagactcctccgcaataaatgccaggagttggatgaggtctgccgtgagaataattggattcttccgagatataaagttatgccatcactaacagatggcatgtacgtggccaatgtagatattgcatgcctggagttcagccaaatgacatttggcgatccaaagacgaaccctcgtgatgcacgggagtctgcagctgccaacctgctggctgagcttcttaagaaggccgatgccaacagggagcacacctga</cdnaseq>

Protein Sequence

<aaseq>MEVERRGGGEVNGVVEMEDAVGILVDYLVRPALRKGSRMTPENQ ADVARQVHMAVILYNYYHRKQFPQLAFADAMRFFKCASLTLGDSLLAYSNMVHQHEKS SGSPGEGVNLSVTDKAVVDACGIAEALDANQDSPDMAMWPISKVAVLLLDSTRKRCLL ESGSVGKNVRSLLEKEIDSEIPRVKNALPPVVDVSTMKFVSCSVNVKETAAANAGFVD MEAGVKMNSNKRRENHSLDLNISHDMAMEKALVIKNTELEWRSAEVSKKSDFHQGGGA KDNKDLKFASFKSYLKKRDDLHRKQRMIEDETVQFDMDIQSVFAGGEWTPEAMSLLEK YGILVDSLDMVEVNGSSYSGDGYETLTIERKKLTVERLLRNKCQELDEVCRENNWILP RYKVMPSLTDGMYVANVDIACLEFSQMTFGDPKTNPRDARESAAANLLAELLKKADAN REHT</aaseq>

Gene Sequence

<dnaseqindica>64..213#1085..1463#3275..3409#3497..3576#3760..3820#3903..3988#4095..4164#4519..4691#4759..4831#5237..5394#cgacggcggcggcggcggtttggtttccctcttgtttgtattttaatccgtcgtgggtgggtgatggaggtggagcgtcgtggtggtggggaggtgaacggggtggtggagatggaggacgcggtggggatactggtggactacctggtgcggccggcgctgcggaaggggagcaggatgacgccggagaaccaggccgacgtcgcgcgccaggtgagcctgcgatgcgagaatggatggactttggtggtggggtttcgggtcccggggtctatgggaggtttgggggggtttcgggtggtggtcgccgtcggcgacgcgatcagggcgtgtggcgcgggtttgttagcttgtttttgtgggggcgccgcgccgcgggctgcgacggcgcggcgcggcgtgcggagcgagcgccatggcttgggccgcgacgcgccagcgggatggtgtggcggcggcgcgccgtgagcgtgtgatggttggcatgggcttccgagttccgacaagcccgagagtagcggagaaggcggctgcgggcgtaggtgccaacgaatagacggaggcggatttcaaaagagggaagacgtaaactaactgggacgttccagatcgggaaggctttccctcttctggcaattgtgttttttttttccattccgaggagggattgggatttttcaaatttcaagaggaaagggaattcagatgtttccattaaacctctaggaaatctcgggagttctaatatatggaaattttttggtttttttttgtggggtgggggggggtgcgctcattgattaaaaaaatttgcaggatcgtgggaggcgtgacaacatctcctatattctgtattatagttgtgtacaaagatagcattatagagtagcatgttacctaactttatctcttatattctgtaatgtagctgtgtgcaaatatggcaaaattgagtgccatgttacctgattttttatctcttacattctgtactgtatccctatgcatcatacattgcattctctttaggcaacttgtaatacacggctgaatacttcctcgttgtgccaccttgtttttgcaggttcatatggcagtcattctgtataactattaccaccggaagcagttcccacagcttgcttttgctgatgcaatgaggttcttcaaatgtgcatctcttactcttggtgacagtttgctcgcgtactccaatatggtccaccaacatgagaagagttctggaagtcctggggagggtgtgaatctctctgtgactgacaaagcagtcgtggatgcgtgtggaattgctgaagccctcgacgcaaaccaagactctccagacatggccatgtggccaatttcaaaggtcgctgtgcttcttcttgattcaactaggaaaagatgtctgctggagagtggttctgtcggtaaaaatgttcgctcccttttggagaaagagattgacacatctagcactagtgagcatggcagcaacaagccagaaggacaagatttagaaaatgaagagactggaccatatgtcctccaaaagttagcattttcagaggtggagcgtagaacaggttgttactataccattttgctctattttgttttccatgtgtggctattttcttaactaaacaaattttgccctctttttttcattatcagtgtgcttcatccgttgagacttttgcacccccagtatgttagtttcattcgatttgaactattcaattagcttcggaccatgcctatgtagcttgaaaactttggttagttgaaaattaccaaccagaaaagctattggtcccgaaacatgaatttatagcattgctgatacatcaataaataactaggaacattgtagtgtttaatttcccttgtaaatgatatgggctgatatcaaccaattctctgttcgactatattattttatctgctttatttttcatttatgaatcatataactgaaattaatgtatttcatttctgtgattttcttaatagagattaagcggtcaagcttgcgtcttcttgatgagcatttagcatactcattgactaaaaaagggacaactacaaagctgttcatcttacagtacgagcaaactgcaaaaggcaacttcgcggaaatgcctattgaagaattgatcaagaggtttgctgtttacacacttgcgaatttgctctctgatcaacaatggttttatttattaaacaaaatctgctcactgtgtattactgtattgatgtaaatttatatcctttatagtccatagtttgtttagaaacatttctattgtattgaatgctgtgcttgctaggtgctaaagctcttctttttattctcgtttgagcttttgactaaacttcattacatgcatgcttgatgttcttttgttattattatactaatcatgaaaatattggctaattgtacttcctaaggccgagttcatttgtgtgagttcccaactcactcccctcgttttccacacgcacgcatttcaaactgctaaatagtgtgttttttgcgcccccccccccaaagaaaatctaaacgaaagttgctttaaaaaatctattgatcactcactcgctattccatgcggggaggtggagttcccaactccaccttccgaatacagcctaatttatgtagctgtctttcaattgctggtagcttctactgttctcagtataacagtttctaacgttttcatttttttttcctatttcatttcctgtttaacaggatgattggtcctgtagttgaaaaacatccataccctacaacaacagttgttgctgagagctatcacatactcccatataaggatattctgtttgactgcctgcacaggtaacatatggttttgtttcagctatttatgcatgaaagaggtatgttgcaggtaatgtaaaatgaaaggagtataggaaattactacttggcctaattatggttaaaataatgcttcttgtttcaggaaatggcattttgattcttcgctgagcatgccaaaggaagaaacacgtcgaaatggaaagtcttcatcgcattctgaaatagatgaaaattcaaaagagcaagaatataatataaaagggtcaactcaaaagaaaattaaacgagatataaaagtacttggcagtagtgacaagaactacagctgtaccagtagaaacaaaagaagcagtaacgtgaacagcaaaagaaaatctgaagtcttcagggccacagctgctgacggtgcagagggtcttgacagtgagatacccagagttaaaaatgcactgcctcctgttgtagatgtgtcaactatgaagttcgtgagctgttcagttaatgtaaaagaaacagcagcagcaaatgcaggatttgtggatatggaagcaggtgagttctatcaatctaccataatttgatttctgttgacccgtcattgtttctcctccatgttttgatagaatcaattgactttaggtgttaaaatgaacagcaacaaaagaagagagaatcactctctagacttaaatatttctcatgatatggctatggagaaggtaagataaattcttgacgatgttgacatatcagaattctggaaagcagaaggatcacatgcaccttctgaacaaagacatactgtattgttgatttttttttttagtttgatgattatagtatgtaagtttgtatgtgtttcatttacccttctcaagttgaagaagtaattattgtatcaggcacttgtaataaagaatactgagttggaatggagaagtgcagaagtgtcaaaaaagtcaggttgatgtaaccttatccaagccagcttatttatcctattattatttataatttccctaattttttaatgtatgcactgcagattttcatcaaggtggcggtgctaaggacaacaaggatctgaagtttgcttccttcaagtcatatctgaaaaaacgggatgatcttgtatgttgtgtcggatctttcattcgaaaccttattgttcttggtgcatcaaattgtccttttactcaacctgatatgaactcaactggctatttttatgtttcagcatcgcaagcaacgcatgattgaagatgaaactgttcaatttgatatggacatccagtcagtctttgctggtattctatctttcttgaatctaaacatggctaaacttcgcaaccacgatttgtagttatatgattgtgaaaaacatcatatctgtccacaaggaaacaggcatacagatgtggtaagaatagttggatacttccccattccatgtggatcatataccacacggttgggcagggattccatcccacacatccaaacacaaacatgcctatgttatttattgtcttgtagacaactagtaattgccaagttctgagtttttatatttatgtcaatggttatctactctcatcattttctcttaaatcctaccagctccaaatttttcagtattcattatgtttaaacatattcaggaggggagtggacaccagaagcgatgtcactactagaaaaatatggaattcttgtcgatagcttagatatggtggaagttaatggttcatcctattctggagatggatatgaaaccttaaccattgagaggaagaaattgacagtggaaagactcctccgcaataaatgccaggtactcactcactcactctctatcatgttttcctcctatccctgcctttgacatttagttgatgcaggagttggatgaggtctgccgtgagaataattggattcttccgagatataaagttatgccatcactaacagatggtatgtggaaatattacttatctcttatattccccgcctggtcaacaggccaagtatgggtccttgcacctcataggcataagaattaacattgccatgctaataggtcttttaccacacagagtttgattgccattttaacgatttcaacccaaaaactgaactttttccttgcatttgttacgatattgcacattctgttgatgtcgtgatccgtattgtagatcagttattagccttgcaatcacttggtaataattttctagtctccagttagcgatgatcagaaatggctgtttgcccaactgtcaacctctctctccctccctatctttattgttcttaagccgttgcattgcacatcatgtcaagcacttcttttacaaggttttcctatcttgtcaggcatgtacgtggccaatgtagatattgcatgcctggagttcagccaaatgacatttggcgatccaaagacgaaccctcgtgatgcacgggagtctgcagctgccaacctgctggctgagcttcttaagaaggccgatgccaacagggagcacacctgacgcaagattactgaagtaaacacctgaaaattggtagacggcaggtagctgcaaagctgcaactcagcactgaactttctgaaagacatcaccttcatttagacattttaccttacattggttactcttgtcattcaaactgtagctgttgcttttttaataattcttcggtcgcaaattatgtgacgctgcaggtgcagtgtgaattttgtagtcattttaaacaatagatcttggtgaacatgtctgtttctgcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0514500, RefSeq:Os09g0514500