Os01g0233800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0233800 |
|---|---|
| Description |
Similar to Viroid symptom modulation protein |
| Version |
NM_001049048.1 GI:115435509 GeneID:4324289 |
| Length |
3802 bp |
| Definition |
Oryza sativa Japonica Group Os01g0233800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:7399489..7403290 |
| Sequence Coding Region |
7400778..7401502,7402172..7403045 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:7399489..7403290 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:7399489..7403290 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaactccatgtcatacaacaagctgtccataacgaatgacagaatggatttcaatacccgtggaaatgcagtccccaatggcaaattagatcggaatcagtcaggtgtttcagccaatcgatcctcagcctccaaaccaacagcacgctccaagaagaaaccggatcaagctgacaaaacaaccccaaatccagcgcagaattcagcatcatcagcaacaagatccgaagcagcgaccgtcacgacgaccacgaaatcgccggcgatcagcgtggacagaagcagcatcgcgagaagcaacagcctggacagcttcagctacggccaggcgaagcggcacaccggcggcgacagccggtgggacgccgtccggtcggccagctccgtggactgccccctcggcctcgtccacttcaggctcctcaagcggctcggctacggcgacatcggcagcgtctacctcgtggagctcagggacaccgacgccttcttcgcgatgaaggtgatggacaaggagtcgctcatcagcaggaacaagctggtcagggcacagaccgagagggagatcctcggcctccttgatcatccgttcctccctacgttgtacacgcacttcgagaccgacaagttctactgcctcgtcatggagtattgctccggcggcaacctccattcgctccggcagaggcagctcaacaagcatttcaacgagcaagctgcaaggttctacgcatccgaggtgttgcttgcgctggagtacctgcacatgctaggcattgtgtacagggacctcaagcccgagaacgtccttgtccgggacgacggccacatcatgctctccgacttcgacctgtcgctgcggtgctccgtgtgcccgatgctggtgaagtcgtcgtcggtgcacgcgggcgccaacggcgtcgtgaagggcctcgccgccggtggcggcggcgacggcgagggcgtcggcgtcggctgcatgcagccgtcggcgttcttgccgcggatcctcccaaagaggagccgcaagacgtccaagtcggacctcgggctcctccacggctcgccgctggagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtacctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttcggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgcgccacgctctgcaacgtcgtcgagcagccgctccggttccccgacggcggcgcgttcccggcgccggcggcggcgagcggcgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtcgaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgctcgtgcgcagcgcccacccgccatcggtgcctgaccccgtcgacttcagccagttcggcgtgagggagaagccggcggcggcgccgacgaaggtggccaagccggcggcgagcgattcctcctccggcgacttcgagtatttctag</cdnaseq> |
| Protein Sequence |
<aaseq>MNSMSYNKLSITNDRMDFNTRGNAVPNGKLDRNQSGVSANRSSA SKPTARSKKKPDQADKTTPNPAQNSASSATRSEAATVTTTTKSPAISVDRSSIARSNS LDSFSYGQAKRHTGGDSRWDAVRSASSVDCPLGLVHFRLLKRLGYGDIGSVYLVELRD TDAFFAMKVMDKESLISRNKLVRAQTEREILGLLDHPFLPTLYTHFETDKFYCLVMEY CSGGNLHSLRQRQLNKHFNEQAARFYASEVLLALEYLHMLGIVYRDLKPENVLVRDDG HIMLSDFDLSLRCSVCPMLVKSSSVHAGANGVVKGLAAGGGGDGEGVGVGCMQPSAFL PRILPKRSRKTSKSDLGLLHGSPLEFNAEPTDARSMSFVGTHEYLAPEIIRGEGHGSA VDWWTFGVFLYELLHGMTPFKGSSNRATLCNVVEQPLRFPDGGAFPAPAAASGVARDL IRGLLVKDPGKRIASRRGATEIKQHPFFEGVNWALVRSAHPPSVPDPVDFSQFGVREK PAAAPTKVAKPAASDSSSGDFEYF</aaseq> |
| Gene Sequence |
<dnaseqindica>1290..2014#2684..3557#tctccatccacctattctcgccccaccctctcctcctcctcctcctcctccgcacccacatccaggccgtcccgccgcggctggatgagggctcatcgatcccttgccggccgccgcgaccgcggtgcgtccatggagcttgcgcgccttggcctctcttctgtcaccgcgatgtctcgccgtggagcttgaaggccgccgttggttcggtcactgctaggtccgtaaatttcgttctttgcttgtgtgaccattctttgctcgaatttgttgtgattggtgggagattcttctgcggatgatgaattctctttttttttcttctctcccatgcattggggaggtagggaattgggtatcgatcggttaggttcagttcttcagtttgattggtttatattacctcagttttttaatagattacgccgttgactttttctcacatgtttgaccattcgtctttttcaaaaattttatgtaaatgtataagatataaatcacacttaaagtaccatgagtgataaaacaactcataacaaaataaattataattacgtaaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacgacgtcatctattaaaaaacggaaggagtatttaatatgttcgtttgtatctgtttagttagaatttacaattttgggcatcgtgatcatgtcgacgtgctggtttgacctttggtaggaaatggcacacatgttgttttgttcaaagaaactcaaaacggatcaagtatagatgtgccttttgttgttctagctgattctttttttttcaattataaagcttcaaaagtatattttgtgatgcgttcaagacatttgcacgacctatattatatatacctgcatgttgtattatattctaaacacatagtatgccctgtttggctcgatattgaaaaactatcatgatggacagtatgctataggagacatggggaaatgtaaaaagaaaaaaaagaattaaaaaaaaggtgaacgcatatgatctgatgatccgtatatatgcatttgtcggacctgcatttaccgttcttggagatgctcttgttcattggccttgtctgtttgagttccatataaatgtatctggaacaaattctgttgtctcacattctgcttgattttgaaatccattgaattctgcttctggctgatacttatgaggtcaggcagtaaatgatcaataaaccattatcatcactgatttgttactatcctaatctgtgcattttgtgcaagtttcagatgaactccatgtcatacaacaagctgtccataacgaatgacagaatggatttcaatacccgtggaaatgcagtccccaatggcaaattagatcggaatcagtcaggtgtttcagccaatcgatcctcagcctccaaaccaacagcacgctccaagaagaaaccggatcaagctgacaaaacaaccccaaatccagcgcagaattcagcatcatcagcaacaagatccgaagcagcgaccgtcacgacgaccacgaaatcgccggcgatcagcgtggacagaagcagcatcgcgagaagcaacagcctggacagcttcagctacggccaggcgaagcggcacaccggcggcgacagccggtgggacgccgtccggtcggccagctccgtggactgccccctcggcctcgtccacttcaggctcctcaagcggctcggctacggcgacatcggcagcgtctacctcgtggagctcagggacaccgacgccttcttcgcgatgaaggtgatggacaaggagtcgctcatcagcaggaacaagctggtcagggcacagaccgagagggagatcctcggcctccttgatcatccgttcctccctacgttgtacacgcacttcgagaccgacaagttctactgcctcgtcatggagtattgctccggcggcaacctccattcgctccggcagaggcagctcaacaagcatttcaacgagcaagctgcaaggttggttttggtcacattttcaagatcactccagcatatatcctctttgcctcaacatactacatacaatgcttgcacattgacatggatatatgtcattgagtaaatttgcactttacaccaggtaaaacgtactactttgttttccctttacaagaggtttagcacatgttttagctttacaccagggattattgaagtattccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctagacacacatctatatctaaatttattaacatctatatatatgtgggcaatgctagaatgacttatattatgaaacggaggaagtaagtttcacttaacactaggacacatattatctaaaaacactaggacacatccttaaacctatataaatttgaagaaattttataaaagtctgaatggaattttctgaagcatggtctaaattgaagaagcctcaaaagttccactcatatttcacaaggtttcacaacgatgtacgatgcaacctagtacaaactgcagagtatttcaaaacaccctggtataaagtgaaaatgcatgctaaactcggtgtaaattgcctttaaatcatttgctcaccatgattctgaaaatctctgaatgttttttttcatcaggttctacgcatccgaggtgttgcttgcgctggagtacctgcacatgctaggcattgtgtacagggacctcaagcccgagaacgtccttgtccgggacgacggccacatcatgctctccgacttcgacctgtcgctgcggtgctccgtgtgcccgatgctggtgaagtcgtcgtcggtgcacgcgggcgccaacggcgtcgtgaagggcctcgccgccggtggcggcggcgacggcgagggcgtcggcgtcggctgcatgcagccgtcggcgttcttgccgcggatcctcccaaagaggagccgcaagacgtccaagtcggacctcgggctcctccacggctcgccgctggagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtacctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttcggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgcgccacgctctgcaacgtcgtcgagcagccgctccggttccccgacggcggcgcgttcccggcgccggcggcggcgagcggcgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtcgaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgctcgtgcgcagcgcccacccgccatcggtgcctgaccccgtcgacttcagccagttcggcgtgagggagaagccggcggcggcgccgacgaaggtggccaagccggcggcgagcgattcctcctccggcgacttcgagtatttctagctcccatctgtgagtatttctaggaactgaaaaatacatttagatacagaaaaaaaatatacagtctattgattctttgttactgttgtattgctccttaattacagtacacccatacatgattcttgggatcctggtatacacatgtacaaacaatgtgatagcttgttgctaacaatgattaatgaactgtaaaatattctgttacactactgacagatgcagatgttcatttctttagctga</dnaseqindica> |
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