Os06g0620200

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0620200| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001064624.2 GI:297606186 GeneID:434154...")
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Gene Name

Os06g0620200

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001064624.2 GI:297606186 GeneID:4341543

Length

2758 bp

Definition

Oryza sativa Japonica Group Os06g0620200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25784233..25786990

Sequence Coding Region

25784435..25786504

Expression

GEO Profiles:Os06g0620200

Genome Context

<gbrowseImage1> name=NC_008399:25784233..25786990 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25784233..25786990 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccggagccggagctacgcttgtgtccaagcgctccgatgccgacttctcggctggccgcttcagcctgtacgtgcaggccgacggcaacgtcgtcctgtacctcaacctcgccgccggcaacgtcgacccgtacaacgcgtactgggcgaccggcaccaaccagcccggcaacacccaggacggcaacaccactctcttcttcgcctcgccggggcgcgtctattaccaggtcaaggacgggacggtgcacgacctgacaactcccatggcgaaggcgaactactaccagcgcgcgacgctcgacccggacggcgtcgtccgcgtgtacgtccggcgaaggagcccgacgagctccacttccaccaccaccgccaacgcgtcgtgggccgtcgccggcatgttccccggcgacggctgtagcatggggacccgtggcctggacggtttctgcggccccaactcgtactgcgtcgtgtccgacgacggccggctcgactgtgcgtgcccgagcggatactccttcgtcgacgcgcagctacggtaccgcggctgctcgccggcgttcgcgccgccgaggtgcgacttcgtcggggacgatgtcgccaaccgctccggcgaattcgtgatcgccaagctgcccaacaccacctggacggcctcgccgtacaaggtatactcctacacggcggaggagcagtgcggcggcttgtgcctgaacgactgcttctgcgtggcggcgctgttcgacggaacccgctgcaccaagatggcgtccctcacgggcgccggacggcaggggagtaacgtcacggggaaggcgctgatcaaggttcggacgcgcagtacccctccggcggcggcggtggcgcggaggagggcgccaccgctgccgtacatactcctcctcggtttctcggcgtttctcctgctcgcctctacgaccagcctcgtgctcctgcaccgccgcattagaagaagaagctccagcgaccatgacatggtgatgagactcttcaccaggaaggagctttacgatgccaccaatggtttccagaggttgctaggaagaggtggcttcggcgaggtctaccatggcgtggcgaattcgctgcatctgctgcactcacctgacactgacatcgcggtgaagaagctcatcgtctccaacgagtacaccgagagggagttcgcgaacgaggtgcagtccatcgggaggatccaccaccggagccttgtccgcatgatcggctactgcaaggagcgggagcagcggatgctcgtcttcgagttcatgccggggggctcgctccggagcttcctcttccaccagcagcctcgacgacggccgccgccgccgccatggacctggcgcgccgaggcggcgctcgccatagctaagggcatcgagtacctgcacgaagggtgcgcttcgccgatcatccactgcgacatcaagccggacaacatactgctggatgacaagaacaacccaaagatagccgacttcgggatctccaggctcctcggcgatgagcagctgcacaccacggtgaccaacgtgaggggaaccagagggtacatcgcgcccgagtggctgcacggcgacaggcgcatcgacaccaaggtggacgtgtacagcttcggcgtcgtgctgctggagatgatttgctgcaggagatgccaggacccgatcaccagccagcttcatcaggatgacaatggcgattgcgatgatgacaccgtcactctgttcgggtgggcagccgggctggtcagccatggtagggtggaggtcctcctgcgcagcgacgatgatgcggcggaggatctggagagagtggagcggttcgctcgtgtggctttctggtgtatcgtgcacaatccgtcgctccggccgacgatccatcaagtggtgcagatgctggagggtgtggtcgaggtccacgcgccgcctcatcttccgagctatacggattcatcgtcgtcctcgttcatccatacggattcacctgctctcaggccaagaggctcttcttgtccagtcgaactcgatttgatttga</cdnaseq>

Protein Sequence

<aaseq>MATGAGATLVSKRSDADFSAGRFSLYVQADGNVVLYLNLAAGNV DPYNAYWATGTNQPGNTQDGNTTLFFASPGRVYYQVKDGTVHDLTTPMAKANYYQRAT LDPDGVVRVYVRRRSPTSSTSTTTANASWAVAGMFPGDGCSMGTRGLDGFCGPNSYCV VSDDGRLDCACPSGYSFVDAQLRYRGCSPAFAPPRCDFVGDDVANRSGEFVIAKLPNT TWTASPYKVYSYTAEEQCGGLCLNDCFCVAALFDGTRCTKMASLTGAGRQGSNVTGKA LIKVRTRSTPPAAAVARRRAPPLPYILLLGFSAFLLLASTTSLVLLHRRIRRRSSSDH DMVMRLFTRKELYDATNGFQRLLGRGGFGEVYHGVANSLHLLHSPDTDIAVKKLIVSN EYTEREFANEVQSIGRIHHRSLVRMIGYCKEREQRMLVFEFMPGGSLRSFLFHQQPRR RPPPPPWTWRAEAALAIAKGIEYLHEGCASPIIHCDIKPDNILLDDKNNPKIADFGIS RLLGDEQLHTTVTNVRGTRGYIAPEWLHGDRRIDTKVDVYSFGVVLLEMICCRRCQDP ITSQLHQDDNGDCDDDTVTLFGWAAGLVSHGRVEVLLRSDDDAAEDLERVERFARVAF WCIVHNPSLRPTIHQVVQMLEGVVEVHAPPHLPSYTDSSSSSFIHTDSPALRPRGSSC PVELDLI</aaseq>

Gene Sequence

<dnaseqindica>487..2556#gtcccgctgcttctgatcgcactgctgctgcatcaatcatcctgtctgcttcaagttgaagcagaaaacctgacggcaggatcgactctgaggcctcctcactacatcaccagcccgtccggcgacttcgccttcggcttccgcgccctcggctccggccgcccggatggctggtttctcctcgccgtttggttcaacgacgccgtacaggagaaggcggtggtatggtacgcgagggacccgggctccgggtcggcggtgacggccacggcgcagtctgtgttcagcgtcaccctcgccggccagctgtcgctcgccgacaccgccggcagcaacgtctggacgaacgcgaacccgggccagcagtacggctccgtgctcgtgctgctcgactctggcaacctccagttcctcgccgccggtggccgcgccgtggtgtgggagagcttcagggacccggccgacacgctcctccctggccagtccatggccaccggagccggagctacgcttgtgtccaagcgctccgatgccgacttctcggctggccgcttcagcctgtacgtgcaggccgacggcaacgtcgtcctgtacctcaacctcgccgccggcaacgtcgacccgtacaacgcgtactgggcgaccggcaccaaccagcccggcaacacccaggacggcaacaccactctcttcttcgcctcgccggggcgcgtctattaccaggtcaaggacgggacggtgcacgacctgacaactcccatggcgaaggcgaactactaccagcgcgcgacgctcgacccggacggcgtcgtccgcgtgtacgtccggcgaaggagcccgacgagctccacttccaccaccaccgccaacgcgtcgtgggccgtcgccggcatgttccccggcgacggctgtagcatggggacccgtggcctggacggtttctgcggccccaactcgtactgcgtcgtgtccgacgacggccggctcgactgtgcgtgcccgagcggatactccttcgtcgacgcgcagctacggtaccgcggctgctcgccggcgttcgcgccgccgaggtgcgacttcgtcggggacgatgtcgccaaccgctccggcgaattcgtgatcgccaagctgcccaacaccacctggacggcctcgccgtacaaggtatactcctacacggcggaggagcagtgcggcggcttgtgcctgaacgactgcttctgcgtggcggcgctgttcgacggaacccgctgcaccaagatggcgtccctcacgggcgccggacggcaggggagtaacgtcacggggaaggcgctgatcaaggttcggacgcgcagtacccctccggcggcggcggtggcgcggaggagggcgccaccgctgccgtacatactcctcctcggtttctcggcgtttctcctgctcgcctctacgaccagcctcgtgctcctgcaccgccgcattagaagaagaagctccagcgaccatgacatggtgatgagactcttcaccaggaaggagctttacgatgccaccaatggtttccagaggttgctaggaagaggtggcttcggcgaggtctaccatggcgtggcgaattcgctgcatctgctgcactcacctgacactgacatcgcggtgaagaagctcatcgtctccaacgagtacaccgagagggagttcgcgaacgaggtgcagtccatcgggaggatccaccaccggagccttgtccgcatgatcggctactgcaaggagcgggagcagcggatgctcgtcttcgagttcatgccggggggctcgctccggagcttcctcttccaccagcagcctcgacgacggccgccgccgccgccatggacctggcgcgccgaggcggcgctcgccatagctaagggcatcgagtacctgcacgaagggtgcgcttcgccgatcatccactgcgacatcaagccggacaacatactgctggatgacaagaacaacccaaagatagccgacttcgggatctccaggctcctcggcgatgagcagctgcacaccacggtgaccaacgtgaggggaaccagagggtacatcgcgcccgagtggctgcacggcgacaggcgcatcgacaccaaggtggacgtgtacagcttcggcgtcgtgctgctggagatgatttgctgcaggagatgccaggacccgatcaccagccagcttcatcaggatgacaatggcgattgcgatgatgacaccgtcactctgttcgggtgggcagccgggctggtcagccatggtagggtggaggtcctcctgcgcagcgacgatgatgcggcggaggatctggagagagtggagcggttcgctcgtgtggctttctggtgtatcgtgcacaatccgtcgctccggccgacgatccatcaagtggtgcagatgctggagggtgtggtcgaggtccacgcgccgcctcatcttccgagctatacggattcatcgtcgtcctcgttcatccatacggattcacctgctctcaggccaagaggctcttcttgtccagtcgaactcgatttgatttgagggcgtaaactaagctagtactgggaggaaaatgtggtaactctcgaatatcttctcagactataaatttcgtaacataggctgtgttagatccatagtctaaagttttggcgtgtcacatcgaatatatagacacacatttaaagtattaaatgtagactaataacaaaattaattacaaaatccacttgtaaactgcgag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0620200, RefSeq:Os06g0620200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0620200&oldid=12261"