Os01g0234900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0234900 |
|---|---|
| Description |
Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2 |
| Version |
NM_001049053.1 GI:115435519 GeneID:4327774 |
| Length |
2748 bp |
| Definition |
Oryza sativa Japonica Group Os01g0234900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:7449916..7452663 |
| Sequence Coding Region |
7450124..7450483,7450617..7451003,7451935..7452231 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:7449916..7452663 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:7449916..7452663 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacgtggacagcgtcgagtgcctgtcgctgccggactcctcctcctcctccggcgccggcgccggcggcggagggggtgggggtgggggtgggggcgtaggcgccatggatgcggcggacgacgtcggcctcgcgctgcacgcgcacggcgcgctcctggcggccgcggcggccgcgcgggcggcggcgtgctccaagggagggggagggggaggcgcggcggccgggagcggcgtgcacgagctgctcgagtgccccgtctgcaccaactccatgtacccgccgatccaccagtgccaaaatggacacactctgtgttccacctgcaaagctagggtgcacaaccgttgccctacatgcagacaagagcttggtgatatcaggtgtttggccctggagaaagtagctgaatcgcttgagcttccctgtaagtactgctctttggggtgcccagagatcttcccatactacagcaagataaaacatgaagcgcagtgcatgtttagaccatacaattgcccttatgctggttctgagtgtgctgtggtgggtgatatcccttatcttgttgcccatttgagggatgatcacaaagttgatatgcatagtggttgcacattcaaccatagatatgtcaagtccaacccacgagaagtcgaaaatgccacctggatgctgacggtcttccactgtttcgggcaatacttctgcctgcactttgaggccttccagcttgggatggcaccagtctatatggcctttctccgtttcatgggtgatgaaaatgaggcaaggaactatagctacagccttgaggtcggcgcaaacggcaggaaaatggtatgggagggcaccccccgaagtgtccgggacagccaccggaaggtgcgggacagccatgatggcctcatcatccagaggaacatggcgctgttcttctcggggggcgaccgaaaggagctgaagctgaggatcaccggccggatctggaaggagcagcagaccccagacggtgcctgcataccaaatctctgtagctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDVDSVECLSLPDSSSSSGAGAGGGGGGGGGGGVGAMDAADDVG LALHAHGALLAAAAAARAAACSKGGGGGGAAAGSGVHELLECPVCTNSMYPPIHQCQN GHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSK IKHEAQCMFRPYNCPYAGSECAVVGDIPYLVAHLRDDHKVDMHSGCTFNHRYVKSNPR EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGA NGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQ QTPDGACIPNLCS</aaseq> |
| Gene Sequence |
<dnaseqindica>2181..2540#1661..2047#433..729#ctcacaaaatttactcgccggaaaacccaaaagaacggaaaagaaaaaaaaagtcaggcagtcgtcgccgtgctcgccgcggcggggtccatcggtgtcgccggcgccaccaccacaacccagacgaggggagacggcatccaggatccagcaataatagcgcgtcgcggtggtcgtcgtcctcacctaatcccccccccccctccccatccatctattctcagccaaaagctcccctcttctctctctccctctccctctcgctttcgtttccctttttacccccgcaatccgcggcgcgccaccgccacaacaaagcccccgctcgccggagcaggagccgccccccccccccggtgcccacccgccgtgccccccaattcctccccgttcgtggcaggcgggggtgcgggcgcgggcgcgggtgcggccatggacgtggacagcgtcgagtgcctgtcgctgccggactcctcctcctcctccggcgccggcgccggcggcggagggggtgggggtgggggtgggggcgtaggcgccatggatgcggcggacgacgtcggcctcgcgctgcacgcgcacggcgcgctcctggcggccgcggcggccgcgcgggcggcggcgtgctccaagggagggggagggggaggcgcggcggccgggagcggcgtgcacgagctgctcgagtgccccgtctgcaccaactccatgtacccgccgatccaccaggtgaggttctcgcttgattccgcgctcgcatacgcgtcgtgtgggatgcgatccgtggggggttcggaaaagagggggggggggggggatctgtgtgcgtctgggcttgggagcctcggaatcggggttgaattttagagcgaaacaaagagaggaaaatgtcgttttcgccatgcctgtcatgatttgattcctcttgtgattggagcatcatatccaattcgatcattgatacaatgatactggcacaatggggggtagacttcctgttggtcgttcagaatttcctgggatcttggtgttctctgggctcccgattggtgttgtgtattcctgaataatttcggtgatctgttctgttattctcgtgcacgaattgctgacttagcttatcgatcggccgattattgttcaattcctgcattatttttctagtaattatagagctcctttttgacatatagtcgatgcctaagaagaagcaggaatgttgaatcttgcgaatgatcaactgttagaattagatggctaatatctattataatctggaatgagctgccaaaataatcatgccttcaggtcattcggtttatctttagcagaatttataaaaaatagtagtacctttaacatttagccatggtgagttttcccttttagcacaagttataaaagggaaggaagacgacggtacttgtgaagtatatatgttgggtagaagtatagaacttaattaacctaaaaatggatcattcgaagatccttagagaatacatgggctgaatttcaataagcaattctaaccatacactccctttcccaattcgttgtgtcagattgatctagtggtgtaaacctgaagagtctcattatgtagttctgaacttctgatctttggatatgattctcatctctttgaatttcattgcagtgccaaaatggacacactctgtgttccacctgcaaagctagggtgcacaaccgttgccctacatgcagacaagagcttggtgatatcaggtgtttggccctggagaaagtagctgaatcgcttgagcttccctgtaagtactgctctttggggtgcccagagatcttcccatactacagcaagataaaacatgaagcgcagtgcatgtttagaccatacaattgcccttatgctggttctgagtgtgctgtggtgggtgatatcccttatcttgttgcccatttgagggatgatcacaaagttgatatgcatagtggttgcacattcaaccatagatatgtcaagtccaacccacgagaagtcgaaaatgccacctggatgctgacggtaagtacctatagactgtggcgctcttgttattcttatttgaactataataccttcgtggtagatataagattatcttgtggaaattgtattatagaaatattgaaacattgaattgctgtcttgtgagtaggtcttccactgtttcgggcaatacttctgcctgcactttgaggccttccagcttgggatggcaccagtctatatggcctttctccgtttcatgggtgatgaaaatgaggcaaggaactatagctacagccttgaggtcggcgcaaacggcaggaaaatggtatgggagggcaccccccgaagtgtccgggacagccaccggaaggtgcgggacagccatgatggcctcatcatccagaggaacatggcgctgttcttctcggggggcgaccgaaaggagctgaagctgaggatcaccggccggatctggaaggagcagcagaccccagacggtgcctgcataccaaatctctgtagctaagcaatcacaacattcagaagaaacaaagaaactcaactccactttgcggccggataacatctatcccgttgccatgtcttactgtttttttgtatgctccgaggcaacgccttcatgttgtacctttgctaaacaaacattaggagggtaggacgctcttgtaaagtaaaatgtgtgtatatggcaccccatatcttacaggttggct</dnaseqindica> |
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