Os01g0243200

From RiceWiki
Revision as of 18:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0243200

Description

Biopterin transport-related protein BT1 family protein

Version

NM_001049097.1 GI:115435607 GeneID:4327703

Length

5586 bp

Definition

Oryza sativa Japonica Group Os01g0243200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7893945..7899530

Sequence Coding Region

7894234..7894495,7895113..7895250,7896029..7896226,7896314..7896766,7896857..7897098

Expression

GEO Profiles:Os01g0243200

Genome Context

<gbrowseImage1> name=NC_008394:7893945..7899530 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7893945..7899530 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatctttgtgcctgcaggattttgtcagactgtattcccatcaagcagaggaagcgtacgccctatttgatcatttctagctgtctatctctatttccgtggctaatccttgggatgtcagaacctttgaggagctcaagcaattttcttactgctttgctgatagtacagaacttgggatctgccatggcagatgttgttatagatgcaatgattgcagaagcagttcgatcagctgggccagaatttgctggtgatctccagtcactatcttggtcatcaatggcagtaggggggatttttgggagcttattggggggatatgcactgtccaatctccctatacatgttatatatattattttctcggcgcttccattgtttcaactaatttcctgcatatttgttgaggaatctccaaaaggatttgagagtagaatggataatgctgcacctaaacatgtcgaggatcaaactattgatgcttctcccggaaaaagctctagtgaatcatataaatatgaagatactagaaggcgaaaaggagctaggagaaataataaaaggaaatcattgtccaaacgacctgaggaccatgacaagaacaagtcaactaacttaaggccatacttgtctctgaaatcagcattcttcagtttatgcacagcattcaaacaaccaactattttacgacctatggcgtggtttttcttttcgaatgtagcaattccaaatatctcaacagtcatgttctactatcaaacagaggtcctacatttggaggcatcctttctggggactgcacgtgtaattgggtggttcagtctaatgcttggcacatatatctacaaccgctattttaaacacaagaaactcaggaatattctcatgtttgcacatgttggtcttgccataattggcgtactggacattcttttggtgttgcggttacatgttcactatggaattacagacaaatacatggtcttgtggggttctgctttggctgatgcaattaaccagttcaagatgatgccgttcctcatcctctctgggcagctttgccctcctggaatcgagggaacactgttcgctctgttcatgtccatcaacaactttggctcgactttaggctcattcttgggagcggctctggcgtcagctttaagcatctcatcagcacaattcgacaatctggcgctcggcttaggtgtacagctgattggcactctcctaccggttggatttttgtttctgataccaaaggaagttacagggctaacgtcatag</cdnaseq>

Protein Sequence

<aaseq>MHLCACRILSDCIPIKQRKRTPYLIISSCLSLFPWLILGMSEPL RSSSNFLTALLIVQNLGSAMADVVIDAMIAEAVRSAGPEFAGDLQSLSWSSMAVGGIF GSLLGGYALSNLPIHVIYIIFSALPLFQLISCIFVEESPKGFESRMDNAAPKHVEDQT IDASPGKSSSESYKYEDTRRRKGARRNNKRKSLSKRPEDHDKNKSTNLRPYLSLKSAF FSLCTAFKQPTILRPMAWFFFSNVAIPNISTVMFYYQTEVLHLEASFLGTARVIGWFS LMLGTYIYNRYFKHKKLRNILMFAHVGLAIIGVLDILLVLRLHVHYGITDKYMVLWGS ALADAINQFKMMPFLILSGQLCPPGIEGTLFALFMSINNFGSTLGSFLGAALASALSI SSAQFDNLALGLGVQLIGTLLPVGFLFLIPKEVTGLTS</aaseq>

Gene Sequence

<dnaseqindica>5036..5297#4281..4418#3305..3502#2765..3217#2433..2674#agcttccacctcctgatccacccgaaccctagaatccactgcgacgagcagctgaggaagaggaggaggaggaggaggcgttctcctgggaggggaccccgtcccgcccgtttccgccatggcggcggcggcggcttcgtcctcctcctcgccgtgggcggggcggatggcggcggcgttcggggcgccgttcctgtggctcgtctgcctgatctacttcatccaggttccgcttccccctccccctctccgcgcccaccatttcctgcgacgcgattgatccccgattcttttggaacgctctccgttcgttcgatcgttcgttagataagagttacgcggcttcctgggaggagtgacgacagctgtccgaaaacctcgcgtttggatccatcagcaaacgcggagcggaggcgagatgccagacgagtttgagatcgacatgtggtagtgtggtacatccgtgtgcaagaggccgaactggtcgctgtctgtatagagatcgaggagtgcttataggaatttgggttcggatgattacatggtccttttgcttccttcgcttttgtaaggcaatcttggattgtttttgccaggtcaaatcgtgctctctgtgtaggatgatattatggattgcttcttgtgtcttgggtttgcctaaataagtaattatgtcattcattttaagaattggaggtctgatggctgcatgaacacatttttcttttaaatatgaaatcgaaggtagttcatttgtgatccgttgtaaggattggaactcatttagggcattaggagggtagagttatttctatgatagatgactcaatatgtttcatactagatttaactggttggttggtgtgcagacttaggtagtgaaagtttctctaaaaagagcttaatgttgatggagaatctcagatttgtgaaactatggaatgctatacgagttcagcttcggactgtaatgtctgaaaacagcctagtgtgataatttcacaattatagcaaggattggtggtatgtcatatgtcttagcatgacatgcaatgggatggggaccaaatttgtttatttgtgttgtgagctcatgtgccatgctttggtgatatgtcaaatgttagcatgttcaattagttgtaaattccttgtctcaatcagaactcttcaagataaactgtattttgtagtagagctaactaaatataaagaaggcagttttggtttaccgaagcttattttcgccattagttgaaagcttaacaaagcactacaccttttactttgatagattttaatatttattctgcaattctttagggtttcaggtcttttgtctggacagctgtctcgtaccaaatgaaggacatgatgaaactgtcaccatcaacatcacagtttttggtctcagttgcatatttcccttggagtataaagcctgtatatgggtaatgttacttctgtttgcttctgctgtgaactgaaatttaatcatgttccctacaacctaattatgttttttttgctacagagtagtttttgtaatgtactgtttcaaacatcatgtgccttacacagttacaccttagtttcagaaatcttacatgtaattatacttcttacaacaacagagtttccctgacatgtttactgtggcttatctctattgcaagtgattaaagtgtagttgcttacaaacagatgggtgctcaatatttcctgagcaagcaacaattattacttactgccttcggacaatttgtcaattatgacaattataaatattcttttgtagcataagagctaaacaatttgtcaattttatatttactgccttcacacagattaacacgattaattctaaaggatgtttctgaatagggtatatatcaactaattttggaaattattttactttagtggaaaatggattaatatgtgcactgcatttggagacccgacagtaaatgtgaaaaggcaaaaggaagtgctgcaagcactccaacatcgatgggtatttttttctgttggatcgcttagttttcctcatgcatttatacccactcaaatgtttgctgcatacttgctgtggagctgtgcattatggcattatgtaacagatagtcctgtgtaacattaaaatcacaggtcttagaaatttcttctatgttgaattgcacggcttgtcggcttctgagcactggctgcccattactgtaaaacatctatatgcgtttgtgtataactataatgagtttcagattgtactgtacaaaatccagatactcgttacttccggatgagtctcctctgactacgtcagagggactttgtcactgacatgtgggacccacaaaggttgggcccacacatcagtgacccacgtccctctaactttacgtcagaggagcgcgatccgttacttacacatgcatctttgtgcctgcaggattttgtcagactgtattcccatcaagcagaggaagcgtacgccctatttgatcatttctagctgtctatctctatttccgtggctaatccttgggatgtcagaacctttgaggagctcaagcaattttcttactgctttgctgatagtacagaacttgggatctgccatggcagatgttgttatagatgcaatgattgcagaagcagttcgatcagctgggtgagtatcttagtgtaatattttcactggttagcaactactatatgattacagattatctgaactcaaaacttgactatatttttccaggccagaatttgctggtgatctccagtcactatcttggtcatcaatggcagtaggggggatttttgggagcttattggggggatatgcactgtccaatctccctatacatgttatatatattattttctcggcgcttccattgtttcaactaatttcctgcatatttgttgaggaatctccaaaaggatttgagagtagaatggataatgctgcacctaaacatgtcgaggatcaaactattgatgcttctcccggaaaaagctctagtgaatcatataaatatgaagatactagaaggcgaaaaggagctaggagaaataataaaaggaaatcattgtccaaacgacctgaggaccatgacaagaacaagtcaactaacttaaggccatacttgtctctgaaatcagcattcttcagtttatgcacagcattcaaacaaccaactattttacggtaactaatcatgttatgatttcatttcctcttatgtttacccctgtcactgaagagactaattgatatcttctttttacctgccagacctatggcgtggtttttcttttcgaatgtagcaattccaaatatctcaacagtcatgttctactatcaaacagaggtcctacatttggaggcatcctttctggggactgcacgtgtaattgggtggttcagtctaatgcttggcacatatatctacaaccgctattttaaacacaagaaactcaggaatattctcatgtaagttattttttatataaatgcaaaaccatatgcattactggcacgtgttaggaagttgaaatgttgacatatatatgcttagtgtactcactgagaattgctattggataatttgctaagtttatcgaaggaagaattaccaacctcctccctaaaatctgataccctctttgtttgctttctccaaacaatgggctgttttggattagtgccaaaaacgtgccctaccaatactttggtagtttgaacagtgtatctggtgattttggtttgaagccaaatcattggcattgccaatgcccaatttgatattttctatattctactcaatgcttggttctaaattggcctcaaaccaaatacaactctaccctaccaaaaaattggtagtaccaaaacttgcctaggttttggcactaccaacattttggtagggtattgaaccaaacaagcccaatgtgcaccttaaataaccccaggagagagaagtgtttaaggtgcactaaacatatgaaaacagaatgcatgctggattatttccatttgcgtgagcatcagaattcatgagggatacattatgccattgtcagttaccttttgttctgtgctttggcccagttaacaactacgtgtgcacatgctgtatgatcttttatcctgttacaaaatgcatatataattctttatgagccattagctacaatacaaatatgtttttacttacttaaagccttcatatttattacttttaacatttgctgttcttatcccgcaggtttgcacatgttggtcttgccataattggcgtactggacattcttttggtgttgcggttacatgttcactatggaattacagacaaatacatggtcttgtggggttctgctttggctgatgcaattaaccagttcaagtatatactttggcctccatttttttaatcacaatatctattgcttaattgataacaagcccttgcagtgtttcgagaaccagttgtagattggtttctgctatttgacttgggtcttattgtgctttggttaggcaccattctgaaactagcctatttccacaatatctggataagaaattacataaccttaataatattcagatgaacatattagtaaaatggcaggtcatgaacttcatatgactaactgtgacctcatcattaattgtcctccatctgtgcattttacttcaaattgagaaaaatgctctttattatctagtaagatcacacctattaccataaatagttagtactggtttagtcacatcgaaatattgttgttttattaccaagtcaacactaaaacaaacatgtgaaattaatctttcaatttagggcttgtgatacaattatgggcatcactattggtgtttaccgtttgttgtcttcagttttgtaaattacaatctcatctgactctctttatttccatctgttattcttgtgcccctccttttatgaaaaatataaatcagaatacaatttctgaaaagaatattctcatttgtcaggatgatgccgttcctcatcctctctgggcagctttgccctcctggaatcgagggaacactgttcgctctgttcatgtccatcaacaactttggctcgactttaggctcattcttgggagcggctctggcgtcagctttaagcatctcatcagcacaattcgacaatctggcgctcggcttaggtgtacagctgattggcactctcctaccggttggatttttgtttctgataccaaaggaagttacagggctaacgtcataggaagagggatacacatacctgaccatcattttcttttttccggattggtttgcagtcttaagtgctggagtaattcagaacagaaaaattaaaggtagcatgatgaaggtactaaggtagtcaattctgttgaaagatgtatacatgaatacactagagtgaggaagaatacaaatagacagtagatggtaggcattgccaagagttgagcaaaggttatgtacctgcgtaatgtactacagtggaagtgacattttttccccggagaaattgacattactgacattgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0243200, RefSeq:Os01g0243200