Os01g0245700

From RiceWiki
Revision as of 18:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0245700

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001185325.1 GI:297719784 GeneID:9268192

Length

2934 bp

Definition

Oryza sativa Japonica Group Os01g0245700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8031129..8034062

Sequence Coding Region

8031129..8031155,8031862..8031988,8032109..8032233,8032477..8032502,8032799..8034062

Expression

GEO Profiles:Os01g0245700

Genome Context

<gbrowseImage1> name=NC_008394:8031129..8034062 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8031129..8034062 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatagcccgcacctgttcgacggcgcggcgcccaagttccggcgggacgagaggatggcggcgccgccgcgggaggccacgtgggtgatcctggcctgcgtcccgagcgtgtcctcttccgacagcgacttcgaggccggcgaccaccttgccttcgactggcgcgacccgccgggcgtctccctcctcaccttgcgccagagcgactctgtccctgtctcccccgcgcctcgggatttctgccccgaccgcgacgaccacccctacgtcgtcgccgtcgactccgccggcggactcctgctccgcggcgccaggaggagcgcccacgatttcggccccggcgtcgcgctcggattcgaccctgcaccgagctgcaccaacgacggcggctacatcctctgccacgctacgctccgcatggcctacctctacccgccctgctccgacgagtaccggctcctctgcgccgggaacgtcggcatgatccgcagaacggcggatcgcgaccacccgatccgcttgttggccgagctccagatagagtccggcaatggcatccaccgcgccaccctactacgctactcccatgagctcggagggtgggcttcaacaaaggtcaactacccgccaggccgccggtcgtggtgcggcgacggcgtcatcgtccacgccgggatgctctggtgggtggacctctccttcggcctcctcacctgcgacgtgttcgccgcgaagccagacatgcgcttcgtgccgctccctgagggatgcaagctaccgtactccagcgacgcggaccacgccaagcaccggtgcgtgaacgtgagcgacggcgagctggcgttcgtgcagatccacgactacgacaccgccgccggccgcggcgcgccatcgacgatcatgatcagcatgtggacgctgcagcagtctgatgcgggggaggagtcggtttggtcgctccgccaccgggtgcgcgtcgacgagatctgggaccacgtgacataccggaagaccatgatgccgcggcgcgttccggtgctcgcgctcctccaccccaaggagctcggcgtggtgttcttcttccagatcacctcgcggaactcgtggatgttcgccgtcgacctggtcaccagaatcgtgctcgagtgcaagaagtacaagatgccccagctgccgacgatgtaccactcctctcgccacgtccgcgcttgggagctgccacattcgatctgccgcggagaggatgatgagacagatgtaatgctgtatgttggccatgtatctaatctgacggatgagcttgacttgaacttttcgagtgacaaagctgacgaactgctgtcaaccactggaaggctcttcatcaatccaaggttccaggaactgaggaatgccactgcttttcctaagtacttgtcatttgtcattgtcaaggctactgacgcatatgaggcattgtgtctgatgcgaaacttcgtgtcacatgtctccatggacggttcaaacatagttcctcgagtttcagctgaaagtattggacctaaggatcttatgcttggttga</cdnaseq>

Protein Sequence

<aaseq>MEHSPHLFDGAAPKFRRDERMAAPPREATWVILACVPSVSSSDS DFEAGDHLAFDWRDPPGVSLLTLRQSDSVPVSPAPRDFCPDRDDHPYVVAVDSAGGLL LRGARRSAHDFGPGVALGFDPAPSCTNDGGYILCHATLRMAYLYPPCSDEYRLLCAGN VGMIRRTADRDHPIRLLAELQIESGNGIHRATLLRYSHELGGWASTKVNYPPGRRSWC GDGVIVHAGMLWWVDLSFGLLTCDVFAAKPDMRFVPLPEGCKLPYSSDADHAKHRCVN VSDGELAFVQIHDYDTAAGRGAPSTIMISMWTLQQSDAGEESVWSLRHRVRVDEIWDH VTYRKTMMPRRVPVLALLHPKELGVVFFFQITSRNSWMFAVDLVTRIVLECKKYKMPQ LPTMYHSSRHVRAWELPHSICRGEDDETDVMLYVGHVSNLTDELDLNFSSDKADELLS TTGRLFINPRFQELRNATAFPKYLSFVIVKATDAYEALCLMRNFVSHVSMDGSNIVPR VSAESIGPKDLMLG</aaseq>

Gene Sequence

<dnaseqindica>2908..2934#2075..2201#1830..1954#1561..1586#1..1264#atggagcatagcccgcacctgttcgacggcgcggcgcccaagttccggcgggacgagaggatggcggcgccgccgcgggaggccacgtgggtgatcctggcctgcgtcccgagcgtgtcctcttccgacagcgacttcgaggccggcgaccaccttgccttcgactggcgcgacccgccgggcgtctccctcctcaccttgcgccagagcgactctgtccctgtctcccccgcgcctcgggatttctgccccgaccgcgacgaccacccctacgtcgtcgccgtcgactccgccggcggactcctgctccgcggcgccaggaggagcgcccacgatttcggccccggcgtcgcgctcggattcgaccctgcaccgagctgcaccaacgacggcggctacatcctctgccacgctacgctccgcatggcctacctctacccgccctgctccgacgagtaccggctcctctgcgccgggaacgtcggcatgatccgcagaacggcggatcgcgaccacccgatccgcttgttggccgagctccagatagagtccggcaatggcatccaccgcgccaccctactacgctactcccatgagctcggagggtgggcttcaacaaaggtcaactacccgccaggccgccggtcgtggtgcggcgacggcgtcatcgtccacgccgggatgctctggtgggtggacctctccttcggcctcctcacctgcgacgtgttcgccgcgaagccagacatgcgcttcgtgccgctccctgagggatgcaagctaccgtactccagcgacgcggaccacgccaagcaccggtgcgtgaacgtgagcgacggcgagctggcgttcgtgcagatccacgactacgacaccgccgccggccgcggcgcgccatcgacgatcatgatcagcatgtggacgctgcagcagtctgatgcgggggaggagtcggtttggtcgctccgccaccgggtgcgcgtcgacgagatctgggaccacgtgacataccggaagaccatgatgccgcggcgcgttccggtgctcgcgctcctccaccccaaggagctcggcgtggtgttcttcttccagatcacctcgcggaactcgtggatgttcgccgtcgacctggtcaccagaatcgtgctcgagtgcaagaagtacaagatgccccagctgccgacgatgtaccactcctctcgccacgtccgcgcttgggagctgccacattcgatctgccgcggagaggatgatgagacagatggtacgtacgctgcgctgttcttcacttctttgctctgtctcatcgctgcatgctgatgtgctttgtccatttgtgctattcatgtttgagttattttgatgctgggcatggtctgcacatctcatttggccggttcatgattaatcctgcacaccagagggtgcatctaatctagcagatacagatttgcactgtatagttcttttgacattgtaaattaatgggaatcgatcaaggactatatgtgaatttgcatgtttagtaccttctacattttagtagttacaatgttgtagtaatgctgtatgttggccatgtatctgtatgtcatttaacactacggaatacttatagaatatattccataacagcaacttcgtttgtttgtattaatgaccctgaagtctgaaaatcactgagtataatatagacatatatttactggtgcatgtactgttgcatctttagcttctggaaaaaaatacataagctaagttcctatcaagttattgaacacaggtttaccattttttgactaactagaattgcttgtgttaatttgcagaatctgacggatgagcttgacttgaacttttcgagtgacaaagctgacgaactgctgtcaaccactggaaggctcttcatcaatccaaggttccaggaactgaggaatgccactgcttttcctaagtgagcctctttccatcctctttggatcgccgaccacttcaattcacatgcactcgcatacaagagagaattttcttcactgaacctcatgtgtgtgttatcttctttttcattcatcaggtacttgtcatttgtcattgtcaaggctactgacgcatatgaggcattgtgtctgatgcgaaacttcgtgtcacatgtctccatggacggttcaaacatagttcctcgagtttcagctgaaagtattgtatgaatagttcagtgttgagtttcagatgaaagttttgtttggaaatcttgtttcttctccctgcttcctctgtttgacatatccacggtactaggcagttgagaaaccaaacaccctgactgatgttggacagtgtctttaattagatatctggcttaactctctgctatcttacacaaccagtgtttgttaattggtggatggctgatgacattgttcgtgatggtacactgagttctaattctcgtatattcgatggatgattgtttacatttccgaactagcacgtggttgagaatttaaattttggatctgtgaattcttatctttactatcactgctatacgtgcgtacagagttttaatactgtgtatcagtgaataaatgttcaggctaactcttcagttttagtttgctctgctcctccttttgctgaacctgctagaaccatacaatgacgattagtatagtacagaacaattaggatcaattagttatctcagttaccaattacagaacgtccgaaccacggtttagagcagccaaagaacaattctagcaaatttttgagacatagaaaagaacaattgtaccttaacataatagtaaaacacaacattgatcctattttcttgatattgcaaaattaattgtacattcgcaacgtaataccatggaacaacaatgtacattgtacacgtagggacctaaggatcttatgcttggttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0245700, RefSeq:Os01g0245700