Os06g0624700

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0624700| Description = Protein of unknown function DUF23 family protein| Version = NM_001064642.1 GI:115469015 GeneID:4341563| Length = 242...")
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Gene Name

Os06g0624700

Description

Protein of unknown function DUF23 family protein

Version

NM_001064642.1 GI:115469015 GeneID:4341563

Length

2422 bp

Definition

Oryza sativa Japonica Group Os06g0624700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26022597..26025018

Sequence Coding Region

26022629..26022743,26022843..26023851,26024329..26024674

Expression

GEO Profiles:Os06g0624700

Genome Context

<gbrowseImage1> name=NC_008399:26022597..26025018 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26022597..26025018 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggaaggacgcggccgctggcggcggcggcggcggcggcattgcggccgggccggcgcccgcgctcctctgcttcgacctcaagccgttcctcgccgcgctcaccgtgctcacgctcgccgtgcgcaccgtggcgtcgagcggcaatgcgagtgtctcctccgaccctggtgggccgcccgcctcgctgccggaggtggggaacaagaagccggtggcggcggcggcggcggccgatcccaacaggcgggagttccgcgcggtgggcagcgcggcggcgctgttcgtccagatgggcgcgtaccgcggcgggccgtacaccttcgccgtcatcggcctcgcgtcgaagccgacgcacgtgtatggcaagccgtggttccgctgcgagtgggtgccgaacgccaatggctcggcggcggcggcggcggcgcggccgatgcgcgccgcgaacacgtaccacatgctcccggactggggctacggccgggtgtacaccgtcgtggtggtgaactgcacgttcgcgcgggtgcccaacgccgacaacgccggcgggaagctcgtgctgaacgcctactacggcgcctccccggcgcggtacgagcggatcgtggcgatggaggaggcgccgggcgcgtacgacgcggccgagttccggccgccgcacaggtacgactacctctactgcggctcgtcgctgtacgggaacctcagcgcggcgcgcgtgcgggagtggatggcgtaccacgcgcgcttcttcggcctgcgctcccacttcgtcttccacgacgccggcggcgtgagccccgccgtgcgcgccgcgctggagccgtgggtgcgcgccggccgcgccacgctgcaggacgtgcgcgcccaggccgagtacgacggctggtactacaaccagttcctcgtcgtcaacgactgcctgcaccggtacaggcacgccgccaggtggaccttcttcttcgacgtcgacgagtacatcttcttgcccgacgggcgctcgctcgaggccgtcctcgccgagctcgagccctacacgcagttcaccatcgagcagaaccccatgtcgagcaggttatgtgcacggaaccccgacgaaccggagacggactactcaaatgaatggggatttgagaagttggttttccggaattcaatcactggggtaaggcgtgaccggaagtatgcaattcaggccaagaatgcatatgctactggagttcatatgtcggagaatgttatcgggaacaccacgcacaaaacggagcacctcatccgatactaccactaccacaataccatcaatgtgattggcgaggtatgccgcgagtttgtgcccattccacccaatggtggattaatctggtccgagaagacgccctggtactacgatgacagcatgaagcgcatagccgacacagtgcgggaattcgagaggaagaccattggtgatgtgcgagtgtga</cdnaseq>

Protein Sequence

<aaseq>MRKDAAAGGGGGGGIAAGPAPALLCFDLKPFLAALTVLTLAVRT VASSGNASVSSDPGGPPASLPEVGNKKPVAAAAAADPNRREFRAVGSAAALFVQMGAY RGGPYTFAVIGLASKPTHVYGKPWFRCEWVPNANGSAAAAAARPMRAANTYHMLPDWG YGRVYTVVVVNCTFARVPNADNAGGKLVLNAYYGASPARYERIVAMEEAPGAYDAAEF RPPHRYDYLYCGSSLYGNLSAARVREWMAYHARFFGLRSHFVFHDAGGVSPAVRAALE PWVRAGRATLQDVRAQAEYDGWYYNQFLVVNDCLHRYRHAARWTFFFDVDEYIFLPDG RSLEAVLAELEPYTQFTIEQNPMSSRLCARNPDEPETDYSNEWGFEKLVFRNSITGVR RDRKYAIQAKNAYATGVHMSENVIGNTTHKTEHLIRYYHYHNTINVIGEVCREFVPIP PNGGLIWSEKTPWYYDDSMKRIADTVREFERKTIGDVRV</aaseq>

Gene Sequence

<dnaseqindica>33..147#247..1255#1733..2078#actctcgctcgctagcttgggcggcggcgaggatgcggaaggacgcggccgctggcggcggcggcggcggcggcattgcggccgggccggcgcccgcgctcctctgcttcgacctcaagccgttcctcgccgcgctcaccgtgctcacgctcatcaccgccgcgtggcagctccgctcctacagctccgtcctcccttccccattccccgtctgcgccgacccggccgcgctctcgccgccccgcgcgctcgccgtgcgcaccgtggcgtcgagcggcaatgcgagtgtctcctccgaccctggtgggccgcccgcctcgctgccggaggtggggaacaagaagccggtggcggcggcggcggcggccgatcccaacaggcgggagttccgcgcggtgggcagcgcggcggcgctgttcgtccagatgggcgcgtaccgcggcgggccgtacaccttcgccgtcatcggcctcgcgtcgaagccgacgcacgtgtatggcaagccgtggttccgctgcgagtgggtgccgaacgccaatggctcggcggcggcggcggcggcgcggccgatgcgcgccgcgaacacgtaccacatgctcccggactggggctacggccgggtgtacaccgtcgtggtggtgaactgcacgttcgcgcgggtgcccaacgccgacaacgccggcgggaagctcgtgctgaacgcctactacggcgcctccccggcgcggtacgagcggatcgtggcgatggaggaggcgccgggcgcgtacgacgcggccgagttccggccgccgcacaggtacgactacctctactgcggctcgtcgctgtacgggaacctcagcgcggcgcgcgtgcgggagtggatggcgtaccacgcgcgcttcttcggcctgcgctcccacttcgtcttccacgacgccggcggcgtgagccccgccgtgcgcgccgcgctggagccgtgggtgcgcgccggccgcgccacgctgcaggacgtgcgcgcccaggccgagtacgacggctggtactacaaccagttcctcgtcgtcaacgactgcctgcaccggtacaggcacgccgccaggtggaccttcttcttcgacgtcgacgagtacatcttcttgcccgacgggcgctcgctcgaggccgtcctcgccgagctcgagccctacacgcagttcaccatcgagcagaaccccatgtcgagcaggttatgtgcacggaaccccgacgaaccggagacggactactcaaagtaggtgacaattttcttcgcccaaaatatgttcttttgctgaaaagattgcctcttttactttcataaacattgcattattcaaaattgctatagtttgaactggaattgtcaaattaggaagttggattgcaatgctgcttctttttccattgtttactgaccaaaagggccaagtagggattactcctgaaatctctgtgtcgttggaatggcacactaatgcaagcgaactggggcctgaatcttgcaaattgcaatgcagcttcttctttgtggtttgcgttttgagttgacaacgaatcataagtgataaaatggatatttgatgtcatgtttaattaatgtaggatacttctcgcaatgtcgctgctgcatcctgcaatgtgttttacagtcttggttgcattgcttttgtaacatttggctatggttattcttggaagactaatttttcttttctgaaaacttgttcagtgaatggggatttgagaagttggttttccggaattcaatcactggggtaaggcgtgaccggaagtatgcaattcaggccaagaatgcatatgctactggagttcatatgtcggagaatgttatcgggaacaccacgcacaaaacggagcacctcatccgatactaccactaccacaataccatcaatgtgattggcgaggtatgccgcgagtttgtgcccattccacccaatggtggattaatctggtccgagaagacgccctggtactacgatgacagcatgaagcgcatagccgacacagtgcgggaattcgagaggaagaccattggtgatgtgcgagtgtgaatgtgccatgatcgaccaccagagaatgaacagatgtatagtattgctgctgtccactcgtgaggattagcaacggcatgatgtgatcagctgaacagataacctatgatttggacccctctgagctgacagagatgtgaattaaaagtgaagctgcaaccccaaacgaatggatgtttatgcgccactacaattcagtttctgcaaaggtgaagattttgtaaacagacatctcatcactgtaaatctcattgttttatttatgatatataaagtgtattccattcactcaaagatacaatcgcataagaaatttatatgacgacagacttggttcattatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0624700, RefSeq:Os06g0624700