Os06g0624900

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0624900| Description = Conserved hypothetical protein| Version = NM_001187981.1 GI:297725092 GeneID:9268257| Length = 6161 bp| Definition ...")
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Gene Name

Os06g0624900

Description

Conserved hypothetical protein

Version

NM_001187981.1 GI:297725092 GeneID:9268257

Length

6161 bp

Definition

Oryza sativa Japonica Group Os06g0624900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26035372..26041532

Sequence Coding Region

26035937..26036198,26036298..26036513,26040451..26040803

Expression

GEO Profiles:Os06g0624900

Genome Context

<gbrowseImage1> name=NC_008399:26035372..26041532 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26035372..26041532 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgtggtgcaggtgatggtggggatgatggagacgagcccggacgacggcggtggcggcgaggcgatggcggcggcgcagcagacggaggaggacatggggccaccgtggctgcggccgctgctgtcgacgagcttctttgtggcgtgcgcgtcgcacccggagctgagcaagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactgcctccccgcccaccgcgaccaccacgtcgtccagattcggaggtcgtcgtaccacaacgtgatcagggtgtcggaggtggggaagctgatcgacatatcgcacgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggcgaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactccttccgcttctgctccctcggctgcaagctgggaggaatgcggtgggacccaagcctgacattcgccatccggccgaagcgcgggcaggactccggcgacggcggctccggctccgactacgactccttcagccccaagaaggcgaggagggcggcggccggctacgatcagctcggccggttcgaccggggcatgatccggtggtccgacgacgagggcagcaagtccaacacggcgccgatcacgccgaccacgccgccgatcagccggtgccggccgtcgaggaggaagggcatcccccaccgtgcacccttctacggttagctcacacactacaccaaccaaaaaaaaaattatcacccatcaccagcatatactag</cdnaseq>

Protein Sequence

<aaseq>RGAGDGGDDGDEPGRRRWRRGDGGGAADGGGHGATVAAAAAVDE LLCGVRVAPGAEQERVQPLLPRLHRRRPLRLLPPRPPRPPRRPDSEVVVPQRDQGVGG GEADRHIARADVRDQQRQDRVPQRPPAGEAREGRHQHLRDLLPQPPRLLPLLLPRLQA GRNAVGPKPDIRHPAEARAGLRRRRLRLRLRLLQPQEGEEGGGRLRSARPVRPGHDPV VRRRGQQVQHGADHADHAADQPVPAVEEEGHPPPCTLLRLAHTLHQPKKKLSPITSIY </aaseq>

Gene Sequence

<dnaseqindica>566..827#927..1142#5080..5432#aatatctacggacacatccatccattttttttccctcctcttctcatcaatcaacttcttctttcttcgtgttcttcagctctgctagctactaaccctcggagcaggtaacaatttaatctcgttaaatagtgggtgttaattaacccggggaagggggcccgggcaactctcaatccggccatcacatcatggatactgcttcttcctcctccctgttgctgcattcatctcgcaccatcgtagacgacgaccctttcagttgaattcattattattgcaagattgatttcttctttgttttttctttatcctcttttgctttagcttcgatagctagcttagctgcttgaattggtgtttgtttcaactctctgaagctctctggaagaacgggcggcggcggcggggtatatcatggtaagatttagaattgtgttctttgaaatcttgattggtatatggtctagttgcattttaaaaaaaagtttaattagaggttaatttgggcgtgatgtgatgtgatgtaatttgtttgtgtgttgtgtgtttgggttcatggagacgtggtgcaggtgatggtggggatgatggagacgagcccggacgacggcggtggcggcgaggcgatggcggcggcgcagcagacggaggaggacatggggccaccgtggctgcggccgctgctgtcgacgagcttctttgtggcgtgcgcgtcgcacccggagctgagcaagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactgcctccccgcccaccgcgaccaccacgtcgtccaggtaataaccatctagtcttcttcttcctcgtctccggcgagacgattttgaacaattgaatcgaatgaatttgtggttgtgattgcgattgaatggcagattcggaggtcgtcgtaccacaacgtgatcagggtgtcggaggtggggaagctgatcgacatatcgcacgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggcgaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactccttccgcttctgctccctcggctgcaaggtacccctagctagctaccttctctctctaacactctctatcttcttcttctttcttctttctctctctagctagctaccctacacctcgatctctgtcgtccatggcatctgtgagtgggggccatggccacctggtggtgctgcaatgcatgtacactctgtccacactaccatgtagaatcgttaattacaaacgcggttgctgtgatgtgagaattgagaaagtggccggaatatataaccaaattgccttttggcacacataaccaactaaactaactacaattgccttttgcacacttaactaactaaactaactagcggcggcggcggcggctgccggagatcggtgaatcggccggcgaccggctagctgcattggccggcaactgagctgaagaggggcagggaccatgctgatgcaggaagaggcatatacacacacacacacacaacatgacatgcacattgacactgttggtctgttgcattgcagttgcaccatgtatgtatgttgcgtctgcacttgagctaggtgtagtggtggcgacttcttggggactctttggagtggcacagtacattatagtacattgggatgtgtcagcaaagcatatcataggtagggtttgactctgggtttatttaggtctctggaagtgtcattagcaaacatgacagcccagggggggtatgtatatctacttctttgaaaaattagttggttaggatgataactggtactacctccgtcccaaaataagtgcagccgtggatatccgtgcctaacgtttgaccgtccgttttatttgaaaaatttgtgaaaaatttaaaaatatttagtcacacataaagtattattcatgttttatcatctaatagcaataaaaatactaatcataaaaaaatttcaaataaaacaaacagttaaacatttaatgtgaatagtgcaaaactgcacttattttgggacggagggagtagaccacatttgctctggcattctggcaattgactttttgagctgacaaaactaaggttatcaatcaggtttatgatacagcaaaatgtgcaaaaccagggcttgcttgcactgtaatgcaagtttattaggaaatcactgattaattctctttttatctccttttgcacttgaagggtgcaacaagctaatgagacattctccatggaatcggtaggtcccaattattgccctctgaaaattggggcgtgttggtacgtgtgcagccgttgaatgcagctaaaatggggccccgtatctatctcctattcttaggcttagcccattgtacgtccatttccatcaagactgcttctgctgctgctgcaaatagatcaagccagccatatatggaagattatgcatttagtatataacttaattgccagaaaagagtgcatttagtagaggattgtatatgtacttcatctccaaatcatggtttacttaattaattagccttttaaccatagtacgtcctacatttagcatgggttgattcgtcaatcacccaatcattaaaattttaaaaattatatatttgaaagctatgtgttttgcttatccgtttgattgcaaattgctgcaatggggattcgtcaatcacccggtcattaaaattttaaaaattatatatttgaaagctatgtgttttgcttatccgtttgattgcaattgctgcaatggggattatataaaaaaaaagtggccccctagctacaagttgaagctaaagtactgtttttgtttaggacaaggctgctttcaggtagtaggtagacttgagacatcatagccggatcttccagcgataatacatttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccttcttcttcttcttcttcttcttctttcgtagaatgcattgtatatccagtttacctctcctcttttttcctatgaaaaagaaagaaagtaagagggaaagcgtgtgcgttatccagataaagttgaccttgccttggaggtgatgttctaccgaatcaccatgtcgtgtgcttgtctgggtttctgtgtttgtttttagctttgattattggatatatggtgatgactgttgcaaattcaactgatctttgtgaggttttgcaaaatgggaattgttgcttcctttatctgaaaatacggaaaatggcaatggagagtgacttctccctaactttctttcatcttctccctaacttggggatcctacattttcatcaggaacctctacttcttagtctgtatcatttccgtcaatttgttacgaaatcaattctatctcaaataagaactagcaatctaaccatggagaacaatgcatgcaaaacaattctaaactctagatcgaggggactttcccgcgttgtgtgtttgtcagttatgaaaacatttgaaatttttttaacaagatagatttatatgtgatagatcactacacaaacatgcaaggttaaagtttaatttgttttttttatccttagaagttaagttttaacttgcttgtttgcagagtaatataacacatattaatctatcgtctcattattaaaaacattttataactatttgattgatacgtaaataacgaggtgatgtccgttcgagaatttaaaattcactcctgacaatgcatatacatagcatgtattagtatttattaataagaaactactatttattactagcaaattgttgtcttatgaaaactttagggcgtcaggagacacctggtatctaggcacttatgcaagctctagaaaaaataggaaagctaatcatcagtgtcaatgagacaacgagatgatgtgctatggggctgggagcagttagtgcaaggacaaacggatggatcaataatactctacctgatgagacttttcacacgtcttcatcaactcacacttcacttatttgagttattacttcctctgaaagccacccttgtggccatgaaaaattcagtacccttcacctgttcaatcttgggtcatttcagccattgtagcagtttaattagcaaccatgtttttaccgctaattaagtcttcgtctactcatttcacttattgatcagttatttcctctgaaaaaccactcctgcgtccatgaaaaactgatcattcagacattcacttgtccaaaatcttgtgtgtcatttcagtcattttaacagtttaattagcaccatgtttttactgctactcatttcacttattgatgatcagttatttcctctgaaaaccattcctgtgtccatgaaaaactgatcattcagacattcacttatccaaaatcttgtgtctgtcatttcagtcactttaacagtttaattagcacctgtttttactgctaattaagtcttcgtctactcatttcacttaatgatcaattaatatcctctgaaaaccaatcctgtgtccatgaaaaactgatcattcagacattcacttgtccaaaatctcgtgtctgtcatttcagtcattttaacagtttaattagcaacatgttttccctgctaattaagtcttcgtctactcatttcacttattgatcagttattcctctgaaaaccactcctgtgtccatgaaaaactgatcattcagacattcacttgtctaaaatctcgtatctgtcacttcagtcattttaacagtttaattagcaccatgtttttcctgctaattaagtcttcgtctactcatttcacttattgatcaattatttcctctggaaaccactcctgtacatgtccatgaaaaactgatcattcagacattcacgtgtcagtcattttaacagttcaaatagcaacatgtttttactgccaagtcttccactgatgcatatgtatgcttgacattgttcagctgggaggaatgcggtgggacccaagcctgacattcgccatccggccgaagcgcgggcaggactccggcgacggcggctccggctccgactacgactccttcagccccaagaaggcgaggagggcggcggccggctacgatcagctcggccggttcgaccggggcatgatccggtggtccgacgacgagggcagcaagtccaacacggcgccgatcacgccgaccacgccgccgatcagccggtgccggccgtcgaggaggaagggcatcccccaccgtgcacccttctacggttagctcacacactacaccaaccaaaaaaaaaattatcacccatcaccagcatatactagtctgtccttaaaaaaagcaaactctagctacgattctagacatatcgtagctaggattgtaattttttttggacggaaggggtatatcactagctcttcagccaaagtgaccaaacctagctatcaccagttcactgctagtactagctagccacatatatgtacatgatcaagtgtcaggtctgaaatagtgaagtgatatccaatcagctactgttaggtcactagctagatatgatatgttgattagcagctagcctgatacatatagttgtataaaatatacaagtgtacacaataattaatctaggtcatgaagtaagtatatatgtgtacatatgaaatatattggcaaatgttgtcatctggagtaagttataaaggccatggtggtgatggcctgctttcatgcatgtagacacaaggttaagttaagacaagaaaaagggagacacagggaggatagaaacataggtagtggtttttaggtaggtcgagattaatatgtgaaaaaggaataagcatcatgtatttatctcggtttgtgtagtagtatatacttggctgtttgcccccaccacccaatgcgtttattagcgttgtggtgtgtagttttccacttttaagtttcagagtttctcctttgatcctctgggacttaatttgtatagacaatgtatgatgttttacttggaaaaataagggaaaaaatagaatgatggatgactt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0624900, RefSeq:Os06g0624900