Os01g0273000

From RiceWiki
Revision as of 18:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0273000

Description

Similar to 26 proteasome complex subunit DSS1 (Deleted in split hand/split foot protein 1) (Split hand/foot deleted protein 1)

Version

NM_001049247.2 GI:297596527 GeneID:4325173

Length

2559 bp

Definition

Oryza sativa Japonica Group Os01g0273000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9440610..9443168

Sequence Coding Region

9440785..9440918,9442870..9442966

Expression

GEO Profiles:Os01g0273000

Genome Context

<gbrowseImage1> name=NC_008394:9440610..9443168 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9440610..9443168 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgccggcggacgcgaaggcggaggcggccaagatggacctcctcgaggacgacgacgagttcgaggagtttgagatcgaccaagaatgggatgacaaggaggatggtgatgaggccatccagcaatgggaggatgattgggatgatgacgacgtcaatgacgacttctcgcttcagctgaggaaggagctggaggaatgcaacacccagaagatctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAPADAKAEAAKMDLLEDDDEFEEFEIDQEWDDKEDGDEAI QQWEDDWDDDDVNDDFSLQLRKELEECNTQKI</aaseq>

Gene Sequence

<dnaseqindica>2251..2384#203..299#gaagaagaacaaaccgcctccaaaaatctagggtttccacccgcgcgcgacgcgattcaggtgggcgccgctccctctcccgctcgatccctcctattcctcttcctcctcctcctcccgcgcgcacgattgcacgaatcgctcacgatttccgatccgttcggccgcgtccttgcaggtgtagcagcagcggcagagggtgatggcggcggcggcgccggcggacgcgaaggcggaggcggccaagatggacctcctcgaggacgacgacgagttcgaggagtttgagatcgaccaaggtatgcgcggcccgcggctccctcctatgacctatccctcccccaacctatcgtcgagtcgaatcgccgtggtactgtttgcgttctctagggtgggggaagcgacgccgattcgccgcaggttgcgttcgtggccgagaccttcggtttgggcgagttggtttggttggtcaggagaccgtgcggcctgctatctcgtgcgatctggtggattctattactttttttggggaaaatctgtgctcttttagtttcgcataatgcaatgtatgttctaagttggtttgcttttggtattgttgttttccttatcgagttaattcatgctcgcttgcttgcgacaattgtgacctgtgccttgtgtgctttcgtatctgtaccggtttcttcctctcactggcatatagtgtaaagattcacatattagaatgtagaaatttagaatgataaacccctaagatttttaagtgtaggggcatatgaccgaaaatgtttccattggtgctgcctgttgaggtgaatcataacaattgtgagcagttgatgaaattttgtgttcttttgcaagtccattgaacaataatttgtagtttagtttttagaccaaaattttgtctttaaaccttttcatgataggcatcccaatttatttttgtaattatcctagtccatacctgctcccttcctcctctaggaacacatgatatcttctctctctcttcgaggcaactagtccatgaattgtgatggaggccattacattaccaaggttggttccagtcctgttgccacctgcaaatgggggtggcagtgttggagccagctattgcacccctaccactaccagtacgcttgggcactagcctgcaaagaagctgttctgaaagcacgctctatgttgtcctagcctcttagggtctatagtgatttaacggatagaagattttatcgctttttgtccatggtttatcgagtagagaaaaggagatatgtactcaacatatgaatgagataaggacttctagcttgtgctactattaatggttttatttttaagcgaaatggaaatgtacagactaccttccccttactgggaactgctcttcttgttaccttattatcatggcttttcttccattaaaacccttcttgtgatttgtgcttatgggcctgtttagatccatttggaatggcaaatggcaaaagatttggcatggagttggtgtttagatgcatcctagagttttgccattttagcactagagagagagagcgtggtcccggagcacttcttggcaaaatttgctaccttgggctagcaaatgacaaatgccaaattgccaacttttgctactagtgtttggatccaaaatggcaaaactaaacaggccctatgtatgatttagtggctaccaaacaacgtagaggtttccacttcttttgtcatttatgtgttggattttttatgcacattgtactatatgtggtgtgttttcttctatttaaaatgagcagataacctaatattttgtgacatcacggggttatatgatttggcacaaacttattgtttggtgcttcttccatgtattgagctataacatctcatattgggcaactgtctgtatggttcacagggaaaaaaaaacttctatagttttaggatgtttctattggcttcctctctatatggtggtaatagctactttcttgaagttgagtttagcattttgatttattctttacagtgccttatggtcagcaagttgtgcttcacactttgatttttggcatgcggctgtcacttctgtgttgcaatctgtttcccccattttgtacattcttctgcaagcaatatgcgatcctagggtgaagttgtggatctggtgctacaatgttattatgtaaggcttgcacttacccattcttcctgctttcttatattttgtagaatgggatgacaaggaggatggtgatgaggccatccagcaatgggaggatgattgggatgatgacgacgtcaatgacgacttctcgcttcagctgaggaaggagctggaggaatgcaacacccagaagatctgaactacttttttttcccagttatgtttagctgtagcacctatgctgggtcaggcacttttgtaccctttgtgccccattgctttctcaacctgcaatgttcctactatactcctacttgtgtgctgaaacctgcgatcaaatttaatttgtgaaagggttaaaaccaagttggtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0273000, RefSeq:Os01g0273000