Os01g0279900
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os01g0279900 |
|---|---|
| Description |
Similar to Transcription factor TGA6 (AtbZIP45). Splice isoform 2 |
| Version |
NM_001049286.1 GI:115435985 GeneID:4326907 |
| Length |
6587 bp |
| Definition |
Oryza sativa Japonica Group Os01g0279900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:9928210..9934796 |
| Sequence Coding Region |
9929460..9929518,9930795..9930870,9930951..9931010,9932998..9933075,9933157..9933208 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:9928210..9934796 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:9928210..9934796 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcagatatgagccctaggacagatacatcaacagatgataccgatgataaccacatgcttgaaccaggtcagcttgctcttgctgctgcttctgactctgacagatccaaggacaaacatgaagatcaaaagacattgcgtcggctcgcccaaaatcgcgaggctgcaaggaagagtcgtttgaggaaaaaggcatatgttcaacaattggagaatagcaggctaaagcttacacaactagaacaagaattgcaacgagctcgtcagcagggcatttttatatccagctcagtggaccagactcattccatgagtggaaatggggcattggcttttgatatggagtatgcacgttggttggaagaacacaataggcaaattaatgagctaaggtctgcagtcaatgctcatgcaggtgataatgagctccgtggtgttgttgacaagatcatgtcacactatgaggagattttcaagcagaaaggaaatgcggccaaagcagatgtctttcatgtgttatcaggcatgtggaagacaccagctgagaggtgtttcttgtggctaggaggattccgaccatccgagcttttaaagcttctttcgacacagcttgaacctctcactgagcagcagctgtcagggatagccaaccttcagcagtcttcacaacaagctgaagatgctctttcacaaggaatggaggcccttcagcagtccttggcagaaacattggctgggtctcttggttcttctggatcaacgggaaacgtggcaaactacatgggccaaatggcaatggccatggggaagcttgggacccttgagaatttccttcgccaggctgacaacctgcggcagcagactcttcaacagatgcaaaggatactgaccactaggcagtctgcccgtgcgcttcttgtgataagcgattactcttcgcggcttcgtgcccttagttccctctggcttgctcggccgaaagaatag</cdnaseq> |
| Protein Sequence |
<aaseq>MADMSPRTDTSTDDTDDNHMLEPGQLALAAASDSDRSKDKHEDQ KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISSSVDQT HSMSGNGALAFDMEYARWLEEHNRQINELRSAVNAHAGDNELRGVVDKIMSHYEEIFK QKGNAAKADVFHVLSGMWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGIAN LQQSSQQAEDALSQGMEALQQSLAETLAGSLGSSGSTGNVANYMGQMAMAMGKLGTLE NFLRQADNLRQQTLQQMQRILTTRQSARALLVISDYSSRLRALSSLWLARPKE</aaseq> |
| Gene Sequence |
<dnaseqindica>1251..1309#2586..2661#2742..2801#4789..4866#4948..4999#5148..5419#5772..6017#6179..6325#gtcgctcgtcgacccctctccgccgccgaggctcgctgtcccaaggtattcctcttgtccccttcctcggctcctcctccccctgcgccgcaactctgccgtggcccgcccggccgcccggagatccgtccgggctcggctccgcctcatttctttcgctggcgatgaggtggtctaacttgccgatgcgtccagagtaggctctgttcttttgtgttcttttggttgagttgggaacccatccctccggtacggaaaacgaagcagtccattagcacgtgattaattaattatttgctatttttttttcaaaaatagatcaatataatttttttaagcaactttcatatataaactttttgcaaaaaacacaccgtttagcagtttgaaaagcgtgcacgcggaaaatgagatgggggagttgggaactccaggaaacgaacagagccttaaatccagatggatgtttctcttttacctccagctaatccgtccgcttcgttgaggattccattgaatgcttggctgtggtggagtgctacacgactgctagtagcagcttgcttctcagcaatttgggtgaaccccccacattcttgaggtatcgctgcattttatttggcagcgcatttataattgctgtcttactaaaaaaacacatgtttttattttctccttttaacattacattttatatgcatagccatgcaaagttcatggtacagtagggtctactttcaccttatttgcttgtatacctgaaaagcctgactgttggacatagccacgcaataattgtaaagaagaggttagaataatctatatgctaatattgatccttttatgttactgattctgcgtgtatttcaattgtacctcctgttggacataggcatgatgaagcaaactgtttacatttagagtgtattagagcataggaattctatcatcgcaaatggacagatggacatgctatatgaaaatgtaaaatgcattagtctggagtagctattatgtgtgctccatttcaaactgtatatgtggtacttattctggttgactcatcatgtgcagtgttatctattttcaccaaattttaattttttaatagccaacctgtctctttgacatgttgtatccgtcaatacaggcagtaacaattggatctacatcttgccactacaaaaggatcaacgatctgtactagccttcatttgtgggttcctcattgggaattgggattctttacaatggcagatatgagccctaggacagatacatcaacagatgataccgatgataaccacatggcaagtctttctttctttcttttttctagactaattcttgttaaccttgatatgattgggcacaaagcatcaattgtccagtttcatgtttggaggaaactactaaactattatactaattatcattcaaaagtgagaaagagcatcaattctagcaatagaaaattaaaacagcaaggttgtctgacgaagtaaggatgtatactgtagaggatgttttatatgaaaattaggctatcgttgtcagctgttcagtaataatctccaaaattcatggaatatgtatatattgaaacgttcagtatatgttggcattctctacatagaaagttagtttcatacgaaaatcttgttatcagagaatgccctttgctgcagagtttgatatgttggcatttaataatccaattgagctactgagcaatgcatatgtgctgtgcatgggacctacacataggtctatcaaattagggactaccagaaaacaatataaacagttgggtttccccattaagaaagctggcaaagtttgcctatggcacgtttttgtgagatttgtggaattcgttcatgcgatttggatccttatgcaccttgaattcgcttgagttccttgaatacattttgtttgatattttatcccttccaatagcttgtgtaatttaacttttggtatatagcatgatcaaaagatatagacacgtttattgaaaaatatgaaatgcaaatcgtaacaggcctatttataagttgcgtaatatgataaagatgtgggcttttttgcattgagaaatttgttatggcagaaagtaatttaatagatactaaggctgtgttctttcccttaggtgttacggagattttcagtgcatgcaaaacgagaaaccattataaacttgaaaaataacaatttatatatagattttttttttgcaaaaaaaggcaccatttaacagtttgaaaagtgttctaatggaaaatgaggaagctaaagtttggagttgtgcaaaagaacgtggcctaagtaataggatgcataaacaaaaattacatgctaatgcctgttggtttacaaaattaaagctaagtgatcaaattcatttttttgaatatgttttagtccacagacatttcaaaacaaactgatctttctttttcataaaagttggagtcttattcatttttttatgtaaaacatcaggaatcaagaaggtaaaattcattattatataaaataggaatatcgggagcttgatagttatgttgtcacctgcagcttgaaccaggtcagcttgctcttgctgctgcttctgactctgacagatccaaggacaaacatgaagatcaaaaggtaaaattttgcaagtagctctctcctttttgtttcatattatcgttgttgcaacaaatattttccttatcactttgtagacattgcgtcggctcgcccaaaatcgcgaggctgcaaggaagagtcgtttgaggaaaaaggtacttgtgttctgctgtagcttttatactaaagaagtttattccttttcaagttttgaaaattgatggtttataccatgttctatttttttcattctgttactaggcattattaaactgtattcttgtattaggattccactatcatttctactagaagatagcatgcgttgcattgggaacttctatatcacttgcagattcatggaaaatggaaaagttttgccaaaattctatggggaatcacttgcaaaaatcggctgggtatgggggtaaatagttcagacagacatgtgcacacctcaaaaatcagaaaatttgtttgttgggcaacatgagaaacgatattcccatcataatatataaggctgcactagatgtgtacatgtctaggataatgaaataatcaagttagtaatagtaatgaattttattgaaaggtagaagatacctggttttaacttatcatccatgcaatggagtctagtggctactcattatttaaacacttgcacaatttgagggatgattattaaaacaagtagtacatttacagtcttacacactatatcagggtaaaccgtcagttgagttggtcagctggcttcatcaatttttggaaaagtatgcttgttgctccagcggctgagctagcaaaataatttattacctgcaattagaaacacaaacgagaataaggatgccacagatgttctcttacctgttctgtaagctgattcagattgattgagctgacaccggccatgattcttatactcaaatctgtggaacaatccacacaacacaaatatacacggttcaatttaattaaggcatgtagcttggcagtgaaaggccacgatggtgatgggtgatcataggcatctaccatcaggttggaccaccagagatgatctctctgctgatgacgtgtactaatctacaatctatgagaactaaacatgtttaagaggatgaagtaacatatttaaggcattatatgcgtgattgcctgtccttgctggagagattggatgctggtcgggacatggcagagagctccaagggtatataggcatgcaagacttgcagtctcgcacagtgccctccaattctgggcagttgcaggtaagaaccacggctgtctccggtgggatgatccattgcagtgaaccatcatatttcattgacttattgaaggaatggagaaggattgattgttgagcttaagaggagattaattaaaaggaatgaacagtgcgctcctttggcttcccatctttttattgcatttctgatggtttccggctgtgataccctgggtgatcaaggagtgccgatctgagccacacatggctatcatacaatgcgagcctctggtagtcaatcaggtgtttgtgtacttgcgtggggaaagaggagataggcagcctggctgggctgggcctcaagtatgaccttgattagtactgcaagtttatctaacggctgataatcgagagacatgttgatccaatggctgaaacttgttgatgacgtggctaaacttggtgacttctttatggtaattattgctgtcagtgggttgtaactgtatagaaagaaaggattttgtgatggcacagtgcacaccatatattgctgggggcaaatagaatggtaaattgatttatgtaggggttactaaacttccattttttatatcgtagtaagtattttgtgtatttgtctggtgatttttaccagtattttgcacaaaaggtctttagtgggtctgcttgttaaatcttggaaacaaaaggagggaaaaataatggtcagtgctagttggcttactgttcagatttcaatgaatatacttttaaagtttctgctgatattgttacattatgtaaaaagggaaaatggttgatgcaagttattcttttcagcttttgtacaaattttcatggtcatgatgcaatattgaataacttcatctttttaggcatatgttcaacaattggagaatagcaggctaaagcttacacaactagaacaagaattgcaacgagctcgtcagcaggtttgcttctattgtgtctcgctgttttgagctctggctgcaagagttcatttcaagtaggcttacgggaatttctcacagggcatttttatatccagctcagtggaccagactcattccatgagtggaaatggtatatatcaaatccttcaatgtttaatatataatcactcttttttgcagcagcaactgtttggttgatcattacaatgggatatatgaaagcaatacataaacattctgccttgttgacagagcaattatactgtattttcttgcaggggcattggcttttgatatggagtatgcacgttggttggaagaacacaataggcaaattaatgagctaaggtctgcagtcaatgctcatgcaggtgataatgagctccgtggtgttgttgacaagatcatgtcacactatgaggagattttcaagcagaaaggaaatgcggccaaagcagatgtctttcatgtgttatcaggcatgtggaagacaccagctgagaggtgtttcttgtggctaggaggattccgaccatccgagcttttaaaggtctgtaaagtcttacgatgttcttgttgtttatttgagccatccttctattgcaaagcccctcctattaccaaaaccaatgtttctaccataatattattagcatatcaagaacaaattatcagtctatacctatttttccttctatttcatatactcatatcaccaggtcattgtaaacttgtgctgtaataggcagattgtagttttgataaaacactatcttgctttgcataactcttgcatacctcatttcttgccattggagagcatgttagtacttcatatggcctttctttatttgcttatgaatttatttgagtaagagttactaaaagtaagaaaactgcagcttctttcgacacagcttgaacctctcactgagcagcagctgtcagggatagccaaccttcagcagtcttcacaacaagctgaagatgctctttcacaaggaatggaggcccttcagcagtccttggcagaaacattggctgggtctcttggttcttctggatcaacgggaaacgtggcaaactacatgggccaaatggcaatggccatggggaagcttgggacccttgagaatttccttcgccaggtaccatgttttttctctctctctcttttctagtgtaaattatgtatgtaaaccttgggtatagtcttatgatgtccatggagtatgtagtatgcggattcgagtaaactatagttcaaaattgtgtactaaatcctctttatcttttccactatatgaaggctgacaacctgcggcagcagactcttcaacagatgcaaaggatactgaccactaggcagtctgcccgtgcgcttcttgtgataagcgattactcttcgcggcttcgtgcccttagttccctctggcttgctcggccgaaagaatagcaagcgcaagtaacttgactgcaaccacatttttcgggtttgggaggtgatggtgatcttacctggaagagttgacaatcctgcaaaggacttgattcggagatatttgcacatactataatccaaaagagatccttgtgttcaggtagcttagtcttatggttaagtgcattaggccctggcccatgttgtactgttagccgctgtaaaatactgttccattattacttatgtatctgtaatatcctaattttcagagaat</dnaseqindica> 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