Os01g0296700

From RiceWiki
Revision as of 18:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0296700

Description

Glycoside hydrolase, family 3, N-terminal domain containing protein

Version

NM_001049341.1 GI:115436095 GeneID:4326722

Length

1905 bp

Definition

Oryza sativa Japonica Group Os01g0296700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10920314..10922218

Sequence Coding Region

10920314..10921253,10921329..10921957

Expression

GEO Profiles:Os01g0296700

Genome Context

<gbrowseImage1> name=NC_008394:10920314..10922218 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10920314..10922218 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcaacggcgtcccggcctgcgccgacgcgcgcctcctcacggagaccgtccgccgcgactggcagctccacggctacatcgtctccgactgcgactccgtccgcgtcatggtcagggacgccaagtggctcggctacaccggcgtcgaggccaccgccgccgccatgaaggccggcctggacctcgactgcggcatgttctgggagggcgtccacgacttcttcaccacctacggcgtcgacgccgtccggcaggggaagctcaaggagtccgccgtggacaacgcgctgaccaacctctacctcacactcatgaggctcggcttcttcgacggcatcccggagctcgagtccctcggcgccgccgacgtctgcaccgaggagcacaaggagctcgccgccgacgccgccaggcaggggatggtgctcctcaagaacgacgccgcgctgctcccgttgtcgccggagaaggtcaattcggtggcactgttcgggcagctgcaacacatcaatgccaccgacgtcatgcttggagactacagaggtaagccttgcagggtggtgacgccgtacgacggcgtacggaaggtggtcagctcgacgtcggtgcacgcatgcgacaagggatcgtgcgacacggcggccgcggcggcgaagacggtggacgcgaccatcgtcgtcgccggcctgaacatgagcgtggagagggagagcaacgacagggaagacctcctcctgccgtggagccaggccagctggatcaacgccgtcgccgaggcctcgccgtcgccgatcgtcctggtgatcatgtccgccggcggcgtcgacgtctccttcgcccaggacaaccccaagatcggcgccgtcgtctgggccggctaccccggcgaggaaggcggcacggccatcgccgacgtgctcttcggaaaatacaatccaggaggaagattgccgctgacgtggtacaagaacgagtacgtgagcaagatcccgatgacgtccatggcgctgcggccggacgccgagcacggctaccccggccggacctacaagttctacggcggcgccgacgtgctctacccgttcggccacggcctcagctacaccaacttcacctacgcgtcggccaccgccgccgccccggtcacggtcaaggtcggcgcgtgggagtactgcaagcagctcacctacaaggccggggtgtcctcgccgccggcgtgcccggccgtgaacgtggccagccacgcgtgccaggaggaggtcagcttcgccgtcacggtggccaacacgggcggcagggacggcacccacgtcgtgccgatgtacacggcgccgccggcggaggtggacggcgcgccgcggaagcagctggtggcgttccggcgggtgcgggtggccgcgggcgccgccgtcgaggtggccttcgcgctcaacgtgtgcaaggcgttcgcgatcgtcgaggagacggcgtacaccgtcgtgccgtcgggagtcagcagggtcctcgtcggagacgacgcgctgtcgctgtccttccctgttcagatcgacctgcaggcggcagcatag</cdnaseq>

Protein Sequence

<aaseq>INGVPACADARLLTETVRRDWQLHGYIVSDCDSVRVMVRDAKWL GYTGVEATAAAMKAGLDLDCGMFWEGVHDFFTTYGVDAVRQGKLKESAVDNALTNLYL TLMRLGFFDGIPELESLGAADVCTEEHKELAADAARQGMVLLKNDAALLPLSPEKVNS VALFGQLQHINATDVMLGDYRGKPCRVVTPYDGVRKVVSSTSVHACDKGSCDTAAAAA KTVDATIVVAGLNMSVERESNDREDLLLPWSQASWINAVAEASPSPIVLVIMSAGGVD VSFAQDNPKIGAVVWAGYPGEEGGTAIADVLFGKYNPGGRLPLTWYKNEYVSKIPMTS MALRPDAEHGYPGRTYKFYGGADVLYPFGHGLSYTNFTYASATAAAPVTVKVGAWEYC KQLTYKAGVSSPPACPAVNVASHACQEEVSFAVTVANTGGRDGTHVVPMYTAPPAEVD GAPRKQLVAFRRVRVAAGAAVEVAFALNVCKAFAIVEETAYTVVPSGVSRVLVGDDAL SLSFPVQIDLQAAA</aaseq>

Gene Sequence

<dnaseqindica>1..940#1016..1644#atcaacggcgtcccggcctgcgccgacgcgcgcctcctcacggagaccgtccgccgcgactggcagctccacggctacatcgtctccgactgcgactccgtccgcgtcatggtcagggacgccaagtggctcggctacaccggcgtcgaggccaccgccgccgccatgaaggccggcctggacctcgactgcggcatgttctgggagggcgtccacgacttcttcaccacctacggcgtcgacgccgtccggcaggggaagctcaaggagtccgccgtggacaacgcgctgaccaacctctacctcacactcatgaggctcggcttcttcgacggcatcccggagctcgagtccctcggcgccgccgacgtctgcaccgaggagcacaaggagctcgccgccgacgccgccaggcaggggatggtgctcctcaagaacgacgccgcgctgctcccgttgtcgccggagaaggtcaattcggtggcactgttcgggcagctgcaacacatcaatgccaccgacgtcatgcttggagactacagaggtaagccttgcagggtggtgacgccgtacgacggcgtacggaaggtggtcagctcgacgtcggtgcacgcatgcgacaagggatcgtgcgacacggcggccgcggcggcgaagacggtggacgcgaccatcgtcgtcgccggcctgaacatgagcgtggagagggagagcaacgacagggaagacctcctcctgccgtggagccaggccagctggatcaacgccgtcgccgaggcctcgccgtcgccgatcgtcctggtgatcatgtccgccggcggcgtcgacgtctccttcgcccaggacaaccccaagatcggcgccgtcgtctgggccggctaccccggcgaggaaggcggcacggccatcgccgacgtgctcttcggaaaatacaatccaggtacagaatcgagtgtacatgtagattaattctctgttcttcaatgcatttttctgaaacatttttgttttgtaggaggaagattgccgctgacgtggtacaagaacgagtacgtgagcaagatcccgatgacgtccatggcgctgcggccggacgccgagcacggctaccccggccggacctacaagttctacggcggcgccgacgtgctctacccgttcggccacggcctcagctacaccaacttcacctacgcgtcggccaccgccgccgccccggtcacggtcaaggtcggcgcgtgggagtactgcaagcagctcacctacaaggccggggtgtcctcgccgccggcgtgcccggccgtgaacgtggccagccacgcgtgccaggaggaggtcagcttcgccgtcacggtggccaacacgggcggcagggacggcacccacgtcgtgccgatgtacacggcgccgccggcggaggtggacggcgcgccgcggaagcagctggtggcgttccggcgggtgcgggtggccgcgggcgccgccgtcgaggtggccttcgcgctcaacgtgtgcaaggcgttcgcgatcgtcgaggagacggcgtacaccgtcgtgccgtcgggagtcagcagggtcctcgtcggagacgacgcgctgtcgctgtccttccctgttcagatcgacctgcaggcggcagcatagcagcataggttctctgcaattcttggagttcgttggattcttttgctggggtggtaaaaggtaaaaaaaaaatcgaagcaagtgtaattagtttacaccacgctatagatgaaacttttacaaagcacattgcatcattgggaattaattggaacaggaattttcatttttagttttgctcaatgtattactgtgatggcatgttattcagcaatgttacactttttttttcaataatggaaatcaatcattagcagtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0296700, RefSeq:Os01g0296700