Os01g0329300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0329300 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001049456.1 GI:115436325 GeneID:4326983 |
| Length |
2789 bp |
| Definition |
Oryza sativa Japonica Group Os01g0329300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:12844403..12847191 |
| Sequence Coding Region |
12844443..12845666,12845758..12845925,12846072..12846116,12846218..12847060 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:12844403..12847191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:12844403..12847191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggccaacggcgagcgcggctgcacgccggagcacgcggcaaccgtcgacgatgacgacgacaatgtcgcgtcgcacggcggcggcggtggccgtgtccgtggtgctcctcctcctctcgtcgtgtctcccttgttgctcggaggcaaggctgcactaccaccggaggcagcaccggagggcgccgcaccgcgggcaccaccgcgcggcggcggcggcggcggcggcgacgaacggcggcagccacatctctcagccgcccgccgcgctgcctcccgacttcgacagcggggaatcgccggcggagacgccgggcttgcctccggctggcgtcgaggacgctccgccgcggcgatctccgcgtgagaagccgtgcccgacgatgcagcctcccgtcaagccgccggaggagttgtcgccggtgggcgcgccgaggtcgcgcgttcgggccatgccaccgtcaccctcgctgtcgccgccggccaaggcgccgtcacattctcacgctaagacgccgtcgatgccgccggcggagcggccggcgcttcctcccaccaaggcgccggcggcgatctcgccggccacgccacctcaactctccccagcgaacgcacattcgacgcaccatcacgcgaagccaccgtcattgcctccggccgagccaccagtgccctcgccgtcgccggagcatccaccgcggcactccccgtcaaagccaccggcgtacgctccggccaagccaccgacagcactacgtccggcgatccctccggccgcaatgccaaagccaccgtcagtcgctccggtgcagccaccgcagcggccgcctgccccggcaacaaagccaccgccgtcgtttccaccgcagctcgccccgacgatgccaccaccggcgcacgcgccggcggagacaccagcaccaccaacaacgccaccggcgctgccaccggccacgacggcgccatcaccgaagaacagctcatcatcaccacctccaccctgcaccggcggcggcggcggcatcagcaacgtgttcgacgtgagggcgttcggcgcgacgggcaacggctcgagcgccgacggcgacacgcgcgcgttccgcgcggcgtggaaggcggcgtgctcggcggagtccgccaccgtgctcgtgccgtccgacggcgtgttcaccatcacctccaccatcttcgccgggccatgcaagccaggcctcaccttccaaatcgacggcgtgctgatgccgccggacgggccggcgagctggccggcggcggacggccggcggcagtggatcgtcttctacagggccgacgggatgacgctgtccggcaagggcaccatcgaaggcaacggcgaggagtggtggaatctcccgtgtaaacctcacaggggccccaatggatcgaccctacccggcccatgtgagagccctgcactgatcaagttcgtggcgagcagcgacgtgagcgtgcagggcctgaggatggagaacagcccgcagttccacctcaagttcgacgggtgcagccgggtgctggtcgacggcctcgtcgtcagctcgccggcgtcgagcccgaacaccgacggcgtccacgtcgagaacacgagctccgtccggatcctcaactccaggatcagcaacggcgacgactgcgtcagcatcggcggcggctgctcgggggtgcgcgtcgagaacgtcacgtgcgtgcacggccacggcatcagcatcggcggcctgggcgcgcgcggcgcgcgggcgtgcgtgtcgaacgtgaccgtgcgcggcgcgcgcgtcgtcgactccgacaacggcgtgcggatcaagacgtggcagggcggcgccgggtcggtgtcgggggtggtgttcgacgccgtccagatggtgaacgtcaggggctgcatcgtcatcgaccagtactactgcgatgcgcacggcggcgccggcgccggctgcgccaaccagaccgccgccgtgcgcgtcgacggcgtcgcgtacagggggatccgcggcacgtacaacccgcgcggcggcggcggcgcgccggtgcgcttcgcgtgcagcgacaccgtcgcctgcacgggcatcaccatgaccgacgtcgagctgctgccggccggcggcggcgacgaaggcggcggtgccagcgccggcgcgaagctggccgacccgtactgctggaacgcgtacggggtgatggagacgctgacgcagccgccggtgcactgcctgcaggaaggtcgcccagagtcgctgcaagatcagctcgcaagctgctga</cdnaseq> |
| Protein Sequence |
<aaseq>MGPTASAAARRSTRQPSTMTTTMSRRTAAAVAVSVVLLLLSSCL PCCSEARLHYHRRQHRRAPHRGHHRAAAAAAAATNGGSHISQPPAALPPDFDSGESPA ETPGLPPAGVEDAPPRRSPREKPCPTMQPPVKPPEELSPVGAPRSRVRAMPPSPSLSP PAKAPSHSHAKTPSMPPAERPALPPTKAPAAISPATPPQLSPANAHSTHHHAKPPSLP PAEPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRP PAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPATTAPSPKNSSSSPPPP CTGGGGGISNVFDVRAFGATGNGSSADGDTRAFRAAWKAACSAESATVLVPSDGVFTI TSTIFAGPCKPGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRADGMTLSGKGTIEG NGEEWWNLPCKPHRGPNGSTLPGPCESPALIKFVASSDVSVQGLRMENSPQFHLKFDG CSRVLVDGLVVSSPASSPNTDGVHVENTSSVRILNSRISNGDDCVSIGGGCSGVRVEN VTCVHGHGISIGGLGARGARACVSNVTVRGARVVDSDNGVRIKTWQGGAGSVSGVVFD AVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVRVDGVAYRGIRGTYNPRGGGGAP VRFACSDTVACTGITMTDVELLPAGGGDEGGGASAGAKLADPYCWNAYGVMETLTQPP VHCLQEGRPESLQDQLASC</aaseq> |
| Gene Sequence |
<dnaseqindica>41..1264#1356..1523#1670..1714#1816..2658#aagcagcgctagctccacccagctaggccgtacgtcggcgatggggccaacggcgagcgcggctgcacgccggagcacgcggcaaccgtcgacgatgacgacgacaatgtcgcgtcgcacggcggcggcggtggccgtgtccgtggtgctcctcctcctctcgtcgtgtctcccttgttgctcggaggcaaggctgcactaccaccggaggcagcaccggagggcgccgcaccgcgggcaccaccgcgcggcggcggcggcggcggcggcgacgaacggcggcagccacatctctcagccgcccgccgcgctgcctcccgacttcgacagcggggaatcgccggcggagacgccgggcttgcctccggctggcgtcgaggacgctccgccgcggcgatctccgcgtgagaagccgtgcccgacgatgcagcctcccgtcaagccgccggaggagttgtcgccggtgggcgcgccgaggtcgcgcgttcgggccatgccaccgtcaccctcgctgtcgccgccggccaaggcgccgtcacattctcacgctaagacgccgtcgatgccgccggcggagcggccggcgcttcctcccaccaaggcgccggcggcgatctcgccggccacgccacctcaactctccccagcgaacgcacattcgacgcaccatcacgcgaagccaccgtcattgcctccggccgagccaccagtgccctcgccgtcgccggagcatccaccgcggcactccccgtcaaagccaccggcgtacgctccggccaagccaccgacagcactacgtccggcgatccctccggccgcaatgccaaagccaccgtcagtcgctccggtgcagccaccgcagcggccgcctgccccggcaacaaagccaccgccgtcgtttccaccgcagctcgccccgacgatgccaccaccggcgcacgcgccggcggagacaccagcaccaccaacaacgccaccggcgctgccaccggccacgacggcgccatcaccgaagaacagctcatcatcaccacctccaccctgcaccggcggcggcggcggcatcagcaacgtgttcgacgtgagggcgttcggcgcgacgggcaacggctcgagcgccgacggcgacacgcgcgcgttccgcgcggcgtggaaggcggcgtgctcggcggagtccgccaccgtgctcgtgccgtccgacggcgtgttcaccatcacctccaccatcttcgccgggccatgcaagccaggcctcaccttccaagtaaaaatatatataatcacgaacacacgccttgtccccgatttccatcaacttccttccccattgattaacccgtgacgtgtcgcggcagatcgacggcgtgctgatgccgccggacgggccggcgagctggccggcggcggacggccggcggcagtggatcgtcttctacagggccgacgggatgacgctgtccggcaagggcaccatcgaaggcaacggcgaggagtggtggaatctcccgtgtaaacctcacagggtacgtaattaaccaaccttaatctcgtgacacgacacgcttaatttcatctttgtaattagccgaccttaatctcgtgacatgagtgacacgcctatttttttctgtcagagagtacacactgactgtttcgtgtctatgttcagggccccaatggatcgaccctacccggcccatgtgagagccctgcagtaagtacactacaaatcgcattagctgcagtaatttaattattgagattgattaatcgagtgttaatcctagataaagtgagatatgttgtactgtgcagctgatcaagttcgtggcgagcagcgacgtgagcgtgcagggcctgaggatggagaacagcccgcagttccacctcaagttcgacgggtgcagccgggtgctggtcgacggcctcgtcgtcagctcgccggcgtcgagcccgaacaccgacggcgtccacgtcgagaacacgagctccgtccggatcctcaactccaggatcagcaacggcgacgactgcgtcagcatcggcggcggctgctcgggggtgcgcgtcgagaacgtcacgtgcgtgcacggccacggcatcagcatcggcggcctgggcgcgcgcggcgcgcgggcgtgcgtgtcgaacgtgaccgtgcgcggcgcgcgcgtcgtcgactccgacaacggcgtgcggatcaagacgtggcagggcggcgccgggtcggtgtcgggggtggtgttcgacgccgtccagatggtgaacgtcaggggctgcatcgtcatcgaccagtactactgcgatgcgcacggcggcgccggcgccggctgcgccaaccagaccgccgccgtgcgcgtcgacggcgtcgcgtacagggggatccgcggcacgtacaacccgcgcggcggcggcggcgcgccggtgcgcttcgcgtgcagcgacaccgtcgcctgcacgggcatcaccatgaccgacgtcgagctgctgccggccggcggcggcgacgaaggcggcggtgccagcgccggcgcgaagctggccgacccgtactgctggaacgcgtacggggtgatggagacgctgacgcagccgccggtgcactgcctgcaggaaggtcgcccagagtcgctgcaagatcagctcgcaagctgctgagcagtagcagacatgacatgcctcttcttttgacaatagatttcttctccgcgattcatgctaatctatagattttctttctcaacgattaactataactaacttttgagtcatccagactccagagttcc</dnaseqindica> |
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