Os06g0633800

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0633800| Description = Amino acid/polyamine transporter II family protein| Version = NM_001064667.1 GI:115469065 GeneID:4341591| Length = 3...")
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Gene Name

Os06g0633800

Description

Amino acid/polyamine transporter II family protein

Version

NM_001064667.1 GI:115469065 GeneID:4341591

Length

3364 bp

Definition

Oryza sativa Japonica Group Os06g0633800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26567382..26570745

Sequence Coding Region

26568284..26568704,26569162..26569314,26569425..26569628,26569711..26570176,26570269..26570401

Expression

GEO Profiles:Os06g0633800

Genome Context

<gbrowseImage1> name=NC_008399:26567382..26570745 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26567382..26570745 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatcagcagcgaatcgccgaatgggagccagcagattgtacaaaaggaaacacgagatgagacaacaccacttctgccggtcaaggtggaggaggaggggtttcatgagttcaatggagcttcattttccggggcggttttcaatttatcgaccactattgttggggctggaattatggccttgccagccagtatcaagatgttgggcatcatcccagggattctgatgatcatcgttgtggcgttgctcacagaggcatcaattgacatgcttgtcaggtgcagccaccagggcaagattacatcttatggttggctaatgggtgaggcttacggacagtggggaagaattgcactgcaggcctctgtcgtcataaacaacattggcgtgatgattgtttacatgattatcattggtgatgtattatctggaacatcatcaaccggtgttcaccatcgtggtatacttgagggctggtttggagctcatctctggaattcacgtgccattgttcttcttgcgacgactcttttcgtgtttgctccattggtgagctttaagcgtctggattcattgagatacacctctgccctatcggttgctcttgctgtggtttttgtcgtcattactgctggaattgctatcatcaaactcttcaatggaactgtagcgatgcccaaactttttccagaactagatggtcttagttccatctggaagctcttcacagctgtccctgttcttgtcactgcctacatctgccattacaatgttcacagcattgacaatgagcttgaagacagaacacaaattaaacctattgtgcgaacatccctgttcctctgctccagtgtttacattgctacaagtttctttgcatatctcctcttcggcgagggtaccctagatgatgttctcgctaacttcgatgcaaatcttgggattccatttagttccgtctttgatgatatagtgcgagtgagctatgctgctcacgttatgcttgtctttcccatagtcttctttgcccttaggctcaacttggatggactgctcttccccacatcaaggcacatttctcgtgacaacaagagatttgccataatcactatctcactcctcacagtaatttatcttgctgccattttcataccgagcatttgggatgcattccagtttactggtgcaactgctgctgtcctgattggtttcatcttccctgccatggttatacttagggatccttatggaatcgcatccaagcgtgacaagatcttggctgtaaccatgatcgtgcttgctgtcctctccaattctgttgctttatacagcgatgcaatgaatatcttccgtaaggaagaggaggcatga</cdnaseq>

Protein Sequence

<aaseq>MGISSESPNGSQQIVQKETRDETTPLLPVKVEEEGFHEFNGASF SGAVFNLSTTIVGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSHQGKI TSYGWLMGEAYGQWGRIALQASVVINNIGVMIVYMIIIGDVLSGTSSTGVHHRGILEG WFGAHLWNSRAIVLLATTLFVFAPLVSFKRLDSLRYTSALSVALAVVFVVITAGIAII KLFNGTVAMPKLFPELDGLSSIWKLFTAVPVLVTAYICHYNVHSIDNELEDRTQIKPI VRTSLFLCSSVYIATSFFAYLLFGEGTLDDVLANFDANLGIPFSSVFDDIVRVSYAAH VMLVFPIVFFALRLNLDGLLFPTSRHISRDNKRFAIITISLLTVIYLAAIFIPSIWDA FQFTGATAAVLIGFIFPAMVILRDPYGIASKRDKILAVTMIVLAVLSNSVALYSDAMN IFRKEEEA</aaseq>

Gene Sequence

<dnaseqindica>903..1323#1781..1933#2044..2247#2330..2795#2888..3020#gggggcaaggagaagtactgtagcttgtgaaagcgagtggttttggatccaagctggttgattgattgctcttcgtctcccctggctataaaacgagcggggccgcagccgggctgcggcgaggccgccctccacagatttcttggcgatttgtctggttctgcctgctcttgctggtttcagatccgggaggggactgagcctccgaagttatcaggtatccccttttcttttgcttcagttttgagttcttggtgaggattcttgcttggattgggaagatcgttgcttttcttggggggctttgtgtcggtggtgggattcctgatcaattctaggagaagactggttctgagtagctggttcgtgggtcgcagtgattttggggataaattttggatatgtatgctgattaggatggacttgaagtatcattcgtacaaccgtgtcgtagcctcgtaggcttatgcccgtggttgtgaattgtggtggaaaggttggattttttgggctgagctttagttggtctaacatgatcttgcagcttgtttctttgtgcgttttgtctcatattctggatataattttatttactttatgttttgacttagagagttgcgtttctaaattcttaaagtcttttggtagaagagagaatgaacttcttgcttcaagggagtacctagtatcagaaatttcttctctccataagtccatacttgcattaattaaaaatgtgatacattcattttggggaatattaaagctgaacagcataagaaatggaaaccaagttaaaactgtctgattcaaagaaagttagatgcatgataataagcatacttggttttccagataaaaatctgactgaatccttgctatccaggagagtgaaagacataatggggatcagcagcgaatcgccgaatgggagccagcagattgtacaaaaggaaacacgagatgagacaacaccacttctgccggtcaaggtggaggaggaggggtttcatgagttcaatggagcttcattttccggggcggttttcaatttatcgaccactattgttggggctggaattatggccttgccagccagtatcaagatgttgggcatcatcccagggattctgatgatcatcgttgtggcgttgctcacagaggcatcaattgacatgcttgtcaggtgcagccaccagggcaagattacatcttatggttggctaatgggtgaggcttacggacagtggggaagaattgcactgcaggcctctgtcgtcataaacaacattggcgtgatgattgtttacatgattatcattggtatcccttctatgctctgctgttacatttgaacatttgacttttttagatgtgcaaccaaaaattgctgagctggactttgtgcaaataatctacagattgggtagaacatcttttattctagtgtagttaacttagggccaaacattttgttgtgaaaaaaaccccattattttggtgattttttatttagaggtttagagctagctgttaggcttggatttcttagcacttcattctcaagcaaaaacaatacaatttgtcatcgctgtcagctagtttgatcagttttttactaccaactggaatctttgcttctctgaaaagaaacaatgacctatccattctaagctatgtggagtcataggataattcctcctaatcaacacctgtcttgacagataactttgtttttccctaactgaagtcgatattaattcttaaatttgtaaaataggtgatgtattatctggaacatcatcaaccggtgttcaccatcgtggtatacttgagggctggtttggagctcatctctggaattcacgtgccattgttcttcttgcgacgactcttttcgtgtttgctccattggtgagctttaagcgtctgggtacgtcttagtgttttcatattggtaaagaaaaaatatccttcattgtatttgatgttattggcagcatgatgttacttatagattttgtcaattgtcatgccttgtagattcattgagatacacctctgccctatcggttgctcttgctgtggtttttgtcgtcattactgctggaattgctatcatcaaactcttcaatggaactgtagcgatgcccaaactttttccagaactagatggtcttagttccatctggaagctcttcacagctgtccctgttcttgtcactgcctacatctgccattacaatggtatgcactctcagtgctcagacctttttttttcaagtgttcaataatctgatgtctaaatgcacgctctcatgattcacagttcacagcattgacaatgagcttgaagacagaacacaaattaaacctattgtgcgaacatccctgttcctctgctccagtgtttacattgctacaagtttctttgcatatctcctcttcggcgagggtaccctagatgatgttctcgctaacttcgatgcaaatcttgggattccatttagttccgtctttgatgatatagtgcgagtgagctatgctgctcacgttatgcttgtctttcccatagtcttctttgcccttaggctcaacttggatggactgctcttccccacatcaaggcacatttctcgtgacaacaagagatttgccataatcactatctcactcctcacagtaatttatcttgctgccattttcataccgagcatttgggatgcattccagtttactggtgcaactgctgctgtcctgattggtttcatcttccctgccatggttatacttaggtaactaaattatgtctcgatgtgttatatattccctctgtgttcatgcattttcatattgacatataacattttggctttcttttttctagggatccttatggaatcgcatccaagcgtgacaagatcttggctgtaaccatgatcgtgcttgctgtcctctccaattctgttgctttatacagcgatgcaatgaatatcttccgtaaggaagaggaggcatgaatgtcagactccaaaggaatgtcatcaaatatcagtgatgaaggaagcgtggcttcatgttatgagacacagatgctgtgaagggaaattatttcctggaatccagcgaacgaagatttcttggtcagcggtcgaggttccagtcactcgaatgaattggatggttgaatctgcgtggcttctgtgcgaaccggctcaaattcgaattgagctgctcgcgatatctgtattgttagtgttcttgtatccacaagcaatgtatggctttaaaatgcctggtttacaataatgtacagtttcaaaaatacttcagatgagttaaatgtctatgtgaacctggactc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0633800, RefSeq:Os06g0633800