Os01g0357100

From RiceWiki
Revision as of 18:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0357100

Description

Ferredoxin-nitrite reductase (EC 1.7.7.1)

Version

NM_001049543.1 GI:115436499 GeneID:4326014

Length

6542 bp

Definition

Oryza sativa Japonica Group Os01g0357100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14589572..14596113

Sequence Coding Region

14590086..14590494,14594340..14594462,14594469..14594694,14594797..14595085,14595179..14595916

Expression

GEO Profiles:Os01g0357100

Genome Context

<gbrowseImage1> name=NC_008394:14589572..14596113 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14589572..14596113 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctccgcctccctgcagcgcttcctccccccgtacccccacgcggcagcatcccgctgccgccctcccggcgtccgcgcccgccccgtgcagtcgtcgacggtgtccgcaccgtcctcctcgactccggcggcggacgaggccgtgtcggcggagcggctggagccgcgggtggagcagcgggagggccggtactgggtgctcaaggagaagtaccggacggggctgaacccgcaggagaaggtgaagctggggaaggagcccatgtcattgttcatggagggcggcatcaaggagctcgccaagatgcccatggaggagatcgaggccgacaagctctccaaggaggacatcgacgtgcggctcaagtggctcggcctcttccaccgccgcaagcatcagtatgggcggttcatgatgcggctgaagctgccaaacggtgtgacgacgagcgagcagacgaggtacctggcgagcgtgatcgaggcgtacggcaaggagggctgcgccgacgtgacaacccgccggcagatccgcggcgtcacgctccccgacgtgccggccatcctcgacgggctcaacgccgtcggcctcaccagcctccagagcggcatggacaacgtccgcaaccccgtcggcaacccgctcgccggcatcgaccccgacgagatcgtcgacacgcgatcctacaccaacctcctctcctcctacatcaccagcaacttccagggcaaccccaccatcaccaacctgccgaggaagtggaacgtgtgcgtgatcgggtcgcacgatctgtacgagcacccacacatcaacgacctcgcgtacatgccggcggtgaagggcggcaagttcgggttcaacctcctcgtcggcgggttcataagccccaagaggtgggaggaggcgctgccgctcgacgcctgggtccccggcgacgacatcatcccggtgtgcaaggccgttctcgaggcgtaccgcgacctcggcaccaggggcaaccgccagaagacccgcatgatgtggctcatcgacgaacttggaatggaggcttttcggtcggaggtggagaagaggatgccgaacggcgtgctggagcgcgcggcgccggaggacctcatcgacaagaaatggcagaggagggactacctcggcgtgcacccgcagaagcaggaagggatgtcctacgtcggcctgcacgtgcccgtcggccgggtgcaggcggcggacatgttcgagctcgcacgcctcgccgacgagtacggctccggcgagctccgcctcaccgtggagcagaacatcgtgatcccgaacgtcaagaacgagaaggtggaggcgctgctctccgagccgctgcttcagaagttctccccgcagccgtcgctgctgctcaagggcctcgtcgcgtgcaccggcaaccagttctgcggccaggccatcatcgagacgaagcagcgggcgctgctggtgacgtcgcaggtggagaagctcgtgtcggtgccccgggcggtgcggatgcactggaccggctgccccaacagctgcggccaggtgcaggtcgccgacatcggcttcatgggctgcctcaccaaggacagcgccggcaagatcgttgaggcggccgacatcttcgtcggcggccgcgtcggcagcgactcgcacctcgccggcgcgtacaagaagtccgtgccgtgcgacgagctggcgccgatcgtcgccgacatcctggtcgagcggttcggggccgtgcggagggagagggaggaggacgaggagtag</cdnaseq>

Protein Sequence

<aaseq>MASSASLQRFLPPYPHAAASRCRPPGVRARPVQSSTVSAPSSST PAADEAVSAERLEPRVEQREGRYWVLKEKYRTGLNPQEKVKLGKEPMSLFMEGGIKEL AKMPMEEIEADKLSKEDIDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSEQTRYLA SVIEAYGKEGCADVTTRRQIRGVTLPDVPAILDGLNAVGLTSLQSGMDNVRNPVGNPL AGIDPDEIVDTRSYTNLLSSYITSNFQGNPTITNLPRKWNVCVIGSHDLYEHPHINDL AYMPAVKGGKFGFNLLVGGFISPKRWEEALPLDAWVPGDDIIPVCKAVLEAYRDLGTR GNRQKTRMMWLIDELGMEAFRSEVEKRMPNGVLERAAPEDLIDKKWQRRDYLGVHPQK QEGMSYVGLHVPVGRVQAADMFELARLADEYGSGELRLTVEQNIVIPNVKNEKVEALL SEPLLQKFSPQPSLLLKGLVACTGNQFCGQAIIETKQRALLVTSQVEKLVSVPRAVRM HWTGCPNSCGQVQVADIGFMGCLTKDSAGKIVEAADIFVGGRVGSDSHLAGAYKKSVP CDELAPIVADILVERFGAVRREREEDEE</aaseq>

Gene Sequence

<dnaseqindica>515..923#4769..4891#4898..5123#5226..5514#5608..6345#gaaccttatctccttctctctcgtcgctttctgcgtctccccgtctctccttcgccaacagccgagaagaggcagagagagcgccgccccccgtccctctctctccctctcgtcctcgcccccatccctctcgtctttcccttgccggcagcagaggaggcggcagcgacggcttcagctgctcccacgggccggatcgggcagtggcggtggcgtcggcggcttccgctggcgaatccggcgggtggatacaaatcagtgttccgataggtaaaaccctgctctcagcatctgcccttttgaattcgccaagagccagcatctgcccttttgaattcgccaagggccagcatctgcccatttgattttgaattcgccaagagccagcaacagcgcccccgcgccccctccctcctccgcaataaacagccacacgcgccgcccccatgtccaccctcatcgccacagcgcaccaccaccaccaccaccaccaccaccaccaccgtctccagccatggcctcctccgcctccctgcagcgcttcctccccccgtacccccacgcggcagcatcccgctgccgccctcccggcgtccgcgcccgccccgtgcagtcgtcgacggtgtccgcaccgtcctcctcgactccggcggcggacgaggccgtgtcggcggagcggctggagccgcgggtggagcagcgggagggccggtactgggtgctcaaggagaagtaccggacggggctgaacccgcaggagaaggtgaagctggggaaggagcccatgtcattgttcatggagggcggcatcaaggagctcgccaagatgcccatggaggagatcgaggccgacaagctctccaaggaggacatcgacgtgcggctcaagtggctcggcctcttccaccgccgcaagcatcagtgtatgcctctcttctcttgctcctctgatcaacacattttcttgctttcgttcggttatttgtcgcgccgaggaagttaattcgccaagatattctgcagttttttttctcgatgcacattcagcaacctaattaagactgattaagttgctgtgatttttatagcttaattacggtctcgtgggtaatgactatttatattgagtaaacatggttacctttgatccaatcacttcacctccatgtgccatatatagccacaggctctaccaagtaacactagtaatatgcctgtgatacgccacggtggcataataaatcattaaattttattataatcaaattaaggatcctaaaattggtccaattgggtgttaattcgatgcaggtcatataaaaatatattttaggcaaggtgcaattcaagagcatcaaccattatatccaatcactttaatatatatttgaagataacatatgtcggaaaaaaaatgatggagagctatttcattaacttgtgagcataaacagatcaccagatgatgccaccataagtcccgccacagtaagtgatgcagctcatcttgccctaggcgttcggtctaaccagtagatagaaagagtacaacatagatcgaatgaaaaaaaaaatctccagaagaaagctcaaccacattgagtaaattagagcaacaatcaaatcgagtcagcatatcgttatgttagcagaaccaatcaccacaatttgtttctcctctttatctaagtgttttgccaggttaaaagcatatatcactatgttccaagcaaacatcggcaatggacatgtcaaaaataaatgatcaattgtttctttgagtacaaaattgacaatggacactatgttcctttgttagaattctatttgtcagggtaggatgtagaaaaacttaacttttagaggaagcttaaatatccggcataaacttgctttttcagcgctctataaaataattcaacagtgaattgtccatcttttctaagtgctccaaaagacactaagttgaaaaaccaggtgaaccaacagattgatccacaaaatcttattattagattattcacttaaaagcctgtctttatttcaaacatataaaaacagaagttattaatcagggaagcgcttatggcagcctgagcgaaccagtgatagcaagtggtgaaaacagtaaataggatacataaaaattatacaaggtttctactgtttatcaaaaaaaaatatttgaaaacagtaaataggatacataatcgacttccaacttgtccttatcataacatccagaatcacaacaagaattgcaacgaatacatagtcgacttgagctaagaagtcacaagacctgtcaaagtaagctgcccttgatcttgaagtgaaaggcatattttattgtcttccttggcaaacagatatcactgtcttcagcagttcagttagataatccaagatttctcacggagaagagcatatcactcgcatcagtgttgtgccctccaaatactgagataaactgaattttgttctctttgaagcatctgcaggcattaacaattataatactttacaaagtttcattgggtctaaactattgtttgcacatcatatatatgcccagaactttttagcatgatacaagggtcctgttcataactcatgcctaaatctgacaaatttgtcaaacgacaatataagtcgaattataatgcgttttagaattgacgccaaaacttttgctagcgtaagtaactcttccacctcccagcatgcatacaaccaacaagctaaacttttgttcaaaaaaatgtacatttatttccttgaacacagcctttgtagaatatgattaaaaactcatggatgaatgaaataatgtaaaagaatggtcaaaatgatgaatagtacaagaagcaactgtgaacatttcacctttacctgactgttcgcaagaaggccacgtggcagaaaagccagaaatgcaagaagcttccctaattgatacaccatcaagaaatcaatggactcaacaccagcgtctgcccagacaaaatgaatgcaggcacctaaaatatagaaccattgacttttcaacactgaattatataacctgaatatcttgtttttttaacacatctgacaaaatcagtgcattctgttccatatagatgtatgcatagctcccatatgttagttgatcgatgagcatgcaaactatacacaccttacgttactccctctgtcaaaaaaaatataagcttgtctagatacatagctacaaatgcttatatttttggattctcttaaagctgtagaaacttttatcgccccgccatggcaagtcgagatgccatccccaatgaaagcccccacacaggtttcatgccctgctgcacaatattgagcaaccaaaaatataataatatttgtgtcagaatttgaatcaaccttacagatactgggtggccagaaaatctagtccaagtaatatcctgaaaaatagcaactggcaaatactaaaggcagtgaagagtttcctttagatcagatgataaaaaaaaatcatatgttcaatagcaataatcactcacattttttttgctgtttagaatttagataattagtagttaaacttctatagcttgcgtagctaagatcaatggtgattattagttgaaaaaataatcaaatcatcaaactgaggagacttatacctgccataagttctgaaatttcaatgatcctagtcaatatttactgtatatatagaattaggtccaaaagatgatacttacaattaaggatgttgtattgatcggttcataactcaagcttctatttatcattaatcaaaagctggatcattcatgcatatacctttgccgcactcaacgtagcagctcggagtcttctttgttcagaagcgaggaaggagtcaacaaataagtactgcaatgttaaacaaaccgacatatcaaatcccaaattaagaatgcatgatttattaatacaggaaatatatgatcaagtcccaaaaagtgagtcatgttatgtacactcagtcatcaatttcaataagaatattaacttgctcattggtatatggatttgattatgacataatttgacaatacatttacagaataaacttgcagtgctgtgagcatatgttactaacatgtaaggaccttgttttgctctgttcaatactcatgttgatcttgatctgtgtccacatatacctaaatgaaatgaaatcaaagaatgaggtttgtaggagtggagttggtgaattatagggtagataatgtcggcacaaccgtttgataagtagtacgagtactttatttggcgccaccgcgccagcatcagatgtgtggcctttgcactgattgaatccaaaagaaaaaaaaagtcgttttggtcccacacaattctacttcatctgcaggatgtacagaaggttacatatctattctgttctatgctctgtttacatttatatttatagtactaggttgaaagggctcacttggtggctgtcattggttggctggtgcggtatattactaataggttttttaatggcatatatgttcttaaaataaaccagaaaagcaaaagatcaactatcttagccacaccaatgaaatggaatatactgaactgtcacggctaaaattctcttcagtcacctggcccaactggagccgtgggctcgtcgtcttttctaaacatgtactagtattttgggggcccacagtgaatttggcccaaaatgctgacagccgctctacggctctacgctgtgcagatgggcggttcatgatgcggctgaagctgccaaacggtgtgacgacgagcgagcagacgaggtacctggcgagcgtgatcgaggcgtacggcaaggagggctgcgccgacgtgacaacccgccagaactggcagatccgcggcgtcacgctccccgacgtgccggccatcctcgacgggctcaacgccgtcggcctcaccagcctccagagcggcatggacaacgtccgcaaccccgtcggcaacccgctcgccggcatcgaccccgacgagatcgtcgacacgcgatcctacaccaacctcctctcctcctacatcaccagcaacttccagggcaaccccaccatcaccaacctgtgagtgatcgaatcaaattgatcatgctctgtgctgtgctgtttcgtgtcgtctctgacgacatgtttgttgaatttgttgttgctgcgtgctgttggcaggccgaggaagtggaacgtgtgcgtgatcgggtcgcacgatctgtacgagcacccacacatcaacgacctcgcgtacatgccggcggtgaagggcggcaagttcgggttcaacctcctcgtcggcgggttcataagccccaagaggtgggaggaggcgctgccgctcgacgcctgggtccccggcgacgacatcatcccggtgtgcaaggccgttctcgaggcgtaccgcgacctcggcaccaggggcaaccgccagaagacccgcatgatgtggctcatcgacgaacttgtgaaccatttttttctccattcatccacgccattgactgaattacgtatgtcccaatgttcttatcagttaattgcggtgttggcattgcagggaatggaggcttttcggtcggaggtggagaagaggatgccgaacggcgtgctggagcgcgcggcgccggaggacctcatcgacaagaaatggcagaggagggactacctcggcgtgcacccgcagaagcaggaagggatgtcctacgtcggcctgcacgtgcccgtcggccgggtgcaggcggcggacatgttcgagctcgcacgcctcgccgacgagtacggctccggcgagctccgcctcaccgtggagcagaacatcgtgatcccgaacgtcaagaacgagaaggtggaggcgctgctctccgagccgctgcttcagaagttctccccgcagccgtcgctgctgctcaagggcctcgtcgcgtgcaccggcaaccagttctgcggccaggccatcatcgagacgaagcagcgggcgctgctggtgacgtcgcaggtggagaagctcgtgtcggtgccccgggcggtgcggatgcactggaccggctgccccaacagctgcggccaggtgcaggtcgccgacatcggcttcatgggctgcctcaccaaggacagcgccggcaagatcgttgaggcggccgacatcttcgtcggcggccgcgtcggcagcgactcgcacctcgccggcgcgtacaagaagtccgtgccgtgcgacgagctggcgccgatcgtcgccgacatcctggtcgagcggttcggggccgtgcggagggagagggaggaggacgaggagtaggaacacagactggggtgttttgcttgctccggtgatctctcgccgtccttgtaaagtagacgacaatatgccttcgcccatggcacgcttgtactgtcacgttttggtttgatcttgtagcccaaaagttgtgttcattctcgttacagtcttacagaggatgattgattgataaataaagaagaaacagattctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0357100, RefSeq:Os01g0357100