Os06g0636300

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Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0636300| Description = Conserved hypothetical protein| Version = NM_001187993.1 GI:297725116 GeneID:9266903| Length = 8422 bp| Definition ...")
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Gene Name

Os06g0636300

Description

Conserved hypothetical protein

Version

NM_001187993.1 GI:297725116 GeneID:9266903

Length

8422 bp

Definition

Oryza sativa Japonica Group Os06g0636300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26732412..26740833

Sequence Coding Region

26732412..26732474,26736300..26736486,26737145..26737350,26737489..26737614,26740171..26740833

Expression

GEO Profiles:Os06g0636300

Genome Context

<gbrowseImage1> name=NC_008399:26732412..26740833 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26732412..26740833 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacaagattgggagtgggatgtacgtgtccgggccggcgccggacagggggaaggagcggcggcagctgtcgtcggggtcggtggcgacgccgccgtacaccggcggggacgtgtcgaggtcgggggagctggggcggatgttcgacatcggcggcgcgggggtgtcgccggcgtcgtcgcggcggagctcggggccgctgccgaggcccctgccgttgctgccgtcgccggcgtccggcccgctgtcgcagctctcgcactcggggctgctcgtcgggccgtcgccgccgccgccgccgccgcagacgcagcagtcgccggcggggtcgtggaggaagtcgagccggaggcgggaggaggccgcggcggcgccggaggcggcgcgcgggcgggcgaggctgggcgtgtcggtcgcgtgctacgtggcggcgagcgtggccgccacggcggggctcggcgccggggcgttcttcctcgtggcgtggcaccggtgggaggtgctctcggcggcgggcggcgcggtggccgccgtcgcggcggcgttcgcgtggaacgtgcgccggcgcgacgccgaggcggagaggttcttccggcggctgcccgacacggtgttcgaccagagcgacatgcccatcggcgagctcgtcaagatcaccgggcaagtcacctgcggccaccaacctctcggggcacgcttccacgacgcagcccggtgcatcttcacgtctgtgcagctgtatgagcgccgtggatgctgcttccggtggcaacagacacactctgagacacggacggcgaatttctacatctctgacaggaacactggaaagaggttctacgtgagagctggcgagggtggcaagatcacctggatgattaagcagaagacggacagcttagatggcgagaggaagggagcatcaaggaacctcaaaagctggatggcaagcaatgatttatcgtgtgatggcactgtgcatgtcaaagaagggttcatcagggaaggggacactgctagtgtgattggagtcctgaagaagcaccacgcctacgacatcgtcgacgcgccgtccggcgtggtaaccaccggctgccagttcacgaggtgtatgtttccagtccacgtcgagggtctcatacttgtaggagacgaagacccagatgatgaagtttatatgcatgggggacagacaggccacggcgtggtgaaagtggatctgcaacagttggctgcgccttga</cdnaseq>

Protein Sequence

<aaseq>MHKIGSGMYVSGPAPDRGKERRQLSSGSVATPPYTGGDVSRSGE LGRMFDIGGAGVSPASSRRSSGPLPRPLPLLPSPASGPLSQLSHSGLLVGPSPPPPPP QTQQSPAGSWRKSSRRREEAAAAPEAARGRARLGVSVACYVAASVAATAGLGAGAFFL VAWHRWEVLSAAGGAVAAVAAAFAWNVRRRDAEAERFFRRLPDTVFDQSDMPIGELVK ITGQVTCGHQPLGARFHDAARCIFTSVQLYERRGCCFRWQQTHSETRTANFYISDRNT GKRFYVRAGEGGKITWMIKQKTDSLDGERKGASRNLKSWMASNDLSCDGTVHVKEGFI REGDTASVIGVLKKHHAYDIVDAPSGVVTTGCQFTRCMFPVHVEGLILVGDEDPDDEV YMHGGQTGHGVVKVDLQQLAAP</aaseq>

Gene Sequence

<dnaseqindica>8360..8422#4348..4534#3484..3689#3220..3345#1..663#atgcacaagattgggagtgggatgtacgtgtccgggccggcgccggacagggggaaggagcggcggcagctgtcgtcggggtcggtggcgacgccgccgtacaccggcggggacgtgtcgaggtcgggggagctggggcggatgttcgacatcggcggcgcgggggtgtcgccggcgtcgtcgcggcggagctcggggccgctgccgaggcccctgccgttgctgccgtcgccggcgtccggcccgctgtcgcagctctcgcactcggggctgctcgtcgggccgtcgccgccgccgccgccgccgcagacgcagcagtcgccggcggggtcgtggaggaagtcgagccggaggcgggaggaggccgcggcggcgccggaggcggcgcgcgggcgggcgaggctgggcgtgtcggtcgcgtgctacgtggcggcgagcgtggccgccacggcggggctcggcgccggggcgttcttcctcgtggcgtggcaccggtgggaggtgctctcggcggcgggcggcgcggtggccgccgtcgcggcggcgttcgcgtggaacgtgcgccggcgcgacgccgaggcggagaggttcttccggcggctgcccgacacggtgttcgaccagagcgacatgcccatcggcgagctcgtcaagatcaccggggtgagcaaccttgccatgcatctactactcatcttctcatcaaaatcaaatcaaatcaaatcaaattaactgttcagcttgcagcaattctatcgttccgaatgcaacatctctctgtcagtgtccatccatatcgaaaaaaaccgcattattttttagaagaaccgcatggtcgtgttaattattttcgtattgggaaacgtttgccgttgcaaattaaattaaataatttggaagctgatgcggcgtttgcgggcgttgctgaagtcgccggtatgctgtgttgcttgcattcggcttagcttaatccacaggcccaaattgttgcttgcatttggttatgcgtcagaggatgtcaaccaatgtcaaaatggctttaaactcccatgcgctgtggtcaatggcttccttgtggaaggcatggtaccaaaccacttttgcttcacctaagtttgctttgctatctatcttattactactactattttcaattctataattcttgatattttgaacaatgatacggtcaccaaaatatatcttttgactatttgctttctactataatatatacaataaataaatatattttttatttttattatagtactttgtaagacgaatctatatatgttgttctgatacctttaaactaaatattttaaaaattattgataatcaaagttataaagtttgacttcaaccatatccaaaacatcaaaaattatagaactagaggaagtattgctctgcaagcaacaacaaacaaataaaacaggaagaatccaaataaccccaacaagtcagtggtctttccaatccccttctcaccgcaatacgtaacactcccacaagttcattttctctttcaactttccacctctatctagttttggcattttctcgtgccctgtgggccttcattgtggttaaggtaagttgtcccttgccaccaaagatactattcctttttgctttcgattttctatgctttaatttcatctaatatacagcgataaaacacgatgattaccacataatgttagataaggtgtattaaatctcatgtccaataagagagaacataggtgcaatttcccccaccatgctggaggtctatagaatgtgaaaaatcgctaaggagcacgacgaaaatgactaaaaactagacatgggggagagttgaaaagaaaatagacttgtggagagttttttcttacgaaattaatttgtagggggaagattgaaaagactaccactgcatgtgtacatattggtgaaactactcggcatgtttttgttgatatgtcatctcgagacttgttggtatgctctccaacgaacgtgtaacgaatattactcatttagtcatttaaaatttgcattgttcgtctagtgtacttaaaagtttaagctgaaagatgactatcacggagaaatcacttgtggccactgacatctcggagatcactttatcatgtttggaactggtgggccataaaattcatttccattatattaccgtttcatattcattttattataggtctatatatgcatatatatttgttttcgattttggaagaatacagaaaatcaaattatgtaagaaaagaagtaaccacctatacatatatttcctgatctttctaatatataatatatgaacttccacacctctcaatcttgagagtagtaccagctgaaacaaattttatttttcacatgtaaaactcttactgtatcaataccagccaaattctaattttcacatgtaaaactcttactatatcatcaccagcgttctcctccacatctcttaacatagcaaatatgtgagagtataaattggtttactcaaatatcttatctttttattttctaaccgctatttctcccaaaccaatatttctttatttcctccccgctactccacagaaaccataaaatgcatctccctgttgttgctcccaaaccatacatgtcctgatgcctatacgaattctcgatgactggatcaattaatttatagtgctgaataacataataagagagagctcatgctgggacatgttaagctggtataccatggaagttctgatagtgtaacgagtcatgccttttggccccgttattttctgtttgctgcgccttctgttaggttaatccacaggtccaaatttttccttgcatttggttatgcgtgaatgtcaaccaatgtcaaaatggcttaaacttccatgcgctgtggtcaatggattccttgtggaaagcatggtacaaaaccacttttgcttcaccaagtttgccttagacatcttaccaccgttccaccctgttttgcaaaataaataaaaaactaaaataaatagataaaaaaacagcatgtgtgcatataagcttattgctgaaattagtctggatctttattgatggaatgttgaaacttgttggcatggtctactacgaatttgtaatgaagactatttagttgcattgttcatatatatatggcttacttaaaagtttaagctaaaacatgactatatcacgcagcaagtcacctgcggccaccaacctctcggggcacgcttccacgacgcagcccggtgcatcttcacgtctgtgcagctgtatgagcgccgtggatgctgcttccggtggcaacagacacactctgaggttagagctagcagagttctgcatgattttctgtcagttcatcagttttagaaatggttttgggtagggttgtgaatagtgtatgtatatggcggtgatgcactgaggtttctcattgattttacttgcaatttgcagacacggacggcgaatttctacatctctgacaggaacactggaaagaggttctacgtgagagctggcgagggtggcaagatcacctggatgattaagcagaagacggacagcttagatggcgagaggaagggagcatcaaggaacctcaaaagctggatggcaagcaatgatttatcgtgtgatggcactgtgcatgtcaaagaagggtaaggtgctgatgctttagagaatgacaatgaaaaaaacccgtcaatttgaacatcataaacctattttataggttgaatttttgaaattttcaaataaaattctacaccatagtaaggttttatttacagtatgtagtttttgaaaattgaaaaatacctcaaacgtaaattaaatcattgtaatcaacatcaggatataaaatatatgatagtgacggtttgaactgaaaaaaaagagaagaatcataggtgactcgaacggtcgtggttaaaatacatgatagttacggttggaactgaaaaaacgaagaaaaaaatcataaggggtctatcaacggcggtggttagaggtatttctatattctatcaagaatttgtttgtttgatttccttaaatatctgagcatacaaatctcaacatgccattcatctccggtgttaacagattatctctatgtttgaaaacaactgatactattccatattatatataactcaacggtaaattactgactaaggtcgtgagatttcatccgcataacactattcctgtgctgcatgtaaagttcagatcacaaaaaagctgtgcccgcaaacttgcattgacatttgcatcacacaattttttcattggggatcacaacaaattcttcaggttcatcagggaaggggacactgctagtgtgattggagtcctgaagaagcaccacgcctacgacatcgtcgacgcgccgtccggcgtggtaaccaccggctgccagttcacgaggtgtatgtttccagtccacgtcgagggtctcatacttgtaggagacgaagacccagatgatgaagtttatatggtctgacgaactctgaacatacaaatattcctctgctgctttgcacaaatcgcatgcaaaaaactggactcccatggctccaacaacccactttgcatttcggttcacaatgtgatttggatcttgtgtggttgtgctatatactcttattcgtttttcagaggtttattgtagactgtagtgaatgaggatgttttagtacctcgaattttagttacagttgtgtaaattaaattgacacttacaggcttgccagttgccagtaggacaatttgaaacatgattttatttgataacttagtgaggagggacacaagaattgcagatattccatacaaaggtttacttttgagtagcatactcagaagtcatgtaacaattgagcatatttcactatccgattagacttaatttcatatagaaagcttcctgtttatgtttggagatggaagagggtttccgtaccatttgaaaaacagtgaacatgttataaatgttgcaaaaacaccaacaaagattacaaaattttactgttcgagaaatatatgttcctgtcaatcccattggtacctctagtaccctacaaaattctctagcagcggcacacctgggaattgggagagtttccctggaaactgatgcggcaatggttaaacaagtagtaatatctacagactacgatctcttcattcgcggtggcttggcccttgaacaactgttggtaacaaattttgtcaatattcaggttagacttatgcctagaatgtaacagagtagctcatgtgttagctcagcttgggactgtttgcctggctcagtctgaactagtactggttgatattccagatgatatctcggatcatgagtaatgaaatgtctaaaaaaactgcaaaataatactagtaataacagaatagcccaccaaacttctcttggagttttctctgcattcatttcactgccctgctgttgtaatgcattctagttggctactacatatcattacaggcttaatagttttatagacaatgataagctggaaaaagtatttggtaaaaatcacatcttgggtaaaacttttttataagttctaaaaaatctcaaaaaaaatcatacatgtaggtaatatgtaaataaataaccatacgaaactatttcacgactaaactcaacttcattaatgaagtatgaaattaattaataacactattcctgttgttgttttcttttttttttatgtttctcaattttatatctcacaaatgaagttgagtttaacctcgatactactatctgcagatattaccatatactatccaacacagatgttagaataggtgttgaatatactagttctattttggttatagttagacttggggttgtaataggtggtagggggtggagttagagttggactctgtaactcgacatctctcttaaatggagaggaggtggtgaccatggcgactacaatgtagcgtagacacgcagggagatgatggccgcgtggccattgatttgtagtggctaggagatatattgattggggaggagcgcccataatcaaagcctcggagatgtaggctttggctgaacttcgttaacaaatatcgtgtgttcctgtgtcgtcatccggtgtgtcttgggtgatcaatgactgaagcgatcaagaaggttagtcgtcgttttgctatatcgactaacttttataatgacagatggtcgcctgacgtgctcttactctacatgtgactttgttgacaaagagatggcaccgagtgtaagtgtcgtcatcctgcaggtcatagttagctaacttatctgtatgtgattgattatgcaggatatccgaagctgaatgcctaaaaattttccttgagagcatggaattattgttttagacataaggtttttaacgaggcaacaacatacaatgtatgagcgacactatgtacttttcctcctcgtctttttctcaactattgggttttggtaggagtttcgacgagtcattcgttgatcacggttagatcatggaagagtgctgtaaaacaaatctataggagatatgtttcttgtggtctcgtgggcatatccaaaacaaagtatagatagatttatcttctttcatataaacgtgtaggggtggggtgagacctgagacgtttgggtaattgtatccgagaacagatttaataaaaagatttcatcctaatgtgtccatcatctacttatgttagatggatattctcccccaggatggatattctcctctaatgttgtggcaggatggatattaatgttgtggagtgtaaggaattgatttattaattgtctaatagaccgcgaacggattatggaaatcatggaaaaaagtcacatcaacatcttcgagtgatacttgattagttataaggataggtgacaattccttctattgtgcaaaacttttatttgaattctcatatctggtacaaattctgtcacattatgcacaatagattctatgatcttttatttgtttgttaggtcgtttatggatactaatggtgttatttatggattatgtctgagtcggtaacgcgggagcacatcctgtttataaaagcaaatataaaattcattcatcaaaacctggttcctacaccatcaccattatttttagttagattttgcgatgggtaaagtaagtaaacatatatgttgctttgctcaaacatctcactttttttcctctaccatcattgcattaccatattctattcatctcagcaaccatgttgtttaatttatagtgctgatcaatcagcgagaggtcactcgtttggcatgatgcatacaaagcaataaatgagtatgatattgtaaggaaccgtgctttctttcttcttttaactcaattggttttgctcaatggtgtctgtctttcttcttttaactgccaaaccgtattagcaattggttttgctcaatggcgcctgagcagagtaggcaaatcatcgcagagctgtagagggaaggcggatagtaaaagccaccacatgtacaccggccatgtgattcctctcgcagcaccattctgtgcaccccattcgggcgattgatcgggtaggatatctaagttaaatacttttttttctatgggttctaccaacctacaaatgctggttagagaaaagtaaaatgtcttggaatttattttttagaacatgtgggaatttaatttgagaacctatatatataccacaatacacgttagcaaatatataccatttatttataatgtttatttttattaaacacaaaacaactttattggtgctataatatattacaaattatataaaaaatatatctaacatatccataatatcaaacaatcgatttacagggacaatcatgtatggaaataataatattggtgatatggaaaaaacacaaatatcattaacgcgggaaccatccgtaatatataacgactgcgctgtcgttattacaatatctaactacataaatctttgcgatcattaaattggtttcctcaaatatttcaaactcactagcttccataaagctattgtttctcgtgcatttatgaacttgtactaatttttcttggtatgatggttcctacgcttcgtttgattgacagtccacttaatatagcaaagcacggtctatgttaaagctggtaaagcatgaaggcaacgagcctgatactgtgttgagtcatgccgtttgccttttttgtcttgccaattcctcactgatgctgcatggtatgcgtggcatttgcgcgccaatgtgcaattgtagttgtagcatgggggacagacaggccacggcgtggtgaaagtggatctgcaacagttggctgcgccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0636300, RefSeq:Os06g0636300