Os01g0375500

From RiceWiki
Revision as of 18:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0375500

Description

Dehydroquinase class I domain containing protein

Version

NM_001049615.1 GI:115436643 GeneID:4325446

Length

3432 bp

Definition

Oryza sativa Japonica Group Os01g0375500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15739900..15743331

Sequence Coding Region

15739900..15740225,15741466..15741529,15741630..15741735,15741824..15741964,15742281..15742429
,15742786..15742951,15743318..15743331

Expression

GEO Profiles:Os01g0375500

Genome Context

<gbrowseImage1> name=NC_008394:15739900..15743331 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15739900..15743331 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaaaaaggtttaatgtcaagggtgttatcccccaagtttgggggatatctaacctttgggagtcttgatgctacaaaggtatcagcacctgggcagccaaccgtcgaagagctgatagacatttatgatataaggcgcataggacctgatacaaaggttctcggtgttatagccaacccagtaaaacagagcaagagcccagttttgcacaatacatgtcttcaatctgttggatacaatgctgtttatcttccacttttggcagacaacattgctagatttcttagcacatattcgtctccggatttttcaggattcagttgttctcttccttttaaagttgatgccgtacagtgttgtcatgaacatgatccagttgctaagtcaataggtgccataagcactataattaggaggccagatggcaaactactgggctacaataatgactacattggagcaatttgtgccattgaggatggcataggaggtccaggatcaaagaatgctgccgtcacacctttggctggcaggcttcttgttgttgtaggtgctggtggagctggcaaggcaattgcttacggggcaaaggagaagggtgcaagaattgtagtagcaaatcgtacctacgaaaaagcagtaagtcttgctgccgcggttggtggtcatgccctgagattagccgagcttgaaactttcaggcctgaagaagggatgatccttgctaatgcaacatcgttgggaatgtaccccaatgtggatggcacccctattccaaagcaagcactaagcttctacgatgttgtgttcgatgcggtatatgctccgaaagtcacccggcttctacgagaagcagaagaatgtggggttaaagttgtcagcggtgtggagatgtttctcagacaagccttgggtcagttcgagcgtttcacaaatggtattgaaggatttgattcttag</cdnaseq>

Protein Sequence

<aaseq>MGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIY DIRRIGPDTKVLGVIANPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSS PDFSGFSCSLPFKVDAVQCCHEHDPVAKSIGAISTIIRRPDGKLLGYNNDYIGAICAI EDGIGGPGSKNAAVTPLAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSL AAAVGGHALRLAELETFRPEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVY APKVTRLLREAEECGVKVVSGVEMFLRQALGQFERFTNGIEGFDS</aaseq>

Gene Sequence

<dnaseqindica>1..326#1567..1630#1731..1836#1925..2065#2382..2530#2887..3052#3419..3432#atgggcgaaaaaggtttaatgtcaagggtgttatcccccaagtttgggggatatctaacctttgggagtcttgatgctacaaaggtatcagcacctgggcagccaaccgtcgaagagctgatagacatttatgatataaggcgcataggacctgatacaaaggttctcggtgttatagccaacccagtaaaacagagcaagagcccagttttgcacaatacatgtcttcaatctgttggatacaatgctgtttatcttccacttttggcagacaacattgctagatttcttagcacatattcgtctccggatttttcaggattcaggtactaatttcaaaaagtagaaataattactttactatttcttggaattggatggactaattttttctaggagttggatatactagatttaagtggtattgactctcaagggaccacatgaataaggattgttgtaattttttgataaatcatacatgagggatcccccaatctgatgtcttccttagacaaacctcattcgtacaaacctcacctaatgaatcccttgttagttttcatgggaaaaattcagctatatatatttttcctggcagctctttgactgggtatgaataattggtttgtacagtcatatcatcactgactgtccacatgtgacatactcaaattgtggaaatcacagcgaaaaatccacacaaaaaacccacccaacccgcagttagagcatcaccaagagactctccatccaactctctaagctaaattttagccaacatagcaaaaaatagtactgaacatgtgaaacggccactccccctcccttgtctaggtctgttactgtgattcttttacatttcccttgatattctaacatttacagagtacttactgaacatagctttgcacatatttttacaaatatatggaaacaactccttaaaaatgaactgagcctacatctgattatgcttagggaagatgacagacccttgtttgaatcatggataattacttgtaatctaggtccctctgcgatgtttttaatttatttcccttttgtaaataactcttttatataattgaaataaaccataggggcttttccactgtttgatggtaaaaaattttttaaataagttttgcacattctgggagagagctcagaatagatattttagtttgacggtaaacaagaatccagtttgctgaaagtaaccagacttttggtaattcagatgcacaaagtcatttttgtggaaagccttctgttagtatatagttcctctgggtatggaagatgaaacattgaccactcttttctattttaatatgtctgttgattccaatagagttatgatgtaatgaaagcactgttcaagacacatctagaaatctgattttcatataaatattcaaatatacatcgatgtatttaattatacgacgattctagttttagttatttgacttgatgtatgttcaaactactacttttgacaactggagggggtatttcacaagaacaaatttgagcggtatatgactttatgtaatgcagttgttctcttccttttaaagttgatgccgtacagtgttgtcatgaacatgatccagttgctaaggtaccttgatgtgtggtacactttctctaattgcttacttgatttaattaattacttacctttttagacttatttaacctgacatttcttcaatctgcagtcaataggtgccataagcactataattaggaggccagatggcaaactactgggctacaataatgactacattggagcaatttgtgccattgaggatggcataggaggttttttataatcttaatcctgaaacaatcgttcaactgttttttcggagtcatgggaaaaaagtagctgataatttacatttcacaggtccaggatcaaagaatgctgccgtcacacctttggctggcaggcttcttgttgttgtaggtgctggtggagctggcaaggcaattgcttacggggcaaaggagaagggtgcaagaattgtagtagcaaatcgtacctacggtaaggttttttttgtatttgtttctgagacaaaatgttctatgttggctgcagttattcaattattcatatgcaaagcataattcattttattagtgtaaagtattggaagttctgtactcattatgccgctcagacaatgatcaatgctgaaatatgggaagatatattgcatccatttatatccatgtttgtatcattgtcatgggtgatttttgttccatcaattcttgtttcgcactagttataaagctcaaagctgatcatatttgagtacgtacatcatttaatatgataattttcttgtgttcttcagaaaaagcagtaagtcttgctgccgcggttggtggtcatgccctgagattagccgagcttgaaactttcaggcctgaagaagggatgatccttgctaatgcaacatcgttgggaatgtaccccaatgtggatggcacccctattccaaaggtctctttcttacacgcacgccatgttaatattctgtaagacggaatatactcaacacaataatctattgccagatagcgggagtacatatataggttaggccttctatatctctaccaacttataaaattagaatcgggagtacagaaggaatccgaacctaattacaggaagtagcaataacaaactcttaacatatatattccagctataaactggtggaaccctcccttctactctgttaccatctttaatttcaattaatcttggcatgctctctaattagcacatttgatactaccttgatatacctgtccgctcattgcggccacaatattttccatttgtatgtgcagcaagcactaagcttctacgatgttgtgttcgatgcggtatatgctccgaaagtcacccggcttctacgagaagcagaagaatgtggggttaaagttgtcagcggtgtggagatgtttctcagacaagccttgggtcagttcgagcgtttcacaaatggtattgaaggtattgtgtccttctaacttatatcatacactttgttatgccaaatgctatcacccattcctctttctgataatctactttctacagctcctgaaagcctgatgcgtgaggtattagcaaaacacacataacaggttcgttcttcagcttttgccttttcatttctattcttctagtcgtagtgatgatggtttagtatatttattagattctgttgtatcatttgcattgaagacgttctctaacaccatgccaaaaccacaagggcaagatgtttttgtaaaccaactaaccaaccgatagaattaatatagtttaaacgccaaactatatataatgccaataatgtttaactattggttgtaggatttgattcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0375500, RefSeq:Os01g0375500