Os06g0638900

From RiceWiki
Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0638900| Description = Conserved hypothetical protein| Version = NM_001187995.1 GI:297725120 GeneID:9266130| Length = 3451 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0638900

Description

Conserved hypothetical protein

Version

NM_001187995.1 GI:297725120 GeneID:9266130

Length

3451 bp

Definition

Oryza sativa Japonica Group Os06g0638900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26840881..26844331

Sequence Coding Region

26841343..26841380,26841483..26841984,26842062..26842085

Expression

GEO Profiles:Os06g0638900

Genome Context

<gbrowseImage1> name=NC_008399:26840881..26844331 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26840881..26844331 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcattttgatgtttcagcaatgaagaacaagccgggaaaaatttctgccgcgtcaaccacacattctgttcttccagtgccggtaccagcagtaccatatgctgccccctcaccttcatacgcactaccccctgcaggataccctgcagtaccgccatatcaatcctatcctgctagccatgtcccggcgccatatcctacttcagcatacccacatccaccaccatctctgctagctcgcgatgttgagcatgcggcataccctcctacaagtacaacatatcctccacagccgtacccaccacagccgcagggacaaacatacccaccgcagccgcagggagaaacataccaaccgcagccgcagcgagaaacatacccaccgcagcctcaagtacaaccatacccaccaaagccacagggacaaccatacccaccgcagccgcagggacaaccatatccaccgcaaccatatggacaaacttacccaccacctccaaaaggacagcccacatatccacctgcgccctatccttcaacttatccaccagcaccatattga</cdnaseq>

Protein Sequence

<aaseq>MHFDVSAMKNKPGKISAASTTHSVLPVPVPAVPYAAPSPSYALP PAGYPAVPPYQSYPASHVPAPYPTSAYPHPPPSLLARDVEHAAYPPTSTTYPPQPYPP QPQGQTYPPQPQGETYQPQPQRETYPPQPQVQPYPPKPQGQPYPPQPQGQPYPPQPYG QTYPPPPKGQPTYPPAPYPSTYPPAPY</aaseq>

Gene Sequence

<dnaseqindica>2952..2989#2348..2849#2247..2270#atgtcgatacaaggccagatcctcgaagtcagaggtgaccccgagagtttttttcctcgctcaattccgaatccgaatttggcggcggcggcgtctcacctgtgtggctttcctgtgtttttctttctttttttggggtgttttgtccatccgtcatcagtcactgggtgcaggaagctgagggacacggagttcttcacgcggcaggatccctacgtctgcatcgagtatgccaccaacaagttccgcacccgcacctgcaccggtaaagccccctctccatcttgttagtgctttgagctgtgaatcgtgaataaacccgagttcggtagcggcaatccaggaagaaccgctagggttttgagctttgaatcgtgatgaaatacactcgagaattggggtagtgtttactgtgcgttcctctgtcaatgccgtcattgttttgttgcctttcgggcggcactcatccgattgccttgagtgattggtaccaaacatggtcgttcttcctttgttcatgggaatggggtttgctcagttttgctttgaaagagcgatggcgaattggtcatggttggaatagttagctgaaataacttgtgaagtagtaccttgctgactatttccctagtttctatgtggaccatgtattagatgcgatgcgccatagtgttcagattgttctttacaaaattagatgtgccatggcgtttagctcgtttctttacaaaattagaggtggaattatgccacctttacctttgtgttattccttccacataaaggcagtcctacacgcttgtggtatccgctacttattgcttctcagctccatcatcttaactctttctttttttatcaaaacaggcaaatgctttgcgtcatttaacaataggaagattaaaaaaaataacaaagataaaggtgtacaccattctttgcctagttttcttgttgacaacagcagaataacaaaagtacccttgctagtggaatttaggagcggtttcttagggtactatgatgattagccattgcacaagtgtcttttcaggctaaggaaattaccataatactatgtggtacaaaaaagaaattctgaaccatgttaccttattatcagaatttaattgctaccagtacaaggctaataatcaacaattgggattgtaatcttgttcccttctgtaaagtctgccagttcctgacatgtgttgggtagtgctttcatgcttttggaaaaataaagtcacaaatggaaagggaaaaggctcctataagagtgatatgtattccaatctttctggtttagaagttgagaaattcaacttttttgtttaaatggggaaattgctgcatacccacatcctagccttacaaaccccaacaaggagtttattaggttatatgtgaattttagaggagtgtgccattaagaccaatttttatgttgttcttatactatacaaagtttagaagagtgctgaagaatgttttcccccatttccagctaccttacaagtactgtgctacaactgaaaatccaggcactagctgccctaaacagcattttattatagtacaaacttcgagttaatatagtaattgtcaggaagttttccaaatacggcgacatgttccttattcaacttccaaggggttcttagctctgtactatgtaataatgaaatcaatcatcaaatgccctttcctgagtggagtctaggataatattcatcttgctgatattttatatccatgcgcttcttattttctaatacaagcatccttctgctaaactgagcttcatcgtgccactttctctattctctaccacaatccagtgctatactttttttatatgaatataatgtttctgccagatgggggaaggaaccctacttttgacgagaagtttcatatacctctcattgaggggcttcgtgagctaaccgtcacagtgtggaacagcaacacgctcacccatgatgatttcattggcaatggcaggtttgtggacctcaattacgcccatttggtgattactgttcttaaataactgtccactgagcctttttgtagggtgcagctgcataaggtgcttacgcgtggctatgatgatgcctcatggcccctccagacacgccatatgaggtagtcgtatttcttttaccttgtgctcattgcacttgtgaacttcctgatagtagtgtatcttcaggtctgctggggaagtgacgctcattatgcattttgatgtttcagcaatggtgagagactggttaatctttgctgccttattcttgttggtatggcattgcctcatgggttttcttatgtgcaccagaagaacaagccgggaaaaatttctgccgcgtcaaccacacattctgttcttccagtgccggtaccagcagtaccatatgctgccccctcaccttcatacgcactaccccctgcaggataccctgcagtaccgccatatcaatcctatcctgctagccatgtcccggcgccatatcctacttcagcatacccacatccaccaccatctctgctagctcgcgatgttgagcatgcggcataccctcctacaagtacaacatatcctccacagccgtacccaccacagccgcagggacaaacatacccaccgcagccgcagggagaaacataccaaccgcagccgcagcgagaaacatacccaccgcagcctcaagtacaaccatacccaccaaagccacagggacaaccatacccaccgcagccgcagggacaaccatatccaccgcaaccatatggacaaacttacccaccacctccaaaaggacagcccacatatccacctggtaagatatggctgagcagacatgaattcatccattcacatagcattagtcaataactaataaggtaattaatctctgtttaccatgatggatcttatgcagcgccctatccttcaacttatccaccagcaccatattgatatggcacacttggtggactgaagttgtccacatacaaaagcaagtaagcaacaagtgatgatcagttcttatatttatccagggtatccagccttcatcatccagttaattgaaacaaatgaaatcattcctgaagcgattcatgtcaacatcttagcaaccaatggtagtagttaccatctggtatgtatcatatatcatagcttgcagaatgtcacgaatggaatttgttcgattatgttgtatgttttgggcttgttgtaacagtgatccacctttgttctgttttgaggtcatgtttggctgttctgtgactgtaactactgctttttacaaaggggggaagcagtaattctagttctacctgcaactgcctgataagtgttaactgtgaaaagttgcagtagcttgtcgactttgtaccatgttgtttgagatgctcaataaatttgctttgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0638900, RefSeq:Os06g0638900