Os06g0639500

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Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0639500| Description = Protein kinase-like domain containing protein| Version = NM_001064695.1 GI:115469121 GeneID:4341621| Length = 3879 b...")
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Gene Name

Os06g0639500

Description

Protein kinase-like domain containing protein

Version

NM_001064695.1 GI:115469121 GeneID:4341621

Length

3879 bp

Definition

Oryza sativa Japonica Group Os06g0639500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26880185..26884063

Sequence Coding Region

26881142..26881507,26881605..26881696,26881971..26882444,26882734..26883694

Expression

GEO Profiles:Os06g0639500

Genome Context

<gbrowseImage1> name=NC_008399:26880185..26884063 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26880185..26884063 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagggcaaagatctgattcgcagtcagatgaatcgttcgaatacatgttgcttgagagggaccctgatctttaccgtacagtcttctcgggcccgagccagataagtccgtggattgacccgagcgtgctgactttgcagcaccggatagggagaggtccatttggggatgtttggattgcaacccaccatcagaggacagaggatcatgatcggtaccatgaggtcgctgtgaagatgttgcatccaattagagaggaccaactgcaagccttctcagtgaggtttgacgagatctttagcaaatgccaaggtctaagcaatgtgtgcttcctacatggcatctcaacacagaatggaaggatttgtatagcaatgaagttttacgaaggatccattggagataagatggcccggcttaaaggtggaaggatccctttatcagatgttttaagatatggtgctgatttggcccgtggcattatagacctgcactcaagaggaatattgattctaaatcttaagccctgtaattttctccttgatgaacatgaccatgctgtgctgggtgattttggaattccgtccttgctgtttgggctctcactgcctaatccagatcttatccaacgacttggaactccaaattacatggccccagaacaatggcaaccaagcattagagggccaattagctatgagacagactcatggggttttgcctggagcatccttgagatgttgagtggcattcaaccatggcgtggcaaatcaccagatgaggtttatcagttggttgtcctgaagaaagaaaaaccaatttttccatacaatttgcctccagcaatagagaatgtcctttctggatgctttgaatatgactttagagaccgcccccagatgactgatattttagatgcatttgagagtgcaaaagatgtagattacgaaaatactgaccagggaaattctgaaaatctaaggatggtcagtccagccctgccaagccgcactaactggtcattcttcaaggacaagttgcaagtgggagacaaggttcgctcgagaaagcttaaaaacacttgtagtccaacaaccatggaagtccctgatggaaccatagttggaatggaggataatggagagcgtgatggctacattcttgtaaggatccatggtttacatgatcctttgaaggttcgctcttcaacagtggaaagggtaacctatggtttcgctgctggagactgggtacggcttagggaggatgagaagaagcgatctcaggttggaattcttcatagcattgaccgtagtggtactgtttatgtaggtctgattggagtggacaccctctggaagggtgaatactctgaccttcaaatggctgaagcctactgtgttgggcagtttgtgcggctgaaagccaatatttcaagcccacagtttgaatggcagcgaaagagaggtggaggactggctacaggccgtatttcgcagatactaccaaatggatgccttttcataaaatttccaggcaaatttaaccttggtgaagtatgcagttgcttggcagatccctctgaggttgaggtggtgagctttgacaagtgtgaggggatcgtgaagaagtacgagcacctcgaggatttccattgggcggtcaggccgctgttcattgctgtaggtttcttcaccgctctgaagctaggcatctttgttgggaagggcattgctcggccaagaagtcgaaaggttgccagcgtctctgatcagagtgatcatcagcaactacagcagcaagaagtgcaaaacaatgccaatgcagcatggctccctccaactgtggcaaacatgctgtttagagacggtcctacgctttctggataa</cdnaseq>

Protein Sequence

<aaseq>MAGQRSDSQSDESFEYMLLERDPDLYRTVFSGPSQISPWIDPSV LTLQHRIGRGPFGDVWIATHHQRTEDHDRYHEVAVKMLHPIREDQLQAFSVRFDEIFS KCQGLSNVCFLHGISTQNGRICIAMKFYEGSIGDKMARLKGGRIPLSDVLRYGADLAR GIIDLHSRGILILNLKPCNFLLDEHDHAVLGDFGIPSLLFGLSLPNPDLIQRLGTPNY MAPEQWQPSIRGPISYETDSWGFAWSILEMLSGIQPWRGKSPDEVYQLVVLKKEKPIF PYNLPPAIENVLSGCFEYDFRDRPQMTDILDAFESAKDVDYENTDQGNSENLRMVSPA LPSRTNWSFFKDKLQVGDKVRSRKLKNTCSPTTMEVPDGTIVGMEDNGERDGYILVRI HGLHDPLKVRSSTVERVTYGFAAGDWVRLREDEKKRSQVGILHSIDRSGTVYVGLIGV DTLWKGEYSDLQMAEAYCVGQFVRLKANISSPQFEWQRKRGGGLATGRISQILPNGCL FIKFPGKFNLGEVCSCLADPSEVEVVSFDKCEGIVKKYEHLEDFHWAVRPLFIAVGFF TALKLGIFVGKGIARPRSRKVASVSDQSDHQQLQQQEVQNNANAAWLPPTVANMLFRD GPTLSG</aaseq>

Gene Sequence

<dnaseqindica>958..1323#1421..1512#1787..2260#2550..3510#acagttctactccacacctcctctctctctctctcgctcgctcgctctcctctcctccctcgcgcgcgcggccggcgagcggagcgggtcggcaggtgcgcggacggcgtcgtctcctcccccgactccgccgcagcctcccaccctccctgtgccgcctcctcgcgcgcgctgccgccgccggcgagcaggtttggagttggggggcgacgtggcaggcctgcttgctcctctaaccgaattgaaggtatccgtttctcctcccctttgctacttcatgagccgtcatagattggagatccatccgggcgaacaatggattttgtgcggtttcttccattccacacccaatttgttaacccgtacaggttactagatggcagtttgcttgaagagaggattggggaattaatcggctgaacaccgattccccggcgttatgtcctcctctgctctcgtgccccattgactttttgcgttattgtaatggccaaattggccgggttgagtgagccttactggttactgagctgttcttgcttgagcttggagtgaccacattccccggcaagcacggttaaatcctggtgcccgtgaatattacgcatatgcatgtggactttcaaaaggattttagtaagatcagggatgtgcggctggtgtccgtctcttagagcctatgttaagtggtgtatatgcgggggtgtgagtgtggtgtcacgtgagtagtggtgtgtgtgcgtgtgtctgccgtgtaattgcaaaaaagaaaagcttctagtactttaccccactaaaaaagttttggatttctgatgctactagtttcagccacagaaaattgggttgagtttcatttggtggagtgctgtgctccagaaacaagaaaatcttggtgagaacatagaaagttgaatgttgcctgagtgcttaatggcgaaattgtgttggcaggaaatggcagggcaaagatctgattcgcagtcagatgaatcgttcgaatacatgttgcttgagagggaccctgatctttaccgtacagtcttctcgggcccgagccagataagtccgtggattgacccgagcgtgctgactttgcagcaccggatagggagaggtccatttggggatgtttggattgcaacccaccatcagaggacagaggatcatgatcggtaccatgaggtcgctgtgaagatgttgcatccaattagagaggaccaactgcaagccttctcagtgaggtttgacgagatctttagcaaatgccaaggtctaagcaatgtgtgcttcctacatggcatctcaacacagaatggaagggtatgtatgctattagtggtgtgttgatctttcttgtcttgattatctttgcacatcaggccagcctaatagcttattttgtatcatggttttttagatttgtatagcaatgaagttttacgaaggatccattggagataagatggcccggcttaaaggtggaaggatccctttatcagatgttttaaggtacggtagaatttcccacagtttatcacatatactaatattgccatgatcaacgcattacaaattgaaccttaggatttcagcatgtagtttgcaacttcctattgatgttctgactgctgacttggttggttggattatttgtctgatttcctttctcattttagcattggcacaagttcttattgatttctgagagtgattatggtctatttagaggaatttcgtgcttattttcttcagaatgtttcttatatatctttttaattcacagatatggtgctgatttggcccgtggcattatagacctgcactcaagaggaatattgattctaaatcttaagccctgtaattttctccttgatgaacatgaccatgctgtgctgggtgattttggaattccgtccttgctgtttgggctctcactgcctaatccagatcttatccaacgacttggaactccaaattacatggccccagaacaatggcaaccaagcattagagggccaattagctatgagacagactcatggggttttgcctggagcatccttgagatgttgagtggcattcaaccatggcgtggcaaatcaccagatgaggtttatcagttggttgtcctgaagaaagaaaaaccaatttttccatacaatttgcctccagcaatagagaatgtcctttctggatgctttgaatatgactttagagaccgcccccagatgactgatattttagatgcatttgagaggtaacatgcttattatcctgcttttcatgttcaacaatttacattttgattgaattgccattgagttattttttttgcttatatactataatttacaaaagctaatcggtgctaaatatgtgaatccatggaattgtgtgttttaatacttgtattctgttagcttgttgtaatttgaagtatcttatatatttatatgcatttttttcctttgcataattctttactgtcccatagcagtaacttggattacatgttgtcctaattatttctttttaattttgattagtgcaaaagatgtagattacgaaaatactgaccagggaaattctgaaaatctaaggatggtcagtccagccctgccaagccgcactaactggtcattcttcaaggacaagttgcaagtgggagacaaggttcgctcgagaaagcttaaaaacacttgtagtccaacaaccatggaagtccctgatggaaccatagttggaatggaggataatggagagcgtgatggctacattcttgtaaggatccatggtttacatgatcctttgaaggttcgctcttcaacagtggaaagggtaacctatggtttcgctgctggagactgggtacggcttagggaggatgagaagaagcgatctcaggttggaattcttcatagcattgaccgtagtggtactgtttatgtaggtctgattggagtggacaccctctggaagggtgaatactctgaccttcaaatggctgaagcctactgtgttgggcagtttgtgcggctgaaagccaatatttcaagcccacagtttgaatggcagcgaaagagaggtggaggactggctacaggccgtatttcgcagatactaccaaatggatgccttttcataaaatttccaggcaaatttaaccttggtgaagtatgcagttgcttggcagatccctctgaggttgaggtggtgagctttgacaagtgtgaggggatcgtgaagaagtacgagcacctcgaggatttccattgggcggtcaggccgctgttcattgctgtaggtttcttcaccgctctgaagctaggcatctttgttgggaagggcattgctcggccaagaagtcgaaaggttgccagcgtctctgatcagagtgatcatcagcaactacagcagcaagaagtgcaaaacaatgccaatgcagcatggctccctccaactgtggcaaacatgctgtttagagacggtcctacgctttctggataaaatgaaaatcaaaaccagtgcaagatggagagtttcagaactactggataatgcaacgcccaagcaaatcgtagttcatacttagacctgaaacttgtcttgccacaagacctgtaaatatttccaccttcactctactatcatctccatgttcacaaaaacatgttctgtgcttatgtctgtaaattgtaggcttgcagtccaaatcctgatactgtcttttgcttttgtcattacactgcaatctctcagtatccctggattttctgttcccgatccatcaatttgcagttgcatctgcaacgtgatgaacggcatgcgaatatggatgaaaattgccataaacgctggcaacacaatcaacatagg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0639500, RefSeq:Os06g0639500