Os06g0639600

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Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0639600| Description = Similar to Elongator component| Version = NM_001064696.1 GI:115469123 GeneID:4341622| Length = 3356 bp| Definition ...")
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Gene Name

Os06g0639600

Description

Similar to Elongator component

Version

NM_001064696.1 GI:115469123 GeneID:4341622

Length

3356 bp

Definition

Oryza sativa Japonica Group Os06g0639600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26884061..26887416

Sequence Coding Region

26884479..26884646,26884759..26884850,26884942..26885099,26885243..26885323,26885500..26885656
,26886135..26886210,26886300..26886550,26887042..26887192

Expression

GEO Profiles:Os06g0639600

Genome Context

<gbrowseImage1> name=NC_008399:26884061..26887416 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26884061..26887416 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgccggaggccagaccgtcggccggagcagcttctctcgagcagcggcacctcatgtggcgtcctcatccaccgccgcaggagtcaagcttggtcctaatggcgccgccttcgtctcctcgggcatccccgacctcgacaggattctaggtgggggttttcttattggatcagttgtaatgatcatggaggactctgatgcgcctcaccacctcctactgcttcggagcttcatggcgcagggtgttgtgcacaaacaaccgctgctcttcgcaggacctatgaaggaaccccgcttgttccttggtacattacctgctgttgcatcttcaaaggaggatggacgacaaagagggatgggggctggaacaagtagcgatggccgaacaagtgacgaggctttgaggatagcttggcagtacaagaaatactttggagaagagaagacttctcatgctgaacacagagacaacaagcaagaatttagcaatgattttgatttacggaagcccttggaaaggcatttacttaatgctcagaatattgaatgtgctagcactcaagaaggagacactcttggtgtcctccaggaccgttgttccacattcttgtccaaacttccgagaaaagatggtggaaatgcgcatgctggacggattgctatacaatcactatgtgcaccacaatgcggatactttgagaaggactgggacatggtctcatttatcagatcgctgaaggccatggttcgtgcatctaatgcagttgctgttataacatttccaaatacagttttatcaagctccttttgtaagagatggcagcacctggcggacacacttctgtcaatcaaagcaattccagatgaggacaaagagttagcaaaactcctcactggatatcaggatatggttggttttttacatgtgcataaggtggcacagactaatagccaggtccccgtcatattggaggcgtccacgttttctctgaagttgcgcaagaggaggtcgctggtgttagaacggttgaatcaagctccagtggatggatcaggtggtccttcacttgatgcatctggcagttgctcctcatcctcacaaggttcacagcttgatttctag</cdnaseq>

Protein Sequence

<aaseq>MAAAAGGQTVGRSSFSRAAAPHVASSSTAAGVKLGPNGAAFVSS GIPDLDRILGGGFLIGSVVMIMEDSDAPHHLLLLRSFMAQGVVHKQPLLFAGPMKEPR LFLGTLPAVASSKEDGRQRGMGAGTSSDGRTSDEALRIAWQYKKYFGEEKTSHAEHRD NKQEFSNDFDLRKPLERHLLNAQNIECASTQEGDTLGVLQDRCSTFLSKLPRKDGGNA HAGRIAIQSLCAPQCGYFEKDWDMVSFIRSLKAMVRASNAVAVITFPNTVLSSSFCKR WQHLADTLLSIKAIPDEDKELAKLLTGYQDMVGFLHVHKVAQTNSQVPVILEASTFSL KLRKRRSLVLERLNQAPVDGSGGPSLDASGSCSSSSQGSQLDF</aaseq>

Gene Sequence

<dnaseqindica>2771..2938#2567..2658#2318..2475#2094..2174#1761..1917#1207..1282#867..1117#225..375#aagaaatagcccaagcaaatagcccatgtggtcttcgtagtgaggcaccgccgtcgcctcgccctcgacccctcccgccgccgtgggtttccgcctcgttctcgagcgctctcgccgccgccgcggcgtcctcgctgcggtcttctcccttccttctcctagtctaagccgccgctgtgaagtggagctcgatctgtgccccgtgaaacttcgccgccaactccatggccgccgccgccggaggccagaccgtcggccggagcagcttctctcgagcagcggcacctcatgtggcgtcctcatccaccgccgcaggagtcaagcttggtcctaatggcgccgccttcgtctcctcgggcatccccgacctcgacagtaagcagattcttgcttgcagaccctttttattgttttgctgaattaaaatctagcgttttttttctgttctactaacgcgattattcctatttatgtaagaaattccttttatctttaggtcacttcacatgcttggttgttacctaggagattagggaaagggtgctaattggagtattatttcatagtacaatatatgctactactaactatgtttgcaaatgcaatgtgcgtagttttgttaggaatcaaataaaattgcttcgatgatatatcttgatcacctgcattacttgttattttaggagtacaaattcctttcaatattttgtgtttagccatgtatagatgccgtgaggaaagtttggttcttgcggtgagtttaatggggtaaaacctttaaactggaaaaaaaaaagctgatgctcttatgagttatggtgatgtgcaattcagttcaccataatttactagtttaacggatgcagggattctaggtgggggttttcttattggatcagttgtaatgatcatggaggactctgatgcgcctcaccacctcctactgcttcggagcttcatggcgcagggtgttgtgcacaaacaaccgctgctcttcgcaggacctatgaaggaaccccgcttgttccttggtacattacctgctgttgcatcttcaaaggaggatggacgacaaagagggatgggggctggaacaagtagcgatggccgaacaagtgtatgtctcgaggaagaatatttggcagtcaacttgagccctgaaaagtgttattattttaatgttgatctcgacatgtaattgtgtaggacgaggctttgaggatagcttggcagtacaagaaatactttggagaagagaagacttctcatgctgaacacagaggtgatactattatttcctttgtattcttgttggccatgaatacgcaaaaaagcatgcttgtaaacatttttgaggatacgcaagaaaacaaaataaataatattgttcgtgaatggattttgtctgagcccttagcttctataatctacttattcctaagcaccattgttgtcactgacacctgagctgggcattaggatacatttaaggcgtggatgatgatgataagagattcccaccatatcataagattcgcgttctttcttgaaaatcgacatttctccaaatccagaagaaagatgggattctaggattatccttttgggcaaagacctaaatgcataatattagcatacttcaggataatagcaatgttcataatacctatcagtttgctttaaaagtgttttttattagctatcatcactgtctatcaagatgtttgtcaaagttctgactcagtttagtataattgcagacaacaagcaagaatttagcaatgattttgatttacggaagcccttggaaaggcatttacttaatgctcagaatattgaatgtgctagcactcaagaaggagacactcttggtgtcctccaggaccgttgttccacattcttgtccaaacttccgaggtaagggttcttgtctctatgctcagacggtttttctgaaggaaaatcattctaacattgcaatgccatgttaccataaattcgtctaccataatattttttttattaacataaaatttgatggcatgtaccatattcgttattactcgtgaatttattttgttattggtgttcagaaaagatggtggaaatgcgcatgctggacggattgctatacaatcactatgtgcaccacaatgcggatactttgagaaggaaagtatttaatgcgactgatgtctattagtcttgattggttgctgcgatgcattgaatcttttttcagaccaatttatatattttcacctttctaatatcatcgttatgtacttgcaactaattatatttgtgtattgcaggactgggacatggtctcatttatcagatcgctgaaggccatggttcgtgcatctaatgcagttgctgttataacatttccaaatacagttttatcaagctccttttgtaagagatggcagcacctggcggacacacttctgtcaatcaaagcaattccaggtaagcaagcatggccctttaaagtatgtcatgtgattgctattttgatcaactatatcctttattaagtttccattttatttgtcaccagatgaggacaaagagttagcaaaactcctcactggatatcaggatatggttggttttttacatgtgcataaggtggcacagactaatagccaggtatcaaagctttcatgattgttttttttttccacgaattaagctttcataatagttgtataaacaaaactttgcactctctcgtttcgatgcctttcttatcaacaagcaggtccccgtcatattggaggcgtccacgttttctctgaagttgcgcaagaggaggtcgctggtgttagaacggttgaatcaagctccagtggatggatcaggtggtccttcacttgatgcatctggcagttgctcctcatcctcacaaggttcacagcttgatttctagttcagatgctgaacctggtctccgagaagatgggaaggccttcacacgagcttcacagtatcacttgatgactagtagctttcatgtttcagctgagaggatgctcagaaaaagtattgacacagaaggttctggtgttgtgtaattgttgctctctggaaaaatgtagtttgtagaggtttagttctttacaaattaggcaatttggtggatagtatcagccagtccaatcccatgtatggttcagttgtggacttctgctatacaaactcttttgttaatcaggttgaaattgtactacctctgtccaaaaagacttcatttctagcaacgaatctggacaagtactaggaatgaagtcctttcggaaagaaggtatattatatgcagaattgcagatgatgccatataatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0639600, RefSeq:Os06g0639600