Os01g0546900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0546900 |
|---|---|
| Description |
Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein |
| Version |
NM_001049820.1 GI:115437393 GeneID:4326179 |
| Length |
3677 bp |
| Definition |
Oryza sativa Japonica Group Os01g0546900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:21979543..21983219 |
| Sequence Coding Region |
21979568..21979666,21980184..21980346,21980505..21980622,21981342..21981411,21981509..21981589 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:21979543..21983219 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:21979543..21983219 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgatgcgggagtttgtcgaccactgggctgcgagttcgagcaatggggattctgatggttccctgctgtacctgaaagattggcattttgtgaaggagtaccctggttatgttgcatacaccacaccaacattctttgccgatgattggctcaacatgtatcttgatagtcatcctatacatcgagattctgacattgccaaccatacaaatgaaataaactgtgctgactatcggtttgtttacatgggaccaaaaggaacttggactcctcttcatgctgatgtttttaggtcatacagctggtcggcaaatgtatgcggcagaaaactatggctctttctaccaccatcacaaagtcattttgtatttgataggaacctacgatcttcggtctataacataaatgatgatgtttctgaaaagcagtttcctgaattcaataatactaaatggctagagtgcactcaggagcagaatgaaatcatttttgtgcctagtgggtggtatcaccaagtccataacctggaggatactatatcaataaaccataattggtttaatggctacaaccttcattgggtgtggaacttgcttcatgaagattacaaggtagcaaaagattatattgaagacattcgggacatatgtgacgattttgagggactatgtcaacgcaacttagcagcaaatacaggcatgaacttctatgacttcttcgtcttcataacacgttttgctttagccaatatagttgagctttaccatattcagaatccaaaagatactgacttcatttcagccgaaactgctaaccactttgtctataatctcatgtcgatccgtgatgttgcatcaaaaatggtatctacagaagctttcaataccgagaatatttgtaatatctcagaacaaaaccggagtgctttctctgatatcataaaaatattggaagaagagagtttcagaaggttattggtggcgttgtcaaaggcatataattacatagacagaggacaaaaagattgtctcaaaatgaaggattcaagtcagaagggttgtttgtcagtaacctgcttaaaacctgactgtaatgttgttggtgacattatttctttcatgcgtgagattcatggacctatggatttggtaacactaattgatagtgctctctctgatagatag</cdnaseq> |
| Protein Sequence |
<aaseq>MSMREFVDHWAASSSNGDSDGSLLYLKDWHFVKEYPGYVAYTTP TFFADDWLNMYLDSHPIHRDSDIANHTNEINCADYRFVYMGPKGTWTPLHADVFRSYS WSANVCGRKLWLFLPPSQSHFVFDRNLRSSVYNINDDVSEKQFPEFNNTKWLECTQEQ NEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLHWVWNLLHEDYKVAKDYIEDIRDIC DDFEGLCQRNLAANTGMNFYDFFVFITRFALANIVELYHIQNPKDTDFISAETANHFV YNLMSIRDVASKMVSTEAFNTENICNISEQNRSAFSDIIKILEEESFRRLLVALSKAY NYIDRGQKDCLKMKDSSQKGCLSVTCLKPDCNVVGDIISFMREIHGPMDLVTLIDSAL SDR</aaseq> |
| Gene Sequence |
<dnaseqindica>26..124#642..804#963..1080#1800..1869#1967..2047#2779..2835#2909..3020#3098..3585#gttctcggaccagaagcggctcgagatgtcgatgcgggagtttgtcgaccactgggctgcgagttcgagcaatggggattctgatggttccctgctgtacctgaaagattggcattttgtgaaggtctgactagattccgcagcatgtgttatgttggcttttgtttgctgaatttgtggtatcctaacattatctaggtttcttcttgcgatcatattaagtggcagtgtcagaaactgcaatcgtatttgctattagtttgggccgggcagacgtgagatttagtcatgtataacataattgttgctgtatatctgtttgttttatttgtatgccacaaaattttctttagcaactgaaattattaggaccaatacagtacagttttaaagcacatgatattacatagtttcaacactgaagtctattccaattttgtagccttttaggctatagtctatagagtaatatcagtatgagttaattccacatgtggtatatgcctgtgcttataagattgaactcttcctttgatagctccaacaatggagtgtactgaatgcaatattttattctattcccaattgataattcatcccctgctcaatgtggttgattttgtattgtcttgaccttccaggagtaccctggttatgttgcatacaccacaccaacattctttgccgatgattggctcaacatgtatcttgatagtcatcctatacatcgagattctgacattgccaaccatacaaatgaaataaactgtgctgactatcggtttgtttacatgggaccaaaaggtaagctctgttttaagattctacttatgtgttgttctgagctttacatgtatgacattgaggtgttctttcttccgtggctatgaacatgatcacacattagatgttacacttcaatttactatctttcttgtattgtgatttcatcttctacgtaggaacttggactcctcttcatgctgatgtttttaggtcatacagctggtcggcaaatgtatgcggcagaaaactatggctctttctaccaccatcacaaagtcattttgtatttgataggtaattattgagttggatgcttcttagagttgtgtttcactgttagatgaattttgtcaattagacagctgtcactaataagaaaatttggaaattggtgatacttcttagcagcaattgtttcctgttttctttgatgtaacataattcaagaatggcaactcatgttttagataagacattaaattgatcttttaggaaatacatatatggcattatctggctctttgcaactataagagtgaattataagttagttttcttttcatgcaactagtatgcttgattcttatggatgtaaagcaaatttaaacaaaggataaagataagtctgtttatttcataactggtgtgagctatttctattcacttagaagtgataacttccttctgaagtttaacaacctcagcttggtagttctgaatggtggataagtcttaaagagtatgacctggattttgccaaagaacttgcatagtttaccttaatttgcaggcttatcacatttgtaacgtaccctgtctttgttgcaatgtatagtttctgcaatctattaatagcatccatatgtaactaattttcatttggcaatttatcatggagtgtgatcttgatttaattcttttgctctgtgctgcctgttgtttttccatgctcacttgatgaaatagtactgtctattgttacctaattggtgattgttgattatgccatgtaggaacctacgatcttcggtctataacataaatgatgatgtttctgaaaagcagtttcctgaattcaataatgtattttctctcagcaatacttattttgaaaagttcattttgtagctcccccccccctcctccctgtggtttaatattttaaatgttccttttgtagactaaatggctagagtgcactcaggagcagaatgaaatcatttttgtgcctagtgggtggtatcaccaagtccataacctggtaaatgccttcatcttcagttcttcaccacatgttgatgcatttgatataatttcaatgttggattagatctgggctgcaaatgatagccgccctaaaaacagagtgagaagtagcaaacctgaccattgaatcagatttgttttattaagattaaatataactgctgaactgtctgaaagatcccccataattactataaattcactctcacacccttccaatcttccacttcacaataacataagcaatctgtcttgatctaaacaattagattttgactgaaaacttgaaggtgagttctcattatcctatttcgaggatggtctgtactagatgtatccagcaggaatggatgtgggtttgccttcttgttattgaatgaccacagttcaacttcaactattattgaactgaaatatattttatggttgaaactgtgtgcatctttaaagtgggattgctcagcctataccaatttatggtgattgaatcatgtgggtctgatccctatgactgcaattggtgaccaaccagagcaactttttgctcccaaacaaatttctgatgtcactgtaactcaacttgaactgcctttgaaatggcagtgaggcactcattcatgccactctactctttgcatctttgccgttggactttctattaaggaccccagacacccgcaactgtcaggaacttatgagtttgttcccttttgccatttattacaggaggatactatatcaataaaccataattggtttaatggctacaaccttcattgggtggtgagcacgtaattgtacaaacttcatttcaatagctatagcatttttttttctaacattgtacacactatagtggaacttgcttcatgaagattacaaggtagcaaaagattatattgaagacattcgggacatatgtgacgattttgagggactatgtcaacgcaacttagcagcaaatacaggtaatgttctaatcatatgaagaaacataacaaatgacatactttctgataacatcatgttgggtttctcatttcaggcatgaacttctatgacttcttcgtcttcataacacgttttgctttagccaatatagttgagctttaccatattcagaatccaaaagatactgacttcatttcagccgaaactgctaaccactttgtctataatctcatgtcgatccgtgatgttgcatcaaaaatggtatctacagaagctttcaataccgagaatatttgtaatatctcagaacaaaaccggagtgctttctctgatatcataaaaatattggaagaagagagtttcagaaggttattggtggcgttgtcaaaggcatataattacatagacagaggacaaaaagattgtctcaaaatgaaggattcaagtcagaagggttgtttgtcagtaacctgcttaaaacctgactgtaatgttgttggtgacattatttctttcatgcgtgagattcatggacctatggatttggtaacactaattgatagtgctctctctgatagatagttataagcttacctggcactgtaaacttatgtttgcaccgttgcataacctatttctttaggaaccctggatacttgaccactgttaaatgc</dnaseqindica> |
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