Os06g0643700

From RiceWiki
Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0643700| Description = Hly-III related proteins family protein| Version = NM_001064715.2 GI:297606255 GeneID:4341641| Length = 3127 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0643700

Description

Hly-III related proteins family protein

Version

NM_001064715.2 GI:297606255 GeneID:4341641

Length

3127 bp

Definition

Oryza sativa Japonica Group Os06g0643700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27111982..27115108

Sequence Coding Region

27112328..27113023,27114186..27114240,27114628..27114723,27114825..27115108

Expression

GEO Profiles:Os06g0643700

Genome Context

<gbrowseImage1> name=NC_008399:27111982..27115108 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27111982..27115108 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagaggaggcagccatggccaccatggagagcgcctaccatgatgagcttgctccggcggcggcgccggcgccggcgaagggaggagggagcaagaagaagaggaagcagcagaagagggaggagaagaggaaggagtgcaggctggtgagctaccacgagctgccggactacatgaaggagaacgagttcatcctcgactactaccgctccgagtggcccatcctcaatgccctcctcagcctcttctcctggcacaacgagaccatcaacatctggacgcatcttcttgggttcgtgctgttcttcggcctcaccgtcctgcatcttggccagtacttcccccaggttgctgatctcatcggacacctctcctggccaatctcaaaggttgctgaaaatgtctccagtaacattggagatgtcctctctggcgcggcgtcgttcatgcaggcgagcccggcgtcgagcgccggcgccatggcggcggcgtggccggtgacggcggcggcggcggcgacgacgcggtggccgttcttcgtgttcctcgcgggcgccatgttctgcctgctgagcagcgcggcgtgccacctcctgtcgtgccactcgcaccgcctcaacctgttcctcatccgcctcgactacaccggcatcgccgtcatgatcgtcgtctccttcttcccgcccatctactacatcttccagtgcgagccgcggtggcaggtggtgtacctgtcggcgatcaccgccgccggggtggccaccgtgtacgcgctcatgtcgcccaggctgagcgcggcgaggtaccgcgcccaccgcgcgctgctgttcgtcgccatgggcctctccggcgtcgtccccgccgcccacgccgtcgccgtcaactggcacgagccccgccggaacgtgacgctggcgtacgagggcgccatggcggcgtcctacctcgccggcaccgcgttctacctcacccgcgtcccggagcggtggcgccccggcatgttcgacctgtgcggccacagccaccagatcttccacgcgctcgtcatcgccggcgcgctcgcgcactacgccgccgccatcgtcttcatccaggcacgcgacgagatgggctgcccggcgccatag</cdnaseq>

Protein Sequence

<aaseq>MGEEAAMATMESAYHDELAPAAAPAPAKGGGSKKKRKQQKREEK RKECRLVSYHELPDYMKENEFILDYYRSEWPILNALLSLFSWHNETINIWTHLLGFVL FFGLTVLHLGQYFPQVADLIGHLSWPISKVAENVSSNIGDVLSGAASFMQASPASSAG AMAAAWPVTAAAAATTRWPFFVFLAGAMFCLLSSAACHLLSCHSHRLNLFLIRLDYTG IAVMIVVSFFPPIYYIFQCEPRWQVVYLSAITAAGVATVYALMSPRLSAARYRAHRAL LFVAMGLSGVVPAAHAVAVNWHEPRRNVTLAYEGAMAASYLAGTAFYLTRVPERWRPG MFDLCGHSHQIFHALVIAGALAHYAAAIVFIQARDEMGCPAP</aaseq>

Gene Sequence

<dnaseqindica>2086..2781#869..923#386..481#1..284#atgggagaggaggcagccatggccaccatggagagcgcctaccatgatgagcttgctccggcggcggcgccggcgccggcgaagggaggagggagcaagaagaagaggaagcagcagaagagggaggagaagaggaaggagtgcaggctggtgagctaccacgagctgccggactacatgaaggagaacgagttcatcctcgactactaccgctccgagtggcccatcctcaatgccctcctcagcctcttctcctggcacaacgagaccatcaacatctggacgtatggatttcaacctgaatttttctgaatttgattctggttcagctttgtgtgctgtgttcttgctgctcatcgtgtgggcgttcttggtgtttgttcaggcatcttcttgggttcgtgctgttcttcggcctcaccgtcctgcatcttggccagtacttcccccaggttgctgatctcatcggacacctctcctggtgagtttgtgaaagcctcagtggaatttgtttggttaaaatcttggctaatgtgtcctggaattagtagcacgaaatagtttagtttttcagtagctgtgagatgaatattttaacgttttaaggcactgaataggattctacatcctacttgtttcttgttaatcaaattatgctgagtgatagcatgagagtttcgataaatctagctgcttgtgtatcgacaaattaaatctcaccaacaaattcactccaattccatacaacctggaaaatgacaagttgcagtttttatttcagatgtctatgtgctttgcatgcttaatattctgttcactgtctgtccctttttttttttctgagaattgtacttctatttgactgcaggccaatctcaaaggttgctgaaaatgtctccagtaacattggagatgtcctctctgtgagtaaagcttctatttcctgaaatcattcattcctgtgatagaagtagaagttactgataagaaaaaaaaatactggattgcagtaatattattgggctggttagatccacatgcttaggagattcattgtgcagctttgagtggctccacttttcagtactgtcctgtttccttctgtttgttcagatgtgcatgatttggactttttggatggcagctgggccaaagtgttgggtggggcttctgattgctttcacctttacctgatgaaccttgcccaattaggtccccttttactggtgcccattcatgacaaatcctagattaagtgttggccacttcacttcaccacaagatgttaagctttggtgatgtgttcataggacttggttgtgacttggtgattgtgatgatcaagtctacccgctacgacacgactccagtgtcgccgcgggttatcttttcttcttgaaatccttgtgccttggatgtctagattgacaagatacatcatgcaaccaccaaagggaagattttgagacttgaggggaagattttgggaggttaagaggttaggggtcactaaaattggcaaacattggggacacatatacaaggcgatatttgcatgaacgtggtagcagtttatcgcgtgtgatccttccctttgtgttttcataccaaaccttcttccatcctcacatggtaacagttgtcctctctttttgtgattgagactagttggtagacaattttgggcaaccatagtaaaccttcatttttttgcataattaattacttgctagctaaattcattgcttgtcatggcttcccaactgttcttgaccaaagaacagtgtttggtaaccaaatagaaattcttagataaggaagatgaatttgttcggagttcggacaccaatatggttagatgttctattcaagcgttgaaacgaatgtcgtcgcaataattcggtgttcccagtcttctaaattctaatgcatatgctttaatttggagagtatattgctttcagatgtttaatgacatattatacttcgatgtgatatgctacaatgatgatcggtgtccgatcagctgtcctgtcacgtcaatggtttgatcgagtttggcgtgtgtgtccatgcattggccagggcgcggcgtcgttcatgcaggcgagcccggcgtcgagcgccggcgccatggcggcggcgtggccggtgacggcggcggcggcggcgacgacgcggtggccgttcttcgtgttcctcgcgggcgccatgttctgcctgctgagcagcgcggcgtgccacctcctgtcgtgccactcgcaccgcctcaacctgttcctcatccgcctcgactacaccggcatcgccgtcatgatcgtcgtctccttcttcccgcccatctactacatcttccagtgcgagccgcggtggcaggtggtgtacctgtcggcgatcaccgccgccggggtggccaccgtgtacgcgctcatgtcgcccaggctgagcgcggcgaggtaccgcgcccaccgcgcgctgctgttcgtcgccatgggcctctccggcgtcgtccccgccgcccacgccgtcgccgtcaactggcacgagccccgccggaacgtgacgctggcgtacgagggcgccatggcggcgtcctacctcgccggcaccgcgttctacctcacccgcgtcccggagcggtggcgccccggcatgttcgacctgtgcggccacagccaccagatcttccacgcgctcgtcatcgccggcgcgctcgcgcactacgccgccgccatcgtcttcatccaggcacgcgacgagatgggctgcccggcgccatagctaagctagcgatcgaacacacaagaaaacatttctctccatggatcgatgaaccaaatgataattcgatacagcagagtacacaagaagcatatatatacagcggtagacgatcgaattaattgatttgagtggttttgtttttgtgaggtttttttttaaaatttttaagtttgtttagcttgcaggagtcggtcatcaagtgtgagatattaccgtgtcgtccggttaatgacaaggatttattgattgttatgatgtcgaaacttgtacatacaagaagcaactgttgcttattcgttcgttgtaagatgcaacaaattaagaagagagagagagataaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0643700, RefSeq:Os06g0643700