Os06g0643900

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Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0643900| Description = Similar to Acid phosphatase precursor| Version = NM_001064717.1 GI:115469165 GeneID:4341643| Length = 5023 bp| Defi...")
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Gene Name

Os06g0643900

Description

Similar to Acid phosphatase precursor

Version

NM_001064717.1 GI:115469165 GeneID:4341643

Length

5023 bp

Definition

Oryza sativa Japonica Group Os06g0643900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27131220..27136242

Sequence Coding Region

27131507..27131588,27131830..27131991,27132092..27132213,27132417..27132637,27133192..27133330
,27133945..27134168,27134485..27134596,27135066..27135266,27135341..27135508

Expression

GEO Profiles:Os06g0643900

Genome Context

<gbrowseImage1> name=NC_008399:27131220..27136242 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27131220..27136242 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctggagatttgcgttgttactgttacatgttcttctgtgccttgtcaatggcgtctcctgtggccgcacgagctcttacgtgcgtacggagtacccatcgactgatatacctctagaaagcgaatggtttgcggttccaaacggctacaatgcgccacagcaggttcatatcactcaaggtgactataatggaaaagctgttatagtatcatgggttactgtagcagaacctgggacaagtgaggtgctctatggtaaaaatgagcaccagtatgatcagagagtggaaggaacagtaacaaattataccttttacgactataaatctggatatattcaccattgccttgttgatggtcttgagtataacaccaaatattattataagattggaagtggagattcagctcgagaattttggtttgaaactcctccagcaattgatccagatgcatcatacacatttggcataattggtgatctggggcagacatttaattccctctcaacccttcaacattatgagaaaagcgaaggtcaaactgttttatttgttggggatttgtcatatgctgatagatatcaacataatgatggtgttcgttgggattcttgggggcggcttgtggaacgtagtaccgcttatcaaccatggatttggagcgctggtaaccatgaaattgaatacaggcctgatctgggagaaacttctacatttaagccatatctgcatagatgtcacactccatatttggcatcaaagagcagttctcctatgtggtatgcagtcagacgtgcatctgctcatatcattgtgctttctagctattctccattcgtaaaatacactcctcaatggacctggttgaagtatgaattgaagcatgtggatagagagaagactccttggcttattgttctcatgcattctcccatgtacaacagcaatgaagcacattacatggagggtgagagtatgagggctgcttttgagaaatggtttgtgaagtacaaggttgacttggtatttgcagggcatgtgcatgcttatgagagatcgtatcgtatctctaacatcaactacaacataacatcgggtaatcgatatccagtgccagacaaatctgctcctgtgtacataacagttggtgatggaggcaaccaggaagggcttgcttcaaggttcagtgatccacagccagactactctgcattcagggaggctagttatggtcattcgatcttgcaactgaaaaacaggactcatgctatctaccagtggaatagaaacgatgatgggaagcatgtacctgcggacaatgtggtgtttcacaaccagtattgggcaagcaacactcgccgcaggaggctgaagaagaagcattttcacttggatcaaattgaggacttgatatccgtgttctag</cdnaseq>

Protein Sequence

<aaseq>MGWRFALLLLHVLLCLVNGVSCGRTSSYVRTEYPSTDIPLESEW FAVPNGYNAPQQVHITQGDYNGKAVIVSWVTVAEPGTSEVLYGKNEHQYDQRVEGTVT NYTFYDYKSGYIHHCLVDGLEYNTKYYYKIGSGDSAREFWFETPPAIDPDASYTFGII GDLGQTFNSLSTLQHYEKSEGQTVLFVGDLSYADRYQHNDGVRWDSWGRLVERSTAYQ PWIWSAGNHEIEYRPDLGETSTFKPYLHRCHTPYLASKSSSPMWYAVRRASAHIIVLS SYSPFVKYTPQWTWLKYELKHVDREKTPWLIVLMHSPMYNSNEAHYMEGESMRAAFEK WFVKYKVDLVFAGHVHAYERSYRISNINYNITSGNRYPVPDKSAPVYITVGDGGNQEG LASRFSDPQPDYSAFREASYGHSILQLKNRTHAIYQWNRNDDGKHVPADNVVFHNQYW ASNTRRRRLKKKHFHLDQIEDLISVF</aaseq>

Gene Sequence

<dnaseqindica>4655..4736#4252..4413#4030..4151#3606..3826#2913..3051#2075..2298#1647..1758#977..1177#735..902#aacccagcgcgagacgatcccctcccctgcacggtaagcgaatcctcccaccctttttccagcttcgcttcgaatcatcctcctcctcgtctcgacttcgaatcagtagatcctctgcgatcctacgctttctcctccattttctcgccaccaccgtagtagacgagccgtgcggtatacttgtactacagagtttgcttccgtgaggtgtcagctttgctacgccgccttcactcctcgcctccgctggtgggtggtgggcttctctcccgctcgccatcctctccgtcgtcttcgccggcgaggcggcgcggcggcgcggcccccattccaccggcgcgtccgtctcgggaggttcgaatcaggtattcgtttcttcctcctccgcgcttcgcttggtgagcgggcgcgaggcgtggattgaagatccatccgaacttggggtgtgcttggattgggtgccctctggtagtacagcgccatagctgttcgtgtttattctgtacgaatctctgctggttgtaccagggaggtccaggacgacacaccatagccatgtggctgattcatgtgcacaatttttttatttttttaaaaaaacgtttaatccctcatttcgagtattttctgtggtcatactcgtatgaatctcaatatctcataggtgtttgttttggtctcaattgaacatgtaacaggttcaaaacggggatcggtagtgttctgcatcagtgatgggctggagatttgcgttgttactgttacatgttcttctgtgccttgtcaatggcgtctcctgtggccgcacgagctcttacgtgcgtacggagtacccatcgactgatatacctctagaaagcgaatggtttgcggttccaaacggctacaatgcgccacagcaggtatctaaactcttctgccagatcagttcattgcaatgaatcgacggtgttttaattgattggtctgctgccaggttcatatcactcaaggtgactataatggaaaagctgttatagtatcatgggttactgtagcagaacctgggacaagtgaggtgctctatggtaaaaatgagcaccagtatgatcagagagtggaaggaacagtaacaaattataccttttacgactataaatctggatatattcaccattgccttgttgatggtcttgaggtactagacttcattttcttcatatcgtttaggctttgcattttatacttgcatacaattgtagaaatatttgtccaacattatgtttacccatgcaaaatactaaaatagaataacctacaacatcatgtttcctttgtaaacagcttagacatattctaagtaactatcacacaaccttctcacttataattccataatgatctactttagctgtaaacttagagttattatgcacaaatttgatttgacagagaacttttcttcgtcaaatttcaattgagtaaggttatcatgttgaaacacgatgctcacctgcacaaattattttcacacactttcttagttctgtggaatagttctactattctagtatgatgcattaacaaaatactctgtgtgcacattattttgttgttagttccaatttaaaattgtaaatatataaaattactatattgttttgcagtataacaccaaatattattataagattggaagtggagattcagctcgagaattttggtttgaaactcctccagcaattgatccagatgcatcatacacatttggcataattggttcgtcttttgttttctcaagtatttttttgttaacagcatgtgtcatcgaattactttggatctctgcaacatctcttctaggattttacctaggttgcatgagtcatataagatagatctcaacaagattatactatcagaaggactggaaacacatcctctgttcttgtcaaacatcctagctttaggataagggaatacatgaacggaaaaaatggggatcaatgacttcatggaaagaaccactatgtcaagatatggttatagtgtccgagcttgttgatactaaagtcttctggctgtgctttgctaggtgatctggggcagacatttaattccctctcaacccttcaacattatgagaaaagcgaaggtcaaactgttttatttgttggggatttgtcatatgctgatagatatcaacataatgatggtgttcgttgggattcttgggggcggcttgtggaacgtagtaccgcttatcaaccatggatttggagcgctggtaaccatgaaattgaatacaggcctgatctggtatgttaacattcttctcatctatacaccagttgtttttttttaccacatattcctctgattggaagtagtgatttctcgacattttgtaaactcccaacttttttggatttttccttgctttagcatgttcagaagaggacaattacaggcaaataatactgaagaaaatagatatgtgatctatagatctttgtattagtttattttttcttatagctggctgtacgtggatttacacactgacaaggatctgtgcttataagctactccgtccgtctcattttaagtgcagccatggttttccgcgccaactttgatcgtccgtcttatttgaaaattttttgaaaaaattaaaaaccataagtcacaagtaaaatattattcatgttttatcatctcataacaacaaaaatactaattataaaaaaaattcaaataaggcggacgatcaaagttggacgaggaaactcatgattgcacttaaaatgggactgagggagtaataacttatccattgttcagaataacactgcagttccacctgagcattttaactagctgacatagttgtctttctttaaccctgaccgcattcgtatttatgttttcagggagaaacttctacatttaagccatatctgcatagatgtcacactccatatttggcatcaaagagcagttctcctatgtggtatgcagtcagacgtgcatctgctcatatcattgtgctttctagctattctccattcggtaagataaagatcctttctctgacttgctttgttttgtatatgccattaagtctgtacaaaccaccagatttagtggtggcggctgtggtggtgatagtgacttgggagttccaagtgcttcacgtagttcaaaattccaagtcaaggaggggcaaaagtagcacttcttagacaaaagaaattatcgtgttactgtcttcttgtcttcttactgatccaaatgtgagtatgacgatattctttatctctgatgcggatggatagaaacataaagtcttctctggtttgattgaaagtttgaaactactaataatgcaaggttccgcgttccagctgtttgaaacctgtaacattgtgtggggacaggcatggatgctcccttgaatgagtgcagatctactagtatctttttttcattggcgtaatatcctgaccatcatctactatatttagaagtgattatgtgatgcatgtatgatttgatagttggatgattcttttcattgaatattttgttgtatgccttataagcttatctctgatgtttaccagtaaaatacactcctcaatggacctggttgaagtatgaattgaagcatgtggatagagagaagactccttggcttattgttctcatgcattctcccatgtacaacagcaatgaagcacattacatggagggtgagagtatgagggctgcttttgagaaatggtttgtgaagtacaaggttgacttggtatttgcagggcatgtgcatgcttatgagagatcggtaaatatttacttaattctttggcacaagcttctttgatattaaaaaaaaagagctgaatttggtctgaatctcgtaaagttatattttgagaattgaccagaagaaattatgctagcctgttatttcatttctagtcgaagagctctgaactttgatttttgtttcctcgtaagtacctttctatatgtctatgtttgcagtatcgtatctctaacatcaactacaacataacatcgggtaatcgatatccagtgccagacaaatctgctcctgtgtacataacagttggtgatggaggcaaccaggaagggcttgcttcaaggtaaaggcaaatgaatttatagcggaaaacatactatttgtaatattgttgtttacgcactcctacggttcactcattgttcaaaatcacggtgttgcaggttcagtgatccacagccagactactctgcattcagggaggctagttatggtcattcgatcttgcaactgaaaaacaggactcatgctatctaccagtggaatagaaacgatgatgggaagcatgtacctgcggacaatgtggtgtttcacaaccagtattggtgagtgcagtgatcgataacgcttcaattgttcacaacgctcattggttgcccctgttcgtaatgctcactgaagctagtgatttttttttttgaactagagcctgtaaaggcccccatttcttttactagaaatgatcacattacaaagtctgactgaagctagtgatatgcagaccttcactcttatttctagtttttgttgcctagatagctgattaaaaaggacattgtttggcagggcaagcaacactcgccgcaggaggctgaagaagaagcattttcacttggatcaaattgaggacttgatatccgtgttctaggagttgatctttcagaacactgcatcgcagactttctgaaacggtggcggaatagctctgttgccctttggtcttgagcctcgaccgagtgaggcagaggctctcggctctcatgtaaaggaaccatgcacaggtttgtgggattactattattgagcactgtattgtatgatgaagacaatccgatcagcagatgattagtgctgtacacatgtagcatttcacagccagcgacagtttcgcaatgtgacagtatcttcaataaagtttcaaagggttgtgaaccg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0643900, RefSeq:Os06g0643900