Os01g0581300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0581300 |
|---|---|
| Description |
Similar to Lycopene epsilon-cyclase (Fragment) |
| Version |
NM_001049945.1 GI:115437907 GeneID:4324196 |
| Length |
3718 bp |
| Definition |
Oryza sativa Japonica Group Os01g0581300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:24191871..24195588 |
| Sequence Coding Region |
24191945..24192265,24193158..24193329,24193420..24193555,24193648..24193861,24194030..24194173 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:24191871..24195588 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:24191871..24195588 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagttctccggcggcgcgaccgtgtcggcgccgttcggttgctgccgtgcggcgtggggcgccgcggcggcgggtgcgggggcggagggaaggagcaggagggttgtgccgcgcgcggtggagccgcggcggcgcgggcggtggatggtgaggtgcgtggcgacggagaagcacaaggacgcggcggcgcggcgcggcggcgtggaggtggagttcgccgacgaggaggactacgtcaagggcggcggcggcgagcttctctacgtgcaaatgcaggcgtccaagtccatggacagccagtccaagatctcctccaagctgctgcccatacccgatgaaaattcagttcttgatttggtcatcattggctgcggtccagctggcttatccctagcagcagagtcagctaagaaagggctcaatgttggtctcattggccctgatcttccattcacgaacaactacggtgtgtgggaggatgaattcaaagacctgggcctggagagctgcattgaacatgtctggaaggatactatcgtgtacctagacggtaacaagccaataatgattggccgtgcgtatggcagggttcacagggacttgctgcacgaggagttgctgagacgatgctatgacgctggcgtcacatacctcagctcgaaggtggacaagatcatggaatctcctgatggacatcgggtagtctgttgtgaaggggatcgtgaggtactttgcaggcttgccattgttgcatctggggcagcatctggtaggcttctagagtacgaggttggtggtccgcgtgtttgtgtgcagactgcatatggtgtcgaagtcgaggtggaaaacaatccatatgatcccagcttaatggttttcatggactacagagattgcttcaaagacaaattctcacatcctgagcaaggaaatccaacgttcctctatgccatgcccatgtcatccacacgaattttctttgaggaaacatgcctagcttctaaagaagcaatgccctttgacctccttaaaaagcggttgatgtctcggttggatgcaatgggagttcatattcgaaaagtatacgaggaggaatggtcctacattcctgttggagggtccttaccaaatacagaccagaaaaatctcgcatttggtgcggcagcaagtatggtgcatcctgcaaccggatactcggtggttagatcattgtctgaagctccaagatatgcatctgtgatatctgatatcttgagaaaccgtgtctaccctggagaatatttgcctggaacctctcaaagttccagtccatcaatgcttgcatggagaacattatggccccaagaacggaaacgtcaacgatcattcttcctttttgggctggctttgataatccaactgaataacgaaggcattcagacattctttgaaacctttttccggttgcccaaatggatgtggcgaggattccttggttcgacgctttcttcagtggatctcatactctttgcattctacatgttcacaattgcgccgaaccaaatgcgaatgaaccttgtcagacatctcctctctgatccgaccggctcaacgatgatcaagacctacctgaccttgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MEFSGGATVSAPFGCCRAAWGAAAAGAGAEGRSRRVVPRAVEPR RRGRWMVRCVATEKHKDAAARRGGVEVEFADEEDYVKGGGGELLYVQMQASKSMDSQS KISSKLLPIPDENSVLDLVIIGCGPAGLSLAAESAKKGLNVGLIGPDLPFTNNYGVWE DEFKDLGLESCIEHVWKDTIVYLDGNKPIMIGRAYGRVHRDLLHEELLRRCYDAGVTY LSSKVDKIMESPDGHRVVCCEGDREVLCRLAIVASGAASGRLLEYEVGGPRVCVQTAY GVEVEVENNPYDPSLMVFMDYRDCFKDKFSHPEQGNPTFLYAMPMSSTRIFFEETCLA SKEAMPFDLLKKRLMSRLDAMGVHIRKVYEEEWSYIPVGGSLPNTDQKNLAFGAAASM VHPATGYSVVRSLSEAPRYASVISDILRNRVYPGEYLPGTSQSSSPSMLAWRTLWPQE RKRQRSFFLFGLALIIQLNNEGIQTFFETFFRLPKWMWRGFLGSTLSSVDLILFAFYM FTIAPNQMRMNLVRHLLSDPTGSTMIKTYLTL</aaseq> |
| Gene Sequence |
<dnaseqindica>75..395#1288..1459#1550..1685#1778..1991#2160..2303#2393..2500#2589..2685#2769..2900#3053..3185#3304..3469#agtagctttcgcagaggcggcagccaccaccgcctcctcctcctcctcctcatccgacggtgtgcaaccaagcgatggagttctccggcggcgcgaccgtgtcggcgccgttcggttgctgccgtgcggcgtggggcgccgcggcggcgggtgcgggggcggagggaaggagcaggagggttgtgccgcgcgcggtggagccgcggcggcgcgggcggtggatggtgaggtgcgtggcgacggagaagcacaaggacgcggcggcgcggcgcggcggcgtggaggtggagttcgccgacgaggaggactacgtcaagggcggcggcggcgagcttctctacgtgcaaatgcaggcgtccaagtccatggacagccagtccaagatctcctccaaggtaggaggagtagcagtaaataaatcatatcactactccaattttttttgtttgtttatgcatgcctagatgatcttgattttagcagttaattagcattatgcaaggtcgagatctggctttatacaaaacccacaatcaccttgctgccatggttgccgtttacaagaaagaatcaaacacgaaattcatcaacagcatgaatgaaacactgttgcatcgccctgatcacgcgcgtgctacgacgacgggtgtggaatgttgattcacgtgatgctatcacgaattcactccatatcttgaccaaaaaaaaaaaaagagcagcctctggttgcccatgcttgctgctgcctgccatatctctgtggagcttggactattctccatgtctcctgtaatgggagctcacgtcgtcgcctgtacaaaaggtgttaattaggggataagttaagagtatctcatactgttctcaactcaactgctgactaattacaccttcggatgcaacttggaacgtactgttgcattaattattgtctgcttgcaaatttctcagagatgttgaatttgatgaagtgtacgtgcgtcgcatttgcagtccaacatcacacctttgacttgatgtgattcaagcaacaagtgaagtgctaggctaaacacaagcacagttccccgaaatcatgccatttattcttgacacatggacatcctggaaattgttcaaagtttctagactgctaggaatgcgaataacttgtactgaacttttgaaacatttttgtcagcccaatcaggattttttttagtttatttcctgaaactctgcattggaacgaataaataaatggtgtctcaagaaaataaagcacgtgctctgaatctttgtgtgcagctgctgcccatacccgatgaaaattcagttcttgatttggtcatcattggctgcggtccagctggcttatccctagcagcagagtcagctaagaaagggctcaatgttggtctcattggccctgatcttccattcacgaacaactacggtgtgtgggaggatgaattcaaaggtagcatactattttcagcactgaataacattgttgccatcataatttggtacatgatggacttatggctcttgatcttttgctatccagacctgggcctggagagctgcattgaacatgtctggaaggatactatcgtgtacctagacggtaacaagccaataatgattggccgtgcgtatggcagggttcacagggacttgctgcacgaggagttgctgagacggtaaattttcagttagcaatcttgagagtaaacagagtcaggcaaagtgatacaaaattattgatgaaaaattatactctaaaaactgtcagatgctatgacgctggcgtcacatacctcagctcgaaggtggacaagatcatggaatctcctgatggacatcgggtagtctgttgtgaaggggatcgtgaggtactttgcaggcttgccattgttgcatctggggcagcatctggtaggcttctagagtacgaggttggtggtccgcgtgtttgtgtgcagactgcatatggtgtcgaagtcgaggtatgcacaactcctatagaacttactcccctcgagagtttagaatagtttcccttctgtcgtcgtgtttctacgagcattttattcatattgtttcaagctgaaaattttagatatgttatttgggcacatgtcattcatctttcacaatgatttgaaaattttcaggtggaaaacaatccatatgatcccagcttaatggttttcatggactacagagattgcttcaaagacaaattctcacatcctgagcaaggaaatccaacgttcctctatgccatgcccatgtcatccacacgaattttctttgaggtccatatgagaaactttatcacaatttattcctccgactagtattttcccatgcttttgtgttgctgatgataattatttcaagacaggaaacatgcctagcttctaaagaagcaatgccctttgacctccttaaaaagcggttgatgtctcggttggatgcaatgggagttcatattcgaaaagtatacgaggaggtaacaagttatggcttggtgtcactagttgtttctcttgcataggtgaagtggaaacttaacctaaatgctgaactcttgatttcaggaatggtcctacattcctgttggagggtccttaccaaatacagaccagaaaaatctcgcatttggtgcggcagcaagtatggtgcatcctgcaaccggtactaacaaatcctcaatccgtactttcaatttctcttgtatttacaggcaataatataatatttatctgtcaaaaacataggatactcggtggttagatcattgtctgaagctccaagatatgcatctgtgatatctgatatcttgagaaaccgtgtctaccctggagaatatttgcctggaacctctcaaagttccagtccatcaatgcttggtaagcattcttctgatatttattcaattttattgacaagcacaccagtattacaaattggagtacattgcttcagatgagggcagtattttagtataattttggaaatgtcaggaacattttctggtactaattgctatgcggtgttgcagcatggagaacattatggccccaagaacggaaacgtcaacgatcattcttcctttttgggctggctttgataatccaactgaataacgaaggcattcagacattctttgaaacctttttccggttgcccaaatggtaattctactcttgattgcatttgcctctgttttcagtctatttacaaataccattatgtatgacctgaagattgccacccaacaaagtgttcatcactgttctttgttactatcaggatgtggcgaggattccttggttcgacgctttcttcagtggatctcatactctttgcattctacatgttcacaattgcgccgaaccaaatgcgaatgaaccttgtcagacatctcctctctgatccgaccggctcaacgatgatcaagacctacctgaccttgtaaaaccatttcagcagtctacaagaatattaggaaatgtacagttttgtagtttgtacataacatagtgagagccagaggatatgggggttggggggttacttatcatgctagaacaacaaaacactgcaagaattttatgcatgaatttggcaaatggaatagattatgcagaatgggaacacgtgaatacgtgatgcgtgtgctggaacaacaagtaggaggaataaaacccatggattatggatcttg</dnaseqindica> |
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