Os01g0588900

From RiceWiki
Revision as of 18:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0588900

Description

Conserved hypothetical protein 730 family protein

Version

NM_001049974.1 GI:115438023 GeneID:4324445

Length

4079 bp

Definition

Oryza sativa Japonica Group Os01g0588900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24611916..24615994

Sequence Coding Region

24612255..24612350,24612458..24612601,24613353..24613423,24613525..24613624,24614419..24614449
,24615079..24615176,24615684..24615872

Expression

GEO Profiles:Os01g0588900

Genome Context

<gbrowseImage1> name=NC_008394:24611916..24615994 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24611916..24615994 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatggaggctgcggcggagaggagcgccggagcaggggcggcggcgacggcggcgccggagagcggtggcggtggtgcaggggagaggcggtcgcggttcaggcggatctgcgtgtactgcggcagcgccaaggggaggaaggccagctaccaggacgccgccgtcgagctcggcaaggaactggtcgagaggggcatagacctggtctacggcggtggctccatcggcctcatgggcctcgtctcccacgctgttcacgacggtggtcgccatgtcattggggtcatcccgaaatccttgatgcccagagaggtcactggtgagcctgttggtgaagttagagcggtctctggcatgcacgagaggaaggctgaaatggcccggtttgctgatgcgttcattgcactgcctggcggctacgggactcttgaggagttgcttgaggtcatcacctgggcccaactaggaatccacaagaagccggttggccttctgaatgtcgacgggttttatgatccttttctatccttcattgacatggctgtcagcgaaggattcatagcggaggatgcgcggcgcattatcatctcggctccaactgccagggagctagttctgaagcttgaggagtatgttcccgagtacgaggtcggcttggtttgggacgatcagatgccgcacagcttcgcgcctgacctcgagaccaggatcacctcatcctga</cdnaseq>

Protein Sequence

<aaseq>MAMEAAAERSAGAGAAATAAPESGGGGAGERRSRFRRICVYCGS AKGRKASYQDAAVELGKELVERGIDLVYGGGSIGLMGLVSHAVHDGGRHVIGVIPKSL MPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPGGYGTLEELLEVITWAQLGIH KKPVGLLNVDGFYDPFLSFIDMAVSEGFIAEDARRIIISAPTARELVLKLEEYVPEYE VGLVWDDQMPHSFAPDLETRITSS</aaseq>

Gene Sequence

<dnaseqindica>3645..3740#3394..3537#2572..2642#2371..2470#1546..1576#819..916#123..311#gcctcaactcaagcaaaagcctccccctccaattcaatttcctctctctccatctctctcctccaatcgctgcctcgctcacgcacgcgcgctctacctacctgagggcgaggctggtgccgatggcaatggaggctgcggcggagaggagcgccggagcaggggcggcggcgacggcggcgccggagagcggtggcggtggtgcaggggagaggcggtcgcggttcaggcggatctgcgtgtactgcggcagcgccaaggggaggaaggccagctaccaggacgccgccgtcgagctcggcaaggaactggtcaggattcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttttttgatttgattgattgtcctttctccctccctccctcccaaatccgtcataaaaatccaatcttttcattttctacttttctttctttcttccccctccgggcttcgccggccggctcgccggcggcggcggcggcgaccgactctccggctcgccgtggccgtttctctcttggtgcgcgtccctagtatcctaggcagctatagtagtaggttttctagatgagcaaacaaaaccaatcatgattgctggcgagcgcggtgacctcagttgcgtcccgaacggaacaacaatcttacaatttttgcatgcatcaaaacgccaccaccatctcctccctctctcccccaccttttggatttttcttgtcgactcaagagagtagagagaggttgattggtttcttgtttttttacatttccccttttgtttttggttcgtgttggtgcaggtcgagaggggcatagacctggtctacggcggtggctccatcggcctcatgggcctcgtctcccacgctgttcacgacggtggtcgccatgtcattgggtgagtgatccatttgtccatctctctctctctctatctttctctggttgcttgccaggtgagatgtgtgagaatgcatgcgtcgctgggatgataaaaacggcagcttttgatcgccagattgggggtaggaggagtagtaggtgctgagtccctgcccattttcgtctctctttcttgggtctcagtgtggggggggggggggcattttgaatgcatctggggccttttcgcctccgtttccgaaaggctactcgcctgcatgcttgaattgttgtttgtgcagcagcacactccaacttcacttggcctgctcctgcatagctcagctcctgcaatctgctgctgctgctgctgctgctagcttgctagtactagtgctcttctcttctttgctctcattattgtgcagtgtttatttggtccagctccctctctctctctatctatctgtattgctagtgtggtgtagctgtgctgcctgtgcaatagcctgggccttggctttgccagtctctttaccaagggagagaaagcaagcctgcttgttcttactacacctgtttgaccgcttttgtgctaaaaactgatgtgcttttctgtttcctctctctttgtgttcttggcagggtcatcccgaaatccttgatgcccagagaggtgagctgtctactcctggaagctagtaggagtagtactactgctattacacaagctcgatcgatagagatagatataatcttgattgctgtttttaatgtggccgtgctgctccattttgttcggggcgaaattgatgaatgctttcaattcctctccctgctggcttctgctgctgctgctgctgctgtgcgcagctgaaaaataggagttgcaataaagaaccaagttggcatgctgctagtgcttattggggggacatgatgcatttatgctcatcacatgaatctaatgcgcctatccaacagcattgcgtgctgctcttaaatggattttgagctatagtagctgtctaggatgtgccatcgcatttgccttgccttcggataatttactggggcttgcacgtagtagtaagtgcagtaactgggattatttactcttcttgtacgtatctctacttgtactagtactcattcggtagtacaatgtcttaaaaatgggactttcttgattgtcgtggtctttgaccactgcattacgtacgtagaacttgtatttcctgtgtattctaatgtcgatgatgatctcacgctgaacaactctgtgtgccgtagtttgcatccgaatgttgtcagccatgtatttctatggacttttgcattgctagtttcactaaaaaaggtttttaaatatttttctactaggatgatgagcttattaacatgattctgaaagagaaacaagtgtgatgtgtgccggatcctcaatatatactggtttttcgtttgcaggtcactggtgagcctgttggtgaagttagagcggtctctggcatgcacgagaggaaggctgaaatggcccggtttgctgatgcgttcattgcactgcctggtatgataatttagttgctactacgacgtcgtttgcagtgaattttttttgatgctgcatcctaaggatgcaaaatttgacactcttaatttgcgcgacaggcggctacgggactcttgaggagttgcttgaggtcatcacctgggcccaactaggaatccacaagaagccggtaagtaaccaactggttctgattcctctgtatatcttgtactagtaagattcacgaagaaaacgaatggcattattgcgcgataatttggaggccatgtggttgtgcgtgcatgatcccgaattcctttcttgtctctggttgcaattgaggcaaattaataatcgcaaagtcgttggatccattgagatcttgtgctaacatcttgcccttgattatggcttcgtggtgctcccatgtggttggctgaaggttttgccatctagaaaccgaattattgaccaatagtttaagccctctatgatctgcagatcttacagtacattaggcgatagcttggggatcacgagatctgcaccctctattgtttatgcttcctgttaatatgatatatgctttatacttttatgaatgttccaactcatctaatagaatgatgttcgcaggatcttgtacctgtcattttttttaattcaaaaaggaacttatcgtttgcatctatgctaaattaatgacccaatggatctgagcagtgcattaaacctcattcatcatgcctagcaatcagctttgctgatggcccccacaaaattcatatggtgtcgtgtaactgtattaactaggatagtgatccttcttggatccatgtttttagaggaatgctcgtcttttaatcgcgcgggatttcccttattgctctcaaatgcacattctctactcctagctctaacagctcctcaatatttaccaggttggccttctgaatgtcgacgggttttatgatccttttctatccttcattgacatggctgtcagcgaaggattcatagcggaggatgcgcggcgcattatcatctcggctccaactgccagggagctagttctgaagcttgaggtaaaaaaaactcacagcttgcactgttccattttcgacacattgccctacatggcaatttccttctcataacaccaagtttgtatgtacccttttggaaatttcaggagtatgttcccgagtacgaggtcggcttggtttgggacgatcagatgccgcacagcttcgcgcctgacctcgagaccaggatcacctcatcctgatctctcggctctggccctattcttacccaagcttctaaccggcggacgacgataccttcttctcgtgccgaagccgaatatgatcctggaggaagtttgtttttctcagccaggggaaagtaacatccactaaccgaaaagatttagccaaaggcggcccctagctcgggtctgccgatttgttgttttggcaaaatatgtcaattgggacagtatttagcattagcagtgcctcctcaatgctgttcttttggcccccctccctcctcactagctagaagaaggaatatatgtatatgcaagtaatattagtagcatctgtctatcttgatcttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0588900, RefSeq:Os01g0588900