Os06g0645600

From RiceWiki
Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0645600| Description = Peptidase S1 and S6, chymotrypsin/Hap domain containing protein| Version = NM_001064728.1 GI:115469187 GeneID:4341654...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0645600

Description

Peptidase S1 and S6, chymotrypsin/Hap domain containing protein

Version

NM_001064728.1 GI:115469187 GeneID:4341654

Length

3234 bp

Definition

Oryza sativa Japonica Group Os06g0645600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27232718..27235951

Sequence Coding Region

27232718..27233495,27234204..27234275,27234366..27234402,27234507..27234565,27234666..27234950
,27235308..27235609,27235641..27235771,27235864..27235951

Expression

GEO Profiles:Os06g0645600

Genome Context

<gbrowseImage1> name=NC_008399:27232718..27235951 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27232718..27235951 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtcgtcgtcgtcgtcgtcgcctcgccggcgagctctcctcctgctgttcgtcttcgcgtcgtcgttctttgccagcgctgcagcggcggtgtcgcggacgaactcgtcgtcggcgttcgtgctggcggcggcgcagacgcggcggaaggatccactccgcgggctgaggtactacaccggcggctggaacatcagcgacaagcactacctcgccctcgcaatgcgatcaccttggtgttctactgttcttcctgcctggttcttgatgctgacgccgtcgagttttgctatgcttgtcgccgcgcgcgcgcagtcggtcgggttcagcgcggcgccggtgttcgttgtcgcggccgtctggttcgcctccctcgcgctcgccgcgttcgtcgcctgctgctgccgctgctgctgctctggcgccggcggcggcaacggcaacggcggttactcctactcccgcgccatcttcgccgtctccctcgcgctcctcctcgtcttcaccgccgtcgccataatcgggtgcatcgtgctgtacgacgggcaggggaagttccacgggagcacgacggcgacgctgcggttcgtcgtcaaccagtcggacggcgcggtggcgagcctgcgcggcttcagcggtttcatcgaggcggcgaaggcggccgccgtggagaaggccaccctccccgccgacctccaggggaaggtcgacgacgtcgtgcgccgggtggacgcctccgccgacgacctcgccgcgcgcaccaccactaactcccgcaagatccgcaccgcgctggagaccataaggacaatcctcatcgttgttgccgccgtgatgctggccttggcgtttcttgggcttgtgttctccctgtgcgggctgaaatcactagtatacaccttggtgatttttggatggattctagttactgcaacattcatactgtccggcacttttcttctcttgcacaacgcggtgggcgacacgtgcgtggccatggacgagtgggtgctccacccgcagggccacacggcgctcgacgacatcctcccctgcgtcgacgccgccgcgacgtcggacgcgctccgccggagcaaggaggtcaactaccagatcgtctccgtgctcaacaacctcctcgccaccgtcgccaacgccaacgtccccgcgtcgtcgccgccgtcgccgccggccagctaccgccagtccgggacccccgtgccgctcctctgcaacccctacaacggcgacctctccgaccgcgcctgcgccgccggcgaggtcgccgccgccgacgcgccgcgggcgtggcggggctacgtgtgccgcgccacgggggcggcgccgtcgtcggaggtgtgcgccaccaccggccgcctcacgccgacgatgtacgaccagatggtcgccgccgccaacgccagcgccgggctgacccagtacggccccgtcctcgccgacctcgccgactgctcgtacgtgcggcgcgcgttccaggcggtgacggcggcgcactgcccggggctgcggcggcacagcggcagggtgtaccaggcgctgctcgccgtgtccgtcgccgtggcggccgccgtggccgcgtgggtggcgcactcacaggagcggcggcggcggagcgagacgaggcggttccaggtgtcgccgtacaggttccccatcgaggagaagtcgctgctcaagagcccccggcggccgtaccggcgaggcgacagcggcaggatggcgaggtag</cdnaseq>

Protein Sequence

<aaseq>MVSSSSSSPRRRALLLLFVFASSFFASAAAAVSRTNSSSAFVLA AAQTRRKDPLRGLRYYTGGWNISDKHYLALAMRSPWCSTVLPAWFLMLTPSSFAMLVA ARAQSVGFSAAPVFVVAAVWFASLALAAFVACCCRCCCSGAGGGNGNGGYSYSRAIFA VSLALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSGFIEA AKAAAVEKATLPADLQGKVDDVVRRVDASADDLAARTTTNSRKIRTALETIRTILIVV AAVMLALAFLGLVFSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAM DEWVLHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSVLNNLLATVANANVPAS SPPSPPASYRQSGTPVPLLCNPYNGDLSDRACAAGEVAAADAPRAWRGYVCRATGAAP SSEVCATTGRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCP GLRRHSGRVYQALLAVSVAVAAAVAAWVAHSQERRRRSETRRFQVSPYRFPIEEKSLL KSPRRPYRRGDSGRMAR</aaseq>

Gene Sequence

<dnaseqindica>2457..3234#1677..1748#1550..1586#1387..1445#1002..1286#343..644#181..311#1..88#atggtgtcgtcgtcgtcgtcgtcgcctcgccggcgagctctcctcctgctgttcgtcttcgcgtcgtcgttctttgccagcgctgcaggtgagagggttcttgagtagttttgtttctttgatgaaatggaaggcgtggagattgatcgatcgatcgatggtggcgtgccgtgtttgcagcggcggtgtcgcggacgaactcgtcgtcggcgttcgtgctggcggcggcgcagacgcggcggaaggatccactccgcgggctgaggtactacaccggcggctggaacatcagcgacaagcactacctcgccgtgagctcctcatttccgtgataaatttcagctcgcaatgcgatcaccttggtgttctactgttcttcctgcctggttcttgatgctgacgccgtcgagttttgctatgcttgtcgccgcgcgcgcgcagtcggtcgggttcagcgcggcgccggtgttcgttgtcgcggccgtctggttcgcctccctcgcgctcgccgcgttcgtcgcctgctgctgccgctgctgctgctctggcgccggcggcggcaacggcaacggcggttactcctactcccgcgccatcttcgccgtctccctcgcgctcctcctcgtcttcaccgccgtcgccatgtaaaaccatttctcctctccaagccatttcatattacaaagtacaaaactgttcagattttttttctagtataagtttgatcaaatttatacaaaaagtttagcaacatctgcttcattaaaactagcattaaatatatttgttttgcattagaaatgatactatatctctttataaatttagtcaaatctaaatatattttgataatatatttgtttgtggaaatgctactatatctttttataaatttagttaaatttaaataagtttgataaataaaatcaaaacgacctataatacgaaacggacggagtaatttctaattttggacgccgccgccgtcgctgtgggtgcagaatcgggtgcatcgtgctgtacgacgggcaggggaagttccacgggagcacgacggcgacgctgcggttcgtcgtcaaccagtcggacggcgcggtggcgagcctgcgcggcttcagcggtttcatcgaggcggcgaaggcggccgccgtggagaaggccaccctccccgccgacctccaggggaaggtcgacgacgtcgtgcgccgggtggacgcctccgccgacgacctcgccgcgcgcaccaccactaactcccgcaagatccgcaccgcgctggagaccatgtatgtgtgagattttcttggtggacgccatgacctcgtcacttccatcatcaagaagatctcgtttgacattctgtttgccttcttctcgtgatcgcagaaggacaatcctcatcgttgttgccgccgtgatgctggccttggcgtttcttgggcttggtgagcataaagatttctttgctggttttggtgaattttgtcaaattcgtttgtttctgtattcgagtaaataattgacaaattcttgttcgattttggtgcagtgttctccctgtgcgggctgaaatcactagtatacacgtaagtacaacatcacagaacgtacatagacttgtatatagtacaaaatttttttttactgcaagtttgtaaccttcagttcttctgcagcttggtgatttttggatggattctagttactgcaacattcatactgtccggcacttttcttctcttgcacaagtaagttgttctcccttgttactgtcttgttaaatatattgcttgattaaatataatttgaaaaaaaggtgagattttgatattctaaaatggattgagtaaatttagtcggcaaaaaaaaacaaatttactgaagtggaatattctgcttctgaaaagttaaaatttttttgtatgaaccagacgtactggaacactttgcatctcagtctttacattgactagttacatgcttgtatgttataatgggtcaaccccatataattaggggtagattaggagtcggtatgtcggtgtgttaataggctaggtctatataattagagataaatgatactctttcggttctaaaatatagtaacttttagtttttagaattcgtttcaaaatataacaacttcttcattaacattctcttctcaaccaatcacaatactccaccgttcaattttcccacataccttcatttcttctccaatcacaacacttctccatttagttctatcaactttcttaataactacgtctaacttttaaaatatttatattctgaaacgtagggggagtattacttttcacgtacgcactgaacacgttaggacggtgggatgagaggagaacgactatattttaagatagcagatatcagttaaatctgaatcattaagacactaacacgagctctgctctgcttcgtcgtgctcgcagcgcggtgggcgacacgtgcgtggccatggacgagtgggtgctccacccgcagggccacacggcgctcgacgacatcctcccctgcgtcgacgccgccgcgacgtcggacgcgctccgccggagcaaggaggtcaactaccagatcgtctccgtgctcaacaacctcctcgccaccgtcgccaacgccaacgtccccgcgtcgtcgccgccgtcgccgccggccagctaccgccagtccgggacccccgtgccgctcctctgcaacccctacaacggcgacctctccgaccgcgcctgcgccgccggcgaggtcgccgccgccgacgcgccgcgggcgtggcggggctacgtgtgccgcgccacgggggcggcgccgtcgtcggaggtgtgcgccaccaccggccgcctcacgccgacgatgtacgaccagatggtcgccgccgccaacgccagcgccgggctgacccagtacggccccgtcctcgccgacctcgccgactgctcgtacgtgcggcgcgcgttccaggcggtgacggcggcgcactgcccggggctgcggcggcacagcggcagggtgtaccaggcgctgctcgccgtgtccgtcgccgtggcggccgccgtggccgcgtgggtggcgcactcacaggagcggcggcggcggagcgagacgaggcggttccaggtgtcgccgtacaggttccccatcgaggagaagtcgctgctcaagagcccccggcggccgtaccggcgaggcgacagcggcaggatggcgaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0645600, RefSeq:Os06g0645600