Os01g0602400

From RiceWiki
Revision as of 18:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0602400

Description

Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment)

Version

NM_001050033.1 GI:115438269 GeneID:4324604

Length

2783 bp

Definition

Oryza sativa Japonica Group Os01g0602400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25330024..25332806

Sequence Coding Region

25330138..25330563,25330672..25331056,25331519..25331763,25332164..25332715

Expression

GEO Profiles:Os01g0602400

Genome Context

<gbrowseImage1> name=NC_008394:25330024..25332806 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25330024..25332806 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcttggagggtggctgttgatgtgggctccggcctcatcgccaacaatcctcgtggcgttcggtctcctcttcggcctcgtcctcgcgtggcaggccggcctccagctccaccgcctgtggtggcggccgcggcggctggagaaggcgctgcgggcgcggggcctccgcggctcgtcctaccgcttcctcaccggcgacctcgcggaggagagccggcggaggaaggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcatcgagccgttcctccacgacgccgtcgtcaggccggagcagcactacggcaagccgtgcatcacctggctcggcccgacgccggaggtgcacgtcaccgatcccgagctggccaaggtcgtcatgtccaacaagttcggccacttcgagaagatcaggttccaggcgctatcgaagctgctgccccagggcctctcctaccacgagggcgagaagtgggccaagcacaggaggatcctcaacccggctttccagctcgagaagctcaagctcatgctgccggtgttttctgcgtgctgcgaggagctgatcagcaggtggatgggggccattggttctgatggctcgtacgaggtggattgctggccggagctcaagagcctcaccggagatgtcatctcgcgcaccgcgttcggaagcagctatcttgaaggaagaaggatcttcgagctgcagggcgagctatttgagcgtgtaatgaaatccgtcgagaagattttcatcccgggttacatgtatttgcctactgagaacaaccggaagatgcatcaaattaataaagagatcgaatcgattctaaggagtatgattgggaaaagaatgcaagctatgaaagaaggtgaaagcacaaaagatgatttacttggcatattgcttgagtcaaacatgagacacacggaagagaatagtcaatcaagccaaggcttgacaatcaaggatatcatggaggaatgcaagttgttctactttgcaggagcggatacaacatcagtgcttctcacatggaccatattgctattaagcatgcaccccgagtggcaggatcgtgcaaggaaagagatcctaggactatttgggaagaacaaacctgagtacgatggcttgaacaacctcaaaattgtgacaatgatcctctatgaggttcttaggttgtacccaccgttcatcgagcttaagcggagaacatacaaggagatgaagataggaggcgtcacttaccctgctggtgtcatcattaatcttcccgtgctgttcatccaccatgatctgaaaatctggggaagtgacgtgcatgagttcaaaccagagaggttctctgaggggatctctaaggcatctaaggatccgggtgcgttcctcccattcggttggggaccgcgaatctgcatcggccaaaacttcgcgttgcttgaggccaagatggcgttgtgtctgattcttcaacgcttggagtttgagcttgcgccaacgtacactcatgcgccacatactatgataactttacacccgatgcacggtgcacagattaaaattagagctatatga</cdnaseq>

Protein Sequence

<aaseq>MVLGGWLLMWAPASSPTILVAFGLLFGLVLAWQAGLQLHRLWWR PRRLEKALRARGLRGSSYRFLTGDLAEESRRRKEAWARPLPLRCHDIAPRIEPFLHDA VVRPEQHYGKPCITWLGPTPEVHVTDPELAKVVMSNKFGHFEKIRFQALSKLLPQGLS YHEGEKWAKHRRILNPAFQLEKLKLMLPVFSACCEELISRWMGAIGSDGSYEVDCWPE LKSLTGDVISRTAFGSSYLEGRRIFELQGELFERVMKSVEKIFIPGYMYLPTENNRKM HQINKEIESILRSMIGKRMQAMKEGESTKDDLLGILLESNMRHTEENSQSSQGLTIKD IMEECKLFYFAGADTTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYDGLNNL KIVTMILYEVLRLYPPFIELKRRTYKEMKIGGVTYPAGVIINLPVLFIHHDLKIWGSD VHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLEAKMALCLILQRLEFEL APTYTHAPHTMITLHPMHGAQIKIRAI</aaseq>

Gene Sequence

<dnaseqindica>2244..2669#1751..2135#1044..1288#92..643#acatccttcttccactgcataagcttcttttcacttcattccccctgttcacttatacttacaggctgatcacggccagtagtagtaagtaatggttcttggagggtggctgttgatgtgggctccggcctcatcgccaacaatcctcgtggcgttcggtctcctcttcggcctcgtcctcgcgtggcaggccggcctccagctccaccgcctgtggtggcggccgcggcggctggagaaggcgctgcgggcgcggggcctccgcggctcgtcctaccgcttcctcaccggcgacctcgcggaggagagccggcggaggaaggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcatcgagccgttcctccacgacgccgtcgtcaggccggagcagcactacggcaagccgtgcatcacctggctcggcccgacgccggaggtgcacgtcaccgatcccgagctggccaaggtcgtcatgtccaacaagttcggccacttcgagaagatcaggttccaggcgctatcgaagctgctgccccagggcctctcctaccacgagggcgagaagtgggccaagcacaggaggatcctcaacccggctttccagctcgagaagctcaaggtaccatttcttgcaaccaatttacatattgaatttgagagaaaaagttgcactctcttatgcatgcaaaaatattaaatgttacatactgttctagtagtagctattcttacgtttcatcgtatattataagatgctttgattatttttaagtccaacttctcttatcttgattaagttttgaaaaaacataacaatattttcaacacaaaatgaacaaaaatatattcaatgttggattcaataaaattaatttagtgttataaattttgctataactttttattattaaactttagaaagtccgatataggaaaaaaaacttataatataaaatagaagtattagccaatttttttctttgtctgatcattgaaatgtcgtcggagaatgtgtgcagctcatgctgccggtgttttctgcgtgctgcgaggagctgatcagcaggtggatgggggccattggttctgatggctcgtacgaggtggattgctggccggagctcaagagcctcaccggagatgtcatctcgcgcaccgcgttcggaagcagctatcttgaaggaagaaggatcttcgagctgcagggcgagctatttgagcgtgtaatgaaatccgtcgagaagattttcatcccgggttacatgtgagaatttaatacttaaaagtaccgagtaatttaatttccctggttcttaacttaatatcgagagcatatttatttggttacactgagcagtcttaagtacgtatcttatttctctcagtcaaaatatcccctatcattggaaatatatatatatctccttgttacttgcgggatacatgatctccaaaaagagagtaaaaaaaataatcggattgaaaatccagtttagtatttgatattgagtttttctttagtctttgagagctacgggtaattaatattagtcgggagggacatatccctctctagtctatatacctcctaatggttagaaaagttttgacatcgtcgaccatacaattttgtcctaatccgttcagctagtttaaatttttaattaccactcaaataaggatgtgacgacctcaaattattgattggatatattctccatttcaggtatttgcctactgagaacaaccggaagatgcatcaaattaataaagagatcgaatcgattctaaggagtatgattgggaaaagaatgcaagctatgaaagaaggtgaaagcacaaaagatgatttacttggcatattgcttgagtcaaacatgagacacacggaagagaatagtcaatcaagccaaggcttgacaatcaaggatatcatggaggaatgcaagttgttctactttgcaggagcggatacaacatcagtgcttctcacatggaccatattgctattaagcatgcaccccgagtggcaggatcgtgcaaggaaagagatcctaggactatttgggaagaacaaacctgagtacgatggcttgaacaacctcaaaattgtcagtatcttgtaggatttaattgataataccatttcgttcacatgagtttagatagatgtaattaacttgtaagtactaaatctcattgatttgtgcgtcatgcaggtgacaatgatcctctatgaggttcttaggttgtacccaccgttcatcgagcttaagcggagaacatacaaggagatgaagataggaggcgtcacttaccctgctggtgtcatcattaatcttcccgtgctgttcatccaccatgatctgaaaatctggggaagtgacgtgcatgagttcaaaccagagaggttctctgaggggatctctaaggcatctaaggatccgggtgcgttcctcccattcggttggggaccgcgaatctgcatcggccaaaacttcgcgttgcttgaggccaagatggcgttgtgtctgattcttcaacgcttggagtttgagcttgcgccaacgtacactcatgcgccacatactatgataactttacacccgatgcacggtgcacagattaaaattagagctatatgatcgtttcagatcctagcatgtttttttcgaggacctagcgtgttttattagtacaactcttggttgtgagttgtgatatttgtacctttggaataaaagtggcataggagatat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0602400, RefSeq:Os01g0602400