Os01g0636500
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os01g0636500 |
|---|---|
| Description |
Similar to Polygalacturonase PG2 |
| Version |
NM_001050201.1 GI:115438772 GeneID:4326573 |
| Length |
4132 bp |
| Definition |
Oryza sativa Japonica Group Os01g0636500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:27269793..27273924 |
| Sequence Coding Region |
27269877..27270344,27271484..27271615,27272048..27272224,27272313..27272357,27272443..27272650 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:27269793..27273924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:27269793..27273924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagctcagagtaaaaggcctcggcctccttcttctccttgtcttgcttgctctttgctccaccatcgacgtctgcgatgcaagaagaggcaagcattggcgacctaggagctcaccgagctcctctctgctaaggaacaagggcaaaggaaagaagggcagctccaaccggcagcatggaagcaaccggccgagcccgaagccgccactcagcccgccaccgagtcctggtaatggcaaaggataccagagcccataccagccaagcccaagtccaagcccgaatgcacctgtaagcccaagccctgtcaatgggagtggacatgcaagtcccaagtctccaactccaagctgtggaaaaggtaatcagccaccatcgcggccaacaccaacatcaccacagggcgcagtgtttaacgtggttgattttggagccaaaggcgatggcgtctccgatgataccaaggcctttgaagcagcatgggctgcagcgtgcaagcagggagcatctacagttgtcgtaccatcagaacttgagtttcttgttgggccaatctcattctctgggccttactgcaaaccaaatattctgttccagctggatggaacaattgtagccccaaccagtgctaaagcttggggttctggtttgcttcaatggattgagtttaccaaactaaatggagtatcaattcaaggcaatggcatcataaatggtagaggacaacaatggtggacctattcagacatagatgacgacgaagatgatgacacacagtacgatgtggagtttgaaaggatgccacaagttaaacctacagcattgagattctatggtagtttcaacgttgtagtagctggtatcactattgtcaacagctcgcagtgccatctcaagtttgacagctgtcaaggagtgatggtccatgacgtaacaatatcctccccagaaaacagcctcaacactgatggaatacacctgcagaactctaaagatgtcagcattcatcataccaacctggcttgtggtgatgactgcgtctccattcaaacaggatgcagcaatataaatatacacaatgtgaattgtggacctggccatggaatcagcattggaggcctaggccgggacaacacaaaagcatgtgtctccaatgttactgtaagagatgtcaacatgttcagaaccatgactggtgtcagaatcaagacctggcagggtggcttaggcttggttcaagatgtacggttctcgaacatccaagtctcagaagtccaaacaccaatcatcatagaccagttttactgtgacaaaagaacatgctcaaatcaaacatcagcagtggcagtatcaggcgttcagtatgagaacatcagaggaacatttactatcaagcctgttcattttgcatgcagtgacagctcaccttgttcagggataactcttactggagtacaactcaggcctgtccaaataccccactaccgcctaaacgaccctttctgctggcaagcttttggggagctctacactccaacagtccctccaattgcttgcttgcaccttggaaaacctgctgggaacaacttacagtcataccacgacttatgttga</cdnaseq> |
| Protein Sequence |
<aaseq>MKLRVKGLGLLLLLVLLALCSTIDVCDARRGKHWRPRSSPSSSL LRNKGKGKKGSSNRQHGSNRPSPKPPLSPPPSPGNGKGYQSPYQPSPSPSPNAPVSPS PVNGSGHASPKSPTPSCGKGNQPPSRPTPTSPQGAVFNVVDFGAKGDGVSDDTKAFEA AWAAACKQGASTVVVPSELEFLVGPISFSGPYCKPNILFQLDGTIVAPTSAKAWGSGL LQWIEFTKLNGVSIQGNGIINGRGQQWWTYSDIDDDEDDDTQYDVEFERMPQVKPTAL RFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTISSPENSLNTDGIHLQNSKDV SIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDV NMFRTMTGVRIKTWQGGLGLVQDVRFSNIQVSEVQTPIIIDQFYCDKRTCSNQTSAVA VSGVQYENIRGTFTIKPVHFACSDSSPCSGITLTGVQLRPVQIPHYRLNDPFCWQAFG ELYTPTVPPIACLHLGKPAGNNLQSYHDLC</aaseq> |
| Gene Sequence |
<dnaseqindica>85..552#1692..1823#2256..2432#2521..2565#2651..2858#3172..3362#3565..3960#agccacacactctatgctctctatctgcttcctaagcacatacaagcactactctccatacagcaagcagatacaaacagaaggatgaagctcagagtaaaaggcctcggcctccttcttctccttgtcttgcttgctctttgctccaccatcgacgtctgcgatgcaagaagaggcaagcattggcgacctaggagctcaccgagctcctctctgctaaggaacaagggcaaaggaaagaagggcagctccaaccggcagcatggaagcaaccggccgagcccgaagccgccactcagcccgccaccgagtcctggtaatggcaaaggataccagagcccataccagccaagcccaagtccaagcccgaatgcacctgtaagcccaagccctgtcaatgggagtggacatgcaagtcccaagtctccaactccaagctgtggaaaaggtaatcagccaccatcgcggccaacaccaacatcaccacagggcgcagtgtttaacgtggttgattttggagccaaaggcgatggcgtctccgatgataccaaggtcagcattcccctctaaaatgctctgtttcaacttgcaaactatccatgctatctaaaattgtcaagcatcatgcatttttctccaagccaggagtttctcgatggcaattctttgttcgaattgtttatcatctcttcaatacgttagcaagggctccatgctgatcattcccataaaactcgtcgtaaagactttctgagattagaattcagcattcatgtggtatttgggggaaaagggatgccggttcagagtagttttatcttcaaaaatttggacaaaagcatgcgcgcatagatggaatgatctaccagaaccatcacagcatgtggcgatgtacatatcacatgatttccagagcagagcccagggaaattgtcactagtgccgtactttctcttaagtcagtttatgcatgaccgcatctctggcaattgatttgttcgctattttggattattctctgcatgtgttgccagcaacttgttttgttagcaaatttggattgttcaatttttctgacatgatcaattgcatctcatgcaagtttagctggtcactgttgctgttcttttattattatttgaggagtcatagaagacaataaagaaggcaccaaataagtcaagggttctaaaggaaaaccatttataaggatttttgtttgtgtcgactgccgagaaaagcacatcaagcaaactactgtaatcttgacattcttgtccttttctgtagaagagcaaagtgcttctcccatgaaccaggaaaccctttcttatgaaggttttggaaaactaattcctctgtttctttggaaaaaggcaatagaattggtttttttatgcagaaacaatacttaaaatttgcatcataataatcctcaaacaatgtgcatcggtttattttcagcaaaagacttcagctctctcttatcctttccattttttgcttggctgcatgctacttctcatgccagcatggcaacaaagaccatagaattttcgttagggatctgaggtatatatgggtgtgttttgtttctgggttcatatttagcatactacagtctagaggacacaggacagtggcttcaaatatcaaagtttgagcaaaatgtgtcttgcacccacatgcaggcctttgaagcagcatgggctgcagcgtgcaagcagggagcatctacagttgtcgtaccatcagaacttgagtttcttgttgggccaatctcattctctgggccttactgcaaaccaaatattctgttccaggtaactatactctagccgaaaatttcattctacccaaatatgttttcccctgattattatatagcttctttttagtaaaaatgcaaaccctaaatcagcattaacactacataactcttgcttcaaaaaggataatactagatttatacagactctgaatgcccacttcattatacatatgccctcctgagtacttgtatttgggaataaactagacattcatgataggaataaaaaactccactacttatactttgcagataagcctgagaatcttgttttgatgagcatttgtcattttgtttataaaagaaacgaaggaaatttccaactaattttatcagtggacaagttcaacaatccacaaacttgacagagttaattagtggaacacaaaacataatgatgttaagtgacgtgtttattttgtagctggatggaacaattgtagccccaaccagtgctaaagcttggggttctggtttgcttcaatggattgagtttaccaaactaaatggagtatcaattcaaggcaatggcatcataaatggtagaggacaacaatggtggacctattcagacatagatgacgacgaagatgatgacacagtaagatctcaccatccatctagcatatcatcatatacaaacaattcaaaagatggttcatttagtcacttaccttggatacttccagcagtacgatgtggagtttgaaaggatgccacaagttaaacctacagtaagaagatcactatatcaaatcacatttgtaattgtctggttgcacacgaaaaccaagtcataagaactttactctgatgcaggcattgagattctatggtagtttcaacgttgtagtagctggtatcactattgtcaacagctcgcagtgccatctcaagtttgacagctgtcaaggagtgatggtccatgacgtaacaatatcctccccagaaaacagcctcaacactgatggaatacacctgcagaactctaaagatgtcagcattcatcataccaacctggcttgtggtactacctccataactaaactgaagcagaacttagagcctatatgaatctaaagtacatcaaaatgcttagcgattttcttttactaaaatcctccatacatgaaacaagggcaagagacatgcgtatgctcaataaggcctagaaacaactgaaatcctgtctccctgtcctgtaaattctgcagtgtataggacaggagggtaccaggaaaaacttcaagagtactgaactatgaagctatcttttgcagttactcaacaaaagcagaaaaacatagttaacatgtattttttggtcgtatatgatgcaggtgatgactgcgtctccattcaaacaggatgcagcaatataaatatacacaatgtgaattgtggacctggccatggaatcagcattggaggcctaggccgggacaacacaaaagcatgtgtctccaatgttactgtaagagatgtcaacatgttcagaaccatgactggtgtcagaatcaagacctggcaggtaagcacatccctttataggtacaaacaaatcctacttaataggacagtcattacattgtcacaaaagaaaaggataaatatatcatcttcataaacttggacaatcagatgtgctaagaaatatatatgagaaaaaaaatgatgatcctaagtgaagacctaatacttactgagctaaacaaattaaactctccttgcagggtggcttaggcttggttcaagatgtacggttctcgaacatccaagtctcagaagtccaaacaccaatcatcatagaccagttttactgtgacaaaagaacatgctcaaatcaaacatcagcagtggcagtatcaggcgttcagtatgagaacatcagaggaacatttactatcaagcctgttcattttgcatgcagtgacagctcaccttgttcagggataactcttactggagtacaactcaggcctgtccaaataccccactaccgcctaaacgaccctttctgctggcaagcttttggggagctctacactccaacagtccctccaattgcttgcttgcaccttggaaaacctgctgggaacaacttacagtcataccacgacttatgttgatacacaaaagtaccttcatccattgattggtgcttatccatgagtggtcgtgaaacttccgacccctttgcaccattgcttggcggtgtgcatatatacagttattctgatgccattgttactatagcacgtgtcacccttcaattaaagaaaagatagatacttccatatg</dnaseqindica> |
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