Os06g0649000

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0649000| Description = Similar to WRKY transcription factor 28| Version = NM_001064751.1 GI:115469233 GeneID:4341678| Length = 1601 bp| De...")
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Gene Name

Os06g0649000

Description

Similar to WRKY transcription factor 28

Version

NM_001064751.1 GI:115469233 GeneID:4341678

Length

1601 bp

Definition

Oryza sativa Japonica Group Os06g0649000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27387009..27388609

Sequence Coding Region

27387324..27387770,27387852..27388274,27388382..27388609

Expression

GEO Profiles:Os06g0649000

Genome Context

<gbrowseImage1> name=NC_008399:27387009..27388609 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27387009..27388609 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>actagctcatgcgcatttcggctctcgccttcttcgccttcttctcctcctcctcctgttcttgattttcagtatattcaattcatggattcgtggattgagcagacttccctgagcttggacctcaacgtcggcctgccgtcgacggcgaggagatcatcggctccggcggcgccgattaaggttctcgtggaggagaacttcttgtccttcaagaaggatcacgaggttgaggcgctggaggcggagctccggcgagcgagcgaggagaacaagaagctgaccgagatgcttcgggcggtggtggccaagtacaccgagctgcagggacaggtcaacgacatgatgtcggcggcggcggcggcggcggtcaacgccgggaaccaccagtcgtcgacgtcggagggcggctcggtgtcgccatcgaggaagcggatccgtagcgtcgacagcctcgacgacgccgcccaccaccgcaagccatcccctccgttcgtcgccgccgccgcagccgcggcctacgcctcccccgaccagatggagtgcacgtcggcggccgccgccgccgccgcgaagcgcgtcgtccgcgaggactgcaagcccaaggtctccaagcgcttcgtccacgccgacccctccgacctcagcctcgtggtgaaggatgggtatcaatggcggaagtacgggcagaaggtgacgaaggacaacccgtgcccgcgagcctacttcaggtgctcgttcgcgccggcgtgcccggtgaagaagaaggtgcagcgcagcgccgacgacaacaccgtcctcgtcgccacgtacgagggcgagcacaaccacgcccagccgccgcaccacgacgccggcagcaagaccgccgccgccgccaagcactcacagcaccagccgccaccgagcgccgccgccgccgtcgtccggcagcagcaagagcaggcggcggcggccgggccgtcgacggaggtggcggcgaggaagaacctggccgagcagatggcggcgacgctgacgagggaccccgggttcaaggcggcgctcgtcacggcgctctccggccggatcctcgagctctcgccgaccaagaactga</cdnaseq>

Protein Sequence

<aaseq>TSSCAFRLSPSSPSSPPPPVLDFQYIQFMDSWIEQTSLSLDLNV GLPSTARRSSAPAAPIKVLVEENFLSFKKDHEVEALEAELRRASEENKKLTEMLRAVV AKYTELQGQVNDMMSAAAAAAVNAGNHQSSTSEGGSVSPSRKRIRSVDSLDDAAHHRK PSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDLSLV VKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHN HAQPPHHDAGSKTAAAAKHSQHQPPPSAAAAVVRQQQEQAAAAGPSTEVAARKNLAEQ MAATLTRDPGFKAALVTALSGRILELSPTKN</aaseq>

Gene Sequence

<dnaseqindica>840..1286#336..758#1..228#actagctcatgcgcatttcggctctcgccttcttcgccttcttctcctcctcctcctgttcttgattttcagtatattcaattcatggattcgtggattgagcagacttccctgagcttggacctcaacgtcggcctgccgtcgacggcgaggagatcatcggctccggcggcgccgattaaggttctcgtggaggagaacttcttgtccttcaagaaggatcacgaggtgcgtggagagattgacagctgcgacgacatcgatgagaatttgattgggaatattgaaaaaaagtttgattaattagttgttcgatcttgtgtccatcgatccaggttgaggcgctggaggcggagctccggcgagcgagcgaggagaacaagaagctgaccgagatgcttcgggcggtggtggccaagtacaccgagctgcagggacaggtcaacgacatgatgtcggcggcggcggcggcggcggtcaacgccgggaaccaccagtcgtcgacgtcggagggcggctcggtgtcgccatcgaggaagcggatccgtagcgtcgacagcctcgacgacgccgcccaccaccgcaagccatcccctccgttcgtcgccgccgccgcagccgcggcctacgcctcccccgaccagatggagtgcacgtcggcggccgccgccgccgccgcgaagcgcgtcgtccgcgaggactgcaagcccaaggtctccaagcgcttcgtccacgccgacccctccgacctcagcctcgtaagcaacgaaacaattagattaatccattgatgaggtctcctcgtaattaaccaacaattggttttgtaaaaccttcaggtggtgaaggatgggtatcaatggcggaagtacgggcagaaggtgacgaaggacaacccgtgcccgcgagcctacttcaggtgctcgttcgcgccggcgtgcccggtgaagaagaaggtgcagcgcagcgccgacgacaacaccgtcctcgtcgccacgtacgagggcgagcacaaccacgcccagccgccgcaccacgacgccggcagcaagaccgccgccgccgccaagcactcacagcaccagccgccaccgagcgccgccgccgccgtcgtccggcagcagcaagagcaggcggcggcggccgggccgtcgacggaggtggcggcgaggaagaacctggccgagcagatggcggcgacgctgacgagggaccccgggttcaaggcggcgctcgtcacggcgctctccggccggatcctcgagctctcgccgaccaagaactgatccatcgttagaacgccgatgaactttgctcgatttagctgagatcgatcgatcaatttacacggtaaaattttagagttgatcgatttgcatggctttgatcggagttaggctagagagagagaggattaactgtgtatatttagtgattgattttaattagctcgctctacacgtgccaaggtggcagtttaagcaaaacgtacgataattcgttgcaatttgtaattcagctagaagattagtgtattcatggagatctattcagagtctcccagatatatatatagagagagagatagtagcattgatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0649000, RefSeq:Os06g0649000