Os01g0642900

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os01g0642900

Description

Single-strand binding protein/Primosomal replication protein n family protein

Version

NM_001050226.1 GI:115438822 GeneID:4326564

Length

1933 bp

Definition

Oryza sativa Japonica Group Os01g0642900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27597401..27599333

Sequence Coding Region

27597726..27597799,27598090..27598190,27598709..27598935,27599035..27599307

Expression

GEO Profiles:Os01g0642900

Genome Context

<gbrowseImage1> name=NC_008394:27597401..27599333 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27597401..27599333 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccacggcctcctccttcctcgcccgccgcctcctcctcacccgccgcgtcctttcctcccccctccgccccttctccaccactgactcctcctcatcctcctcctcctcctcttcctccgacgactcccgtgcgggatctgatgcgggacccgaccccgagcagcagcaaccgccaccagcgggccaggatcagcaggccgccgcccggccgcgcgccggcgacacccgtcccctcgagaacggccttgaccccggaatctacaaggcgataatggtggggaaggtggggcaggagccgatacagaagcggctgaggagcgggagaacggtcgtgctgttctcgctcggcaccggcggcatccgcaacaaccgccgcccgctggaccgcgaggagccgcaccagtacgctgaacgatgctccgtgcagtggcaccgcgtctgcatctacccggaacggctcggcagcctcgcgctcaagcacgtcaagaccggttctgttctttatctggaagggaatcttgagacgaaagtgttttctgatcctataactggactggttcggcgcataagagaaatagctgtgcgctcaaatggccgtctcttgtttcttgggaatgattgtaatgcgcccaagttaggtgaagccaagggcgttggctacttctga</cdnaseq>

Protein Sequence

<aaseq>MAATASSFLARRLLLTRRVLSSPLRPFSTTDSSSSSSSSSSSDD SRAGSDAGPDPEQQQPPPAGQDQQAAARPRAGDTRPLENGLDPGIYKAIMVGKVGQEP IQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPHQYAERCSVQWHRVCIYPERLGSLA LKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRSNGRLLFLGNDCNAPKLGEA KGVGYF</aaseq>

Gene Sequence

<dnaseqindica>1535..1608#1144..1244#399..625#27..299#ctcttgctctcaagcggcgtgcaaccatggcggccacggcctcctccttcctcgcccgccgcctcctcctcacccgccgcgtcctttcctcccccctccgccccttctccaccactgactcctcctcatcctcctcctcctcctcttcctccgacgactcccgtgcgggatctgatgcgggacccgaccccgagcagcagcaaccgccaccagcgggccaggatcagcaggccgccgcccggccgcgcgccggcgacacccgtcccctcgagaacggccttgaccccggaatctacaaggttggaactccttgatcccctctgggttttgattcggtgcgagctgacagcctgattggggattttatttttttgtgtgtgtgggtgagaatcgcgaaggcgataatggtggggaaggtggggcaggagccgatacagaagcggctgaggagcgggagaacggtcgtgctgttctcgctcggcaccggcggcatccgcaacaaccgccgcccgctggaccgcgaggagccgcaccagtacgctgaacgatgctccgtgcagtggcaccgcgtctgcatctacccggaacggctcggcagcctcgcgctcaagcacgtcaagaccgggtgagccctctgttgcctctgcagacgagctgtcacgtaaacgtagtgaagggccaattcctgatgtttgagcgtgacaacctctgatttcgtatgttggattagattcttaactacaatggttcaactgcatagctctgttgcaattgatttgttggtgagtaaagcatctgttatgattatacttgatatgattggtacttggtttccttggggtagaatttggtatattcctttagctctgcatgagtggggattggtagatgcctttttcttttgtgtcgatctattgacttgaacttactctacctctcatttgtgattacatcactgttctactgtattactcaattagtaagaagctaaatatattagtctatctttcgcagttgtcaatttgcatataagtgacatggtaataatattttaaggttttagctttgtacagttcctttttttaattctttggttgattaactccactaacacaagtaaattgtaccatttcaacatttcagttctgttctttatctggaagggaatcttgagacgaaagtgttttctgatcctataactggactggttcggcgcataagagaaatagctgtgcgctcaaatggtatgtttattgcaccattgattttgacttgtggcaaatattttcttgaaaacatgtactagtgcgttgcccatacctcatgttcttttaacaagttctgtctagttctcaaaaagcaatgctcataccactacagtacgttaagtagacttttcgctgtttccttttatttttcacgtacaaactacaaagtaatgtcatgttgcatatgagcattcagcgatactgttcaatatttctatcgatgttgtttagtcggagtatgatactttttttttccatacgaacaggccgtctcttgtttcttgggaatgattgtaatgcgcccaagttaggtgaagccaagggcgttggctacttctgaaactgaggtccactcgacatcaaggtatatcagttgataaaattgatttaaattagaggtatctcaactgtgcttagctttaagcgttcaacgtatggtgaagatctcagtagtggaccagctttatggaacaaatacagttggacatcattgtcgaaaccctctaataattgaacaactgattgtactgtataacttgattttgacaaaacaacatatgtggctgtgctatttattttagttctcccaaaatttcttttgaccttttgggtcagagaagtttgtgaatttgagcttttctacaataaaatggatctgtttactc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0642900, RefSeq:Os01g0642900