Os06g0649700

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0649700| Description = Region of unknown function DM13, Skeletor domain containing protein| Version = NM_001064753.2 GI:297606276 GeneID:434...")
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Gene Name

Os06g0649700

Description

Region of unknown function DM13, Skeletor domain containing protein

Version

NM_001064753.2 GI:297606276 GeneID:4341681

Length

5883 bp

Definition

Oryza sativa Japonica Group Os06g0649700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27440337..27446219

Sequence Coding Region

27440337..27442977,27446173..27446219

Expression

GEO Profiles:Os06g0649700

Genome Context

<gbrowseImage1> name=NC_008399:27440337..27446219 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27440337..27446219 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccctcctcctcaccctcctcctcctcctctgcctggcttcaccgccgctggcggcggcggcggcggcgtgcgggacgaacactagcctggtggggtacgaggcggacctgtggatgtcgcagcaccagctccgcggccgcgtcgaggtgctcgacggctgctcgttccgcgtcgcggcgctcgacctcctcgcggggtccgcctccgcgcggtggtggcgcgccgaggggcccgacctcgactccctcgcccgaggcgcgcccgccgcgggcgacccgctcaaccgcaccttcctctccgagtccctcgtgttccgcctcctccctggcgtgtcctggccgctcgtccccgtcctcgccgccttcgaccccctcacctcctccctcttcggcttcgtccgcctctccaacgattcctccgccgattccgaggcgcccaccatgttcgactcgtgcgcccagctctcgccgcggctgcgcgtgcgctggacgctccacggcacctccgactccatcgacatcggcctcgaggcggccgtcgggtcggagtactacatagcgttcgggtgggcagcgcccggcgcgcccgagccgtccatgatcggcgccgacgtcgccgtcacgggcttcacggaggacggcctccccttcgccgacgactactacgtcaccaagtacagcgagtgcacggtgcgcgccgacggcgccgtcgagggcgtttgcccggacacgatctacgagcagggcaacgacaccgccgccggcgcggtcaacaacacgcggctggtgtacggccaccgccgcgacggcgtctcgttcgtccggttctcgcggccgctcgtgtcgccggacaagaagtacgacgtgccggtcaacgccacggcgaacatgacggtgatctgggcgatcgggctgctccggccgccggactcgctccagccatactacctccctctgggccacggcgcgccggccgggacggcgttcgggttcgccacgctcaacgtgtcggcgagcggcgggtgcgtcgggccgctcgacgccgaggacaaggaggaccaggacaggatcacggcggagcggaacacgccgctggtggtcaccgccgggccgtcgctgcactaccccaacccacctaacccggacaaggtgctctacatcaacaagaaggaggcgccgctgctcaaggtggagcgcggcgtgcccgtcaccttctccgtcgaggccggccacgacgcgccgctgtacatcacctccgacgccgtgggcggcaacgccacgtcccggaacgccaccgaggtcgtcttcgccggcggcgccagggccgagggcgtgccggcggcgccggcggagctcgtctggctccccgaccggaacacgcccgacgtggtgtactaccagtcgctctacgaccccaagatggggtggaagatccaggtcgtcgacggcggcctcagcgacatgtacaacaacagcgtcctcctcgacgaccagcaggtgaccttcttctggacgctctccggcgactccatcaacatcgccgcccgcggcgagcggaagagcggctacctcgccgtcggcttcgggagcgccatggtgaacagctacgcctacgtcgggtggatcgacggcaacggcacgggccacgtcgcctcctacttcatcgacggcgaggacggcgcgggcgtgcacgagacgagcgagaacctcacccacacgaggtgccggtcggagaacggcgccatcgtgttcgagctcacgcggccgctgtcgccgtcgtgctccggcagggtggagtgcaggaacatcgtcgacccgacgacgccgctgcgggtgatctgggcgatgggctcgcagtggtcgtctggccagctgaccgtgagcaatatgcactccatcaccagcaaccgccccgtccgcgtcctcctcctcgccggcacggcggaggcggaggaggagctgcgcccggtgctcgccgtccatggattcatgatgttcgtcgcgtgggggttcctcgttcccggcgggatcatggcggcgaggtacctcaagcatctgaagagcggcgacctatggttccaggcacacacctacctgcaatcctcagccatggccgtcatgttcttgggattgctcttcgcgatcgctgagctccgtggcttctccttcaaatccacgcacgcaaagatcggcaccgcggcatttgttctcgcttgtctgcaaccgattaatgcttatctccgaccgcatttgctcgcggagaatggcgaaattctgccaatgaagaacagggtgatctgggagtatctgcacattatcaccgggagatcagctgtggtagtcggcgccattgcactcttcaccggcttgcagcatcttggtgacaggtatggcagcaagaacatcaaggggttaacatgtgggttgatcctgtgggttgtgggtgtcacattggtggttgtttacctcgagttcatggcggcgaggcgaagaagaggcggcggcgcagatgacctttcgggtaaatgggtgcttggcaacactgatgaagatgattcagttgatcttttgcagtccactaaaatggagtctgattcgattgaaccaatggaggtgcagcttgagccactgaaagaaaaggtatcctgcagttctgcatgcataaactgccttcatggttag</cdnaseq>

Protein Sequence

<aaseq>MAPLLLTLLLLLCLASPPLAAAAAACGTNTSLVGYEADLWMSQH QLRGRVEVLDGCSFRVAALDLLAGSASARWWRAEGPDLDSLARGAPAAGDPLNRTFLS ESLVFRLLPGVSWPLVPVLAAFDPLTSSLFGFVRLSNDSSADSEAPTMFDSCAQLSPR LRVRWTLHGTSDSIDIGLEAAVGSEYYIAFGWAAPGAPEPSMIGADVAVTGFTEDGLP FADDYYVTKYSECTVRADGAVEGVCPDTIYEQGNDTAAGAVNNTRLVYGHRRDGVSFV RFSRPLVSPDKKYDVPVNATANMTVIWAIGLLRPPDSLQPYYLPLGHGAPAGTAFGFA TLNVSASGGCVGPLDAEDKEDQDRITAERNTPLVVTAGPSLHYPNPPNPDKVLYINKK EAPLLKVERGVPVTFSVEAGHDAPLYITSDAVGGNATSRNATEVVFAGGARAEGVPAA PAELVWLPDRNTPDVVYYQSLYDPKMGWKIQVVDGGLSDMYNNSVLLDDQQVTFFWTL SGDSINIAARGERKSGYLAVGFGSAMVNSYAYVGWIDGNGTGHVASYFIDGEDGAGVH ETSENLTHTRCRSENGAIVFELTRPLSPSCSGRVECRNIVDPTTPLRVIWAMGSQWSS GQLTVSNMHSITSNRPVRVLLLAGTAEAEEELRPVLAVHGFMMFVAWGFLVPGGIMAA RYLKHLKSGDLWFQAHTYLQSSAMAVMFLGLLFAIAELRGFSFKSTHAKIGTAAFVLA CLQPINAYLRPHLLAENGEILPMKNRVIWEYLHIITGRSAVVVGAIALFTGLQHLGDR YGSKNIKGLTCGLILWVVGVTLVVVYLEFMAARRRRGGGADDLSGKWVLGNTDEDDSV DLLQSTKMESDSIEPMEVQLEPLKEKVSCSSACINCLHG</aaseq>

Gene Sequence

<dnaseqindica>1..2641#5837..5883#atggcgcccctcctcctcaccctcctcctcctcctctgcctggcttcaccgccgctggcggcggcggcggcggcgtgcgggacgaacactagcctggtggggtacgaggcggacctgtggatgtcgcagcaccagctccgcggccgcgtcgaggtgctcgacggctgctcgttccgcgtcgcggcgctcgacctcctcgcggggtccgcctccgcgcggtggtggcgcgccgaggggcccgacctcgactccctcgcccgaggcgcgcccgccgcgggcgacccgctcaaccgcaccttcctctccgagtccctcgtgttccgcctcctccctggcgtgtcctggccgctcgtccccgtcctcgccgccttcgaccccctcacctcctccctcttcggcttcgtccgcctctccaacgattcctccgccgattccgaggcgcccaccatgttcgactcgtgcgcccagctctcgccgcggctgcgcgtgcgctggacgctccacggcacctccgactccatcgacatcggcctcgaggcggccgtcgggtcggagtactacatagcgttcgggtgggcagcgcccggcgcgcccgagccgtccatgatcggcgccgacgtcgccgtcacgggcttcacggaggacggcctccccttcgccgacgactactacgtcaccaagtacagcgagtgcacggtgcgcgccgacggcgccgtcgagggcgtttgcccggacacgatctacgagcagggcaacgacaccgccgccggcgcggtcaacaacacgcggctggtgtacggccaccgccgcgacggcgtctcgttcgtccggttctcgcggccgctcgtgtcgccggacaagaagtacgacgtgccggtcaacgccacggcgaacatgacggtgatctgggcgatcgggctgctccggccgccggactcgctccagccatactacctccctctgggccacggcgcgccggccgggacggcgttcgggttcgccacgctcaacgtgtcggcgagcggcgggtgcgtcgggccgctcgacgccgaggacaaggaggaccaggacaggatcacggcggagcggaacacgccgctggtggtcaccgccgggccgtcgctgcactaccccaacccacctaacccggacaaggtgctctacatcaacaagaaggaggcgccgctgctcaaggtggagcgcggcgtgcccgtcaccttctccgtcgaggccggccacgacgcgccgctgtacatcacctccgacgccgtgggcggcaacgccacgtcccggaacgccaccgaggtcgtcttcgccggcggcgccagggccgagggcgtgccggcggcgccggcggagctcgtctggctccccgaccggaacacgcccgacgtggtgtactaccagtcgctctacgaccccaagatggggtggaagatccaggtcgtcgacggcggcctcagcgacatgtacaacaacagcgtcctcctcgacgaccagcaggtgaccttcttctggacgctctccggcgactccatcaacatcgccgcccgcggcgagcggaagagcggctacctcgccgtcggcttcgggagcgccatggtgaacagctacgcctacgtcgggtggatcgacggcaacggcacgggccacgtcgcctcctacttcatcgacggcgaggacggcgcgggcgtgcacgagacgagcgagaacctcacccacacgaggtgccggtcggagaacggcgccatcgtgttcgagctcacgcggccgctgtcgccgtcgtgctccggcagggtggagtgcaggaacatcgtcgacccgacgacgccgctgcgggtgatctgggcgatgggctcgcagtggtcgtctggccagctgaccgtgagcaatatgcactccatcaccagcaaccgccccgtccgcgtcctcctcctcgccggcacggcggaggcggaggaggagctgcgcccggtgctcgccgtccatggattcatgatgttcgtcgcgtgggggttcctcgttcccggcgggatcatggcggcgaggtacctcaagcatctgaagagcggcgacctatggttccaggcacacacctacctgcaatcctcagccatggccgtcatgttcttgggattgctcttcgcgatcgctgagctccgtggcttctccttcaaatccacgcacgcaaagatcggcaccgcggcatttgttctcgcttgtctgcaaccgattaatgcttatctccgaccgcatttgctcgcggagaatggcgaaattctgccaatgaagaacagggtgatctgggagtatctgcacattatcaccgggagatcagctgtggtagtcggcgccattgcactcttcaccggcttgcagcatcttggtgacaggtatggcagcaagaacatcaaggggttaacatgtgggttgatcctgtgggttgtgggtgtcacattggtggttgtttacctcgagttcatggcggcgaggcgaagaagaggcggcggcgcagatgacctttcgggtaaatgggtgcttggcaacactgatgaagatgattcagttgatcttttgcagtccactaaaatggagtctgattcgattgaaccaatggaggtgcagcttgagccactgaaaggttgataaattttctttttcagtatacataagaggattttagatcagattctttatagatagtgaaaaatggagttatatatgtctcattaagggattatagttaaagttatctgttagtacctggaattggagagagcttccaatttggcttcataagggtgtagaataggtttttatttttcatcttatttggacttaggtcaaccttttcttttaaaacctcctaacttggtagtgactatggtctgtatgtatatttgtacaattttggtatagctaaaagaaaaggctacactttctttaattgttaactttgtgattcatacctgacgatgttttacatcagaccaatgctgcaactgtacaaagtaattgagggctatctgcagtttgaaattgtcttgtccgtgctatgtttgagctttgtttcttcagaaaggtaagtttgacatttgtgcatgccaattcatatgctgatatgcatttcagcatttggtagtttggcaccaatgggagatggcccaacgttaggcctttctgcatcctgaaatgcctgctcaactcaactgatgtgatagacaaactgaaagcaacacactttatgccacattactagaaatgcatatagtttcatgctaaagcaactgtgctaacctttttttatcagccatacacggattgcttcatgccgtcctgacacgcacatctgttctaacttccaaggttgttgtctacatgtcttccaacttcaactaatgtactttagtttgttgaccctgtggattgtccatttacaacgatgagttggctctaaacaaaaacaatttcaggtactactctctacaatctcctttgttgttttgcagcgtattatattgtgttttaagtgatatggacgtcaagctgcatgttaggtctatatttgttttagttgggtatcctccattcagatctgggatcccttggtagttggcttgccaccgttgccaggaagagagaaaaatatgcaggactagtgcattgcctgtccttgcattggagtctgaagccttcttttcttcttttttgttattgtgatggatcatggacatgggcctttgaagaaatgtgattagttctaattttggttgaggtggatgattctgtagtttggtaaggcccaaactagactctgaaaatgaatagattgtagaagagagtgtcatttgatgggcccaattcctgaacaagtgaaccacactatgtttatcagtctgaactactgttcagttggaactccaaaaccaatctgtgttagattcgagcaacacagaactgtgttcttttaggaaatccatgtttgaaatcaatactatggtaatgattccgttggtgttagagaaatccatgcatgaaattaatacctcatctttgagaaacaataacaaaaaaaaatgtctatctacctagtgagaatagcgccataagcagtccctagttgtacttgtatcctccctgctccctgtactctgttttcgtttcttttcttctcctgccctcctgatgctgtttcttttcagcttgttttctctgcacttcggtgaccttgtacagttctcccttttcttaatataaaaccagcaaagctggcataggtttcaaaaataaaatatctatcaatttactccggatggttattttatcctgaccatgatagagaaatttacttcacggttaaactgcatattcccaccatccaaaaaacttaaacctaggagaggatgtgacatttttttttagtacaatgaatctcgataaagggctgtccagattcattgtactaggagatatcacattcttgactaggttgatttttttaggacggagggagtatgctgaacatggacaggaagattcataatctcctggtttcacctctaatttttggaagcataaggagttgtacacaagattcatacctccaatcatatgccattgcatttgcataggacccattttggatcacttttgacctaccccttggctttcaactgaactggttctggtttttttgctgatgaagtcgacctgcatttactgaatcatgaacactcctcgactgccacaatttggttaagtccactccactccagcctgcctgctgcctggtttgatggagatggtccctgcaatgcacaacctgcatgatgcagaatttgaggagcaggccacatgttgcttcctggcttatctggctatgcttatccctgaatttagattaccatttcattatctttcatattcttgtgagattttttttagtcgaactgacctaactttagtgatgtctacttgcaatttttgctgcttgcaaaattacacaatagtaactcttatttttacagtgttctctactaaaagtattgtagtagtaccagcattattgcaagtagaagtgatacgggtaatatatttatgagttataaacttataggtgctagaaaattattctactagcagtaatttatgtggtgctataaatacataggatcccttggatgagaaaaagattaagaaaaattctatattgatagtagagattaccgtaaaatttgtccttatggtaaggtcaggtcgactaataagtcaaatatggttgtgcttatccatgatggtattggattttttaggtgaggttggactattagccatgaacatattatatgaactcaaataatagtagtacttcctccatttcacaatgtaagtcattctagcattttctatatttatattgatgttgatgaatctagatagatatatatgtctagatttattaatatcagtatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagaagactatttatttatccacatattatatgaactcggatagaacaaaccaaaacctgtcttgctctggcaagacagtggcacaataacgacacattaaacaaacgacaacactaaaaaaatgtgaaaaatccaacagacagtttgcagtagggactgcttgtgacctactcctagtacttagaaacaaatacttccagaatctcagattgtcattcttactgtgtacaagcgtccgtgtttcttgtgtttcaattttcaaatagagatactgtaaaccagaccaatcacatgtattgtggctgtatgtcctcgcagaaaaggtatcctgcagttctgcatgcataaactgccttcatggttag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0649700, RefSeq:Os06g0649700